Basic Information

Gene Symbol
Xbp1
Assembly
GCA_963576865.1
Location
OY756391.1:20245483-20247919[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.7e-18 1.1e-14 55.2 8.3 2 52 44 94 44 96 0.97
2 3 0.00013 0.26 12.4 0.6 33 55 89 111 89 116 0.91
3 3 2.5 4.9e+03 -1.3 0.1 16 39 134 157 129 161 0.80

Sequence Information

Coding Sequence
ATGAGCACACCGATTATCATTACTGTACCCAACAACTACTTGACGGTGGATGAGATGGACTCGAAGGTTGTAGTCGATGTTTCATCACAGCCACCGTCAAGAAAGAGGCGTCTGGACCATTTATCATGGGAGGAGAAGATGCAAAGGAAgaaactaaaGAATCGCGTGGCGGCGCAGACGTCACGAGACAGGAAAAAGGCTAAAATGGATGAGATGGAACATAGGATATCGCTTCTTGCAGAGGCCAATGAGCGGCTCACGAGTGAGGTGGCGAGTTTGAAGGCGTTGAACGAGCGTTTGTTGAGCGAGAACGCATCGCTTCGCAGCGAGGCGGCGGCGCGGACCGTCGCGGGGGCCCCAGGACCAGCAGAGTCTACTCCTCGGCAGAAGGAGGGGCCCCCGCAGGCGATCCGCGCGGCGCGCCTACTGCTGGCGATGTGCCTCCTCTCGCAGACATCCTCGCTCACCTCGACTCAGAAGAGTACCTCGACACCCTCAATCAACTTGCAGAGTCCCTCCTCAAAGAAATTGATGCAGGTTCTGCAGGAGCGGTTGAAGATGTCGCAGACCGGGTCACTGGAGAGCGCGCTAAAGGAACTCAAGTGGTGGGGGCCGCAGCAGAGCAACTGGAATCCGGTGAAAGTGTCGTCGTAG
Protein Sequence
MSTPIIITVPNNYLTVDEMDSKVVVDVSSQPPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEHRISLLAEANERLTSEVASLKALNERLLSENASLRSEAAARTVAGAPGPAESTPRQKEGPPQAIRAARLLLAMCLLSQTSSLTSTQKSTSTPSINLQSPSSKKLMQVLQERLKMSQTGSLESALKELKWWGPQQSNWNPVKVSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_01281040;
80% Identity
-