Afus031916.1
Basic Information
- Insect
- Anania fuscalis
- Gene Symbol
- -
- Assembly
- GCA_950371115.1
- Location
- OX493352.1:6748227-6765157[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.03 2.9 9.5 1.2 1 23 334 357 334 357 0.92 2 18 0.018 1.8 10.2 1.7 1 23 592 615 592 615 0.92 3 18 0.19 18 7.1 0.3 2 23 640 661 639 661 0.96 4 18 0.0013 0.13 13.8 0.0 2 23 684 705 683 705 0.94 5 18 0.00019 0.018 16.5 0.7 1 21 709 729 709 730 0.95 6 18 0.075 7.3 8.3 1.6 1 23 828 851 828 851 0.88 7 18 4.5 4.3e+02 2.7 0.1 2 23 876 897 875 897 0.95 8 18 0.061 5.9 8.6 1.3 1 23 919 941 919 941 0.97 9 18 0.0001 0.01 17.3 0.3 1 23 945 967 945 967 0.95 10 18 0.0086 0.84 11.2 1.6 1 23 972 995 972 995 0.96 11 18 0.0071 0.69 11.5 1.9 1 23 1083 1105 1083 1105 0.95 12 18 0.04 3.9 9.1 0.2 2 23 1130 1151 1129 1151 0.96 13 18 0.00073 0.071 14.6 0.5 1 23 1173 1195 1173 1195 0.98 14 18 0.0008 0.077 14.5 3.2 1 23 1199 1221 1199 1221 0.99 15 18 0.078 7.6 8.2 3.8 1 23 1226 1249 1226 1249 0.95 16 18 4.8 4.6e+02 2.6 0.4 1 14 1256 1269 1256 1274 0.82 17 18 0.13 13 7.5 2.4 1 22 1286 1307 1286 1309 0.81 18 18 0.00033 0.032 15.7 0.5 1 23 1315 1337 1315 1337 0.96
Sequence Information
- Coding Sequence
- ATGGATGAAGTTGAAGATGTTCTTGATGGCGAAGTAAACAAAATATACGGAAGATGCCGATGCTGCCTCGACCTTGGTTACGTGAAGAATATGTGGACGGAATACTTGTGGGAAGGTTCGCAAGAGATCTATGGTGAAATGCTGATGGAAACCTTTTCCATTGCtTGGGATTCGTCACCAAACGGCAAAGAGCAGATATGCAGCTCGTGCGTAACTCGGTTGCGAGACGCGCACATGTTCAAGCGGGAAGTGTTGGCCAGTGAGCACCTTCTCACAGAAGGAGTTCTAGATTCTGAACCGGAATCCATAAAAGAAGAAAGGTTGTCTGATTTGGACCAATATGAGGCCACCACAGAGGCTGTCATCGAAGACTCGGAATGCAAGGAAGACGAGCAGGAGACAGTAGCTTCTGAAGAGGAATACTTGATCGAAGAAGATGAAGAGTACGAAGAAGTTGAATATTTAGAGGAGGAATTGGTCTCAGgGCAAGTTTTTTTCTTCTCAGAAACCAAATCCAATGCGGACCCAAACACAGATTCTGAAGGGCCGTCCCAAGCGCGAACCAGACCGAAACGGAAGAGAACGCACGGGTTGAACACGCGCAACTAcagGAACTACTCCGAAGACACTCTACGTCGAAGCATCGAGGCGGCGCTGAATAGCGACAAGTCCATATCCGAGGTGGCCGCGATGTACGGCGTGCCGCGGAAGACGCTCACCGCCAGAGTGTATAACGCTAAACACAATCCGAAGCCTGATGATCCGGGAAACTCTCCGGACGAACGGAACCGGGAAAAACCATTAACGGAGGATGTCAGAGATAACGCCATGACCCTAACCCGGTCGGATGCAACACAAGGTGACCCAAGCACCTCTCTGGACAAGGAACCAAGGCCGAAaaaacagtttaatttaaatcagaTCGACAAGTACAGAGATAACGTCAAAACAATCCTGACTTGGTCGAATGCGACGCCCTTCCGATCCCAAGGCGCAGCTTATTTCTGTTTCTTCTGCAGAAAGGAGTATCCCTCACCTGGCGACCTCAAAACTCACACAACTCTAACCCACACAGACAAATCTAAAGCCTACAACTTTAAAAATGTCTACGATTTCAGTCTCAGAATCGATATAACTGAGGAATCGAGCCGGACAAAACGGGTTAACGCCCGTACCTCCCTCAATCGGTCAAACGCTAAAGAAGCTGATACGGAAAATTTTCCAGAGGAATCGAGCCGGAAAAAACGGGTGAACGCCCGTACCTCCCTCGATCGGTCAAAGGCTACAGAAGCTGATACGGAATATTTTCCTGAGGAATTGAGCCGGAAAAAACGGGTTAACACCCGTACCTCCCTCAATCGGTCAAACGCTACAGAAGCTGATACGGAATATTTTCCAGAGGAATCGAGCCGGAAAAAACGGGCTAACGCCCGTACCTCCCTCAATCAGTCAAACGCTAAAGAAGCTGATTTAGAAAACTTGCCAGAGGAATTGATCCGGAAAAAACGGTTGCGTACTAATATCTTTGTAGATGATCCGGGAAACTCTTCGGACGAACGGAACCGGGAAAACCCGTTACCGAGGGATGTCAGAGATAGCGCCAAGATCCTAACCCGGTCGGATGCAACACAAGGTGACACAAGCACCTCTCTGGACAAGAAACCAAGCTTGAAAAAACCGTTTAGTTTGAAAGAGATTGACAAGTACAGAGATAACGTCAAAACCATCCTGACTTGGTCGAATGCGACGCCCTTCCGATCCCAAGGCGCAGCTTATTTCTGTTTCTTCTGCAGAGAAGAGTATTCCTCACCTAGCGACCTCAAAACTCACACAACTCTAACACACACAGACAAATCTAAAGCTTACAACTTTAAAAATGTCTACGATTTCAGTCTCAAAATTGATATAACTGGTCTGAAATGCCTTATTTGTGAAAAAGGCATAGACACTTTCGAATATCTtttaactcatttaaaaaatcacaaaacgGATATCCATACCGACATCAAGAACCAAATCATGCCATTCAAGTTTGATACAAATCTAATAAAGTGTGTCATATGTAGTAAAGTTTTTGGATCCATCAGTGCGCTACAGAGCCACATGGGCGAACATTATAGTAACTATGAGTGCAATCAGTGCcgcaaaacgtttattaataaagacgTATTGAAAGCTCATAAACGTTCCGGCTCCTGTTCAAAGATGGAAATCCCaatgaacataaataaaaatcggcCAAACGCTACAGAAGCTGATACGGAAAATTTGCCAGAGGATTCGAGAATGAAAGAGCGTGTTAACGCCTGTACCACCCGCAATCGGTCAAAAGCTACAGAAGCTGATACGGAAAACTTGCCAGAGGATTCGATCCGGAAAACACGGTTGCATACTAATATCGAGGTTGACAAATACAGAGATAATGTCAAGAACATTCTGACCTGGTCAAACGCTACCCCTTTTAGGACCCGCGGCACAGAATTTACTTGCTTCTTCTGCGGAGAAGACTTTTCTTCAACCAGCGAACTTAAATTTCACACTATAcagaatcataaaaataaatataaagatttCAACTTCAAATCTGTTTCCAGTTTTAGCCTTAGACTCGACGTGACAAACCTGAAGTGCCTTGTTTGTGAGGAAGACATCGAATCTTTTGAATATCTTTTGATCCACTTAAAAAACCACGGAAAAGACGTCCATACGGATATTAAAAACCAGATCATCCCGTTCAAGTTTGATACAGAGCAATTTGAATGTGCATTGTGCGATAAAGATTTTGAATTCTTTAAACCGCTTTGCGACCATATGAGCGAGCACTTCAGAAACTACGAGTGCGATCAATGCAGTAAAGCCTTTATAAAGAAGAGTTTATTGAATGCACATAAAGAGGGGCACAAAATAGGCAATTTTTACTGCAGGGTCTGTCCAAAGAAGTTCAGCACGAAAGTCAGGCGTGACCAGCATCAAAGAGTTGTCCACATACAATCAAGCCGAGCGCACAAGTGCTGGAAATGTGACATATTCTTCCAGGATGGGATACAGAGAGCAAAGCATTGTGTCGAATTCCACGGAGCTACCCCTCGGAAGTTCAGCTATGATCCGGGAAGCTCGTCCGTCAAGAAACCAAGCCGGACAAAGGACGTTCCCCGGAAATACACGGAAGCCAACAAGAACAGAATTAATGTTACGACCATCCTGACATGGTCCAACGCTACGCCGTTTAAAACGCGCGGGTCAGACTACGCTTGCTGCTTCTGTGAAAAAGATTTCTCTTCGACGAGAGACCTCAAAGCCCACACACTCGCTCACACGGACAAGTGTTGCGCGAAAAAGATCAAAAACCTCTGCGAATACACCGTCAGACTCGACATCACCGATCTGAACTGTGTCATTTGCTATAAAACCATTGATTCTTTAGAAGATCTTATAACTCATTTGAAAAAACACCGAAAAGTATATCACACTGATATCAAAAAGTTTATAATCCCGTACAAGTTTGATACAGACCAATTCAAATGTACCTTATGCGGTGAAGTGTTCAACTACTTTAAACCACTCAGCATGCATATGAGCGTGCATTACAGGAATTACCAGTGCGATGAGTGCAGCAAAACTTTTGTTGGTCACACTTCGTTATTGAGTCATAAAAAGCGGCACATAATTGGTGAATTCAAGTGTAGTGCGTGCCCAAAAACGTTtacaacaaaagaaaaatgcTACAGCCACGAGCGAATGATCCACATATACTCCAGCAAAGCGCACAAATGCTGGAAGTGTGATCTGTATTTCGTTGATGCGGGTAAAAAGGCAGAACATGATGTCGAGTCCCACGGAGCGGAACCTCGGATCTTTGAGTGCAAGATGTGCGAGCGAACGTTTACAACTCGGAGAGCTGAGAAACTCCATTGGAATCATTATCACTTGAATCTCAAGCCTTATAAATGTTCGGAATGTGGCACGGCGTTTGCAAACAAAAATCGCCTAGATAGGCATGAGTTACAGCATACTACATCAAGGAAAAGGCCGCCTAGGATAAGAAGGAAGAAGTAA
- Protein Sequence
- MDEVEDVLDGEVNKIYGRCRCCLDLGYVKNMWTEYLWEGSQEIYGEMLMETFSIAWDSSPNGKEQICSSCVTRLRDAHMFKREVLASEHLLTEGVLDSEPESIKEERLSDLDQYEATTEAVIEDSECKEDEQETVASEEEYLIEEDEEYEEVEYLEEELVSGQVFFFSETKSNADPNTDSEGPSQARTRPKRKRTHGLNTRNYRNYSEDTLRRSIEAALNSDKSISEVAAMYGVPRKTLTARVYNAKHNPKPDDPGNSPDERNREKPLTEDVRDNAMTLTRSDATQGDPSTSLDKEPRPKKQFNLNQIDKYRDNVKTILTWSNATPFRSQGAAYFCFFCRKEYPSPGDLKTHTTLTHTDKSKAYNFKNVYDFSLRIDITEESSRTKRVNARTSLNRSNAKEADTENFPEESSRKKRVNARTSLDRSKATEADTEYFPEELSRKKRVNTRTSLNRSNATEADTEYFPEESSRKKRANARTSLNQSNAKEADLENLPEELIRKKRLRTNIFVDDPGNSSDERNRENPLPRDVRDSAKILTRSDATQGDTSTSLDKKPSLKKPFSLKEIDKYRDNVKTILTWSNATPFRSQGAAYFCFFCREEYSSPSDLKTHTTLTHTDKSKAYNFKNVYDFSLKIDITGLKCLICEKGIDTFEYLLTHLKNHKTDIHTDIKNQIMPFKFDTNLIKCVICSKVFGSISALQSHMGEHYSNYECNQCRKTFINKDVLKAHKRSGSCSKMEIPMNINKNRPNATEADTENLPEDSRMKERVNACTTRNRSKATEADTENLPEDSIRKTRLHTNIEVDKYRDNVKNILTWSNATPFRTRGTEFTCFFCGEDFSSTSELKFHTIQNHKNKYKDFNFKSVSSFSLRLDVTNLKCLVCEEDIESFEYLLIHLKNHGKDVHTDIKNQIIPFKFDTEQFECALCDKDFEFFKPLCDHMSEHFRNYECDQCSKAFIKKSLLNAHKEGHKIGNFYCRVCPKKFSTKVRRDQHQRVVHIQSSRAHKCWKCDIFFQDGIQRAKHCVEFHGATPRKFSYDPGSSSVKKPSRTKDVPRKYTEANKNRINVTTILTWSNATPFKTRGSDYACCFCEKDFSSTRDLKAHTLAHTDKCCAKKIKNLCEYTVRLDITDLNCVICYKTIDSLEDLITHLKKHRKVYHTDIKKFIIPYKFDTDQFKCTLCGEVFNYFKPLSMHMSVHYRNYQCDECSKTFVGHTSLLSHKKRHIIGEFKCSACPKTFTTKEKCYSHERMIHIYSSKAHKCWKCDLYFVDAGKKAEHDVESHGAEPRIFECKMCERTFTTRRAEKLHWNHYHLNLKPYKCSECGTAFANKNRLDRHELQHTTSRKRPPRIRRKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -