Basic Information

Gene Symbol
-
Assembly
GCA_963576865.1
Location
OY756415.1:9637694-9661037[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.2e-13 8.4e-10 40.0 0.0 3 89 243 316 241 316 0.88

Sequence Information

Coding Sequence
ATGGTTGGCAACCTGGGGCCTGGGATATGCGCCTGGCTGAATTCATTGTTCCTCCTTAACAAGGAGGATGAAGTCCTAGCAATCAACGACAAAGTGGTCCTCCGTGCAGAAGACTTGCTCAGCTGGGTTTGCACTGGAGAAGGCTGGCGGTGGGGGCTGCGCGCCGTGTGGAGGGGCGCGTGCGCCCCACCAGCCGAGCCGCGGCACACTACGGCCCTCCACCACACGAACATAGACTTCACCGATGTGGAGAACGAGAAAAATGCCATAGTGGACACAGAGAGCCCTGGCGTGGTGGTGTTCTCGTACCCCCGGTACTGTCGGTACCGGGCGCTCCTGTCAAGGCTTGAGGGCATCCAGGGTGACTGGCTCCGGGACTCGCTAGTCGCCGCGCTGGGAGGGTACGCTGCGCCCACGCACAACACCAGGATACTGTACTGCAAGGACACATTCGAATACCCTGAGCTGGAAGGCCACGAGTTTGTCTGCAACCACCTCGCGCCGAAGCTGAAGGGCCGGCCGAGggggcgccgccgccgccccccCCGCGCCGGCTCGCCCTCCCCCACCCCCTCGCCCGAGCCGCCGGCCTCCGCCTCGCCGGAACCGGACTCGGACGACCAGAGGAGTATGCCTACTGTCGCAACCCCCCGCCGGCTGTCGCTTCGCAACGGGCCGGATAAGCACAGCGACGAGGAGTACGAGAAGAGGGACAGTGCGGAGGACCGCGCCTTCATGGCCTCTCTGAGGCAGTTCTATAGAGAGAGGAATGAGACTATGCATTCGGGGCACACCTTAAAAGACTTGTCGCTGCGCGCGCTGTTCGAGgcggtgcgcgcgcgcggcggctaCGAGGCCGTGTGCCGCCTGCGCCTGTGGCGCGCGCTGTGCGCCGCGCAGCCCGCGCGCGCGCGCAGGCACTACGAGAGGTTCCTCCTCCCGTACGAGAAGCATTCGCGCCGCAACGGACTCTCTCGCAACGGACGCCTACTGGAGCCGCGAACCGTGGCCACCATCGACGTCACGGGCTCGCCCCCCCCGCCCCCACCCCCACCGCACCGGGAACTAACTCTGGAACAGCCGAAGAGGTTGAGGACGCCGTCACCTGTGCACGTAGACAATGAAACAGGAGAAACTAAGGACGACCTGAACCTTATATCGAAGCCAGCCGAAGAACTTAATAGGGAGTTCCTGGAATCGCTCCCGAAAGACGAGAAAGctttgaaaataaatgtcaaacCTGTAGAGAAGCTAATTGAGACGAACGCGAAGGAAGAGAGCCGACCGAGCGAAGAGCGAAAACTCGACTcgagcgagcggagcaagcTGAGCGAAACGAGCAGTGCGATGCTGAATGAGCTGGCGCACAAGTTAAATTTAAATAGCGCGGCGGGCCCGTTCGTGGCGGTGGCGCCCGAGACGCGCGCGAACGGGCACGATGCGCACGCGCCGCCGCAAACGGAACAGctaaAAAGTAGCCGTCCAGCGGGTCGTAGCTCACTGCGTGCGGTGCGCGTCAAGCCGACGCGGCCGCAACACACGCCCGCTAACACgcCCCCCATTAGCTCAATGCGGGCGGAGTCGTCTACGTCCCCCCCGCAGGCGCCGCCGCCCCACCACCCCCCACCTCTGACCAACTTCGGCATCCACCACCCGCCTGCCGTTAACAACACTCACAGCGACGATGAAATTGTTGAGGTCCCCTACAAACCAAAAACGCCAGAAATTATCGACCTAGACGAGTACCCTGAGAGCCCACAGTCGGTCAAGAAGAAAAAACTCGACATCCTAAAAGAACGAGGGCTAGAAGTCACGGCCATCCCCACGTGGCCCCTCCAACCCCCAATCGCGCCCCTCATCAGCCCCGGCCCCATGCTCCTAAACCCCGCGGTCCAACACCAAATCATGACGCAGGCGCAGATATTTCAAATGTACAATATAATTCCGCCAAACTATAACGGCGCTCAACCACCCAAAGTGATCCAAGCAACCAGCCTATTCGGCTCTTCTGGCCCCGAAAAGACTGTATACGGCAACCCCAAAGACCCCTTCATGCCTCCCCCCCACATTCTCCACGGCACCCCTGTCAAACATCAAAGAAATATCCCCACGACAACGACCCCTCCTCAGGATATTTTAGATTTAACTTGCAGAAGTCCTACCCAGAAGCCAGCAGTTGAGATCGTCAGAATACCATCAGCGCCATCTCCCTCTAAAAGTTCCCCTCAGAATCTGAGTAAGAGTTATACCCTGATCGATGGTAAAGCAGTAGTTGGATCAAATTTAGAAATTACTCTTGTAAACCCAAGGTCCCAGACACCAAATAAGAACAGACCCCCTCAGAAGAGATCATCCAATGGCAAATTTGTGTCAAGCAAGACACCTACGCCTCCGAAAGAAAATCCAAAGCAGTTCCCTTCTCCGTCTGGTCTGAAGAAGAATCCAATCGTGGTGCCCAATTACCAGATAAATTCAAGGGATAATGTGTCTCCTACCAGCTCTACTGGCTCCAGAGACAGCCAATCCAACGCCACCAGTGTGTTCAAACCCTCCAGCCTGGCGCAGATCCTAGAAATGCAGAAGTCTGTACCCAGCGTGCCACTTATGGACCCGGTGTACATGAACGCGTTATACAACAGCCTCGGCCACTTGGACCAACGGCAGCTGTCTATGTATAGAGACCTCATGGCCAACCAGTTCAGGTATACAGGGCTACTAAACCTGGGCGTTGGCACACCCACGACTAAGAATTGA
Protein Sequence
MVGNLGPGICAWLNSLFLLNKEDEVLAINDKVVLRAEDLLSWVCTGEGWRWGLRAVWRGACAPPAEPRHTTALHHTNIDFTDVENEKNAIVDTESPGVVVFSYPRYCRYRALLSRLEGIQGDWLRDSLVAALGGYAAPTHNTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRRPPRAGSPSPTPSPEPPASASPEPDSDDQRSMPTVATPRRLSLRNGPDKHSDEEYEKRDSAEDRAFMASLRQFYRERNETMHSGHTLKDLSLRALFEAVRARGGYEAVCRLRLWRALCAAQPARARRHYERFLLPYEKHSRRNGLSRNGRLLEPRTVATIDVTGSPPPPPPPPHRELTLEQPKRLRTPSPVHVDNETGETKDDLNLISKPAEELNREFLESLPKDEKALKINVKPVEKLIETNAKEESRPSEERKLDSSERSKLSETSSAMLNELAHKLNLNSAAGPFVAVAPETRANGHDAHAPPQTEQLKSSRPAGRSSLRAVRVKPTRPQHTPANTPPISSMRAESSTSPPQAPPPHHPPPLTNFGIHHPPAVNNTHSDDEIVEVPYKPKTPEIIDLDEYPESPQSVKKKKLDILKERGLEVTAIPTWPLQPPIAPLISPGPMLLNPAVQHQIMTQAQIFQMYNIIPPNYNGAQPPKVIQATSLFGSSGPEKTVYGNPKDPFMPPPHILHGTPVKHQRNIPTTTTPPQDILDLTCRSPTQKPAVEIVRIPSAPSPSKSSPQNLSKSYTLIDGKAVVGSNLEITLVNPRSQTPNKNRPPQKRSSNGKFVSSKTPTPPKENPKQFPSPSGLKKNPIVVPNYQINSRDNVSPTSSTGSRDSQSNATSVFKPSSLAQILEMQKSVPSVPLMDPVYMNALYNSLGHLDQRQLSMYRDLMANQFRYTGLLNLGVGTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-