Afus031513.1
Basic Information
- Insect
- Anania fuscalis
- Gene Symbol
- zfh1
- Assembly
- GCA_950371115.1
- Location
- OX493352.1:2902789-2913836[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 0.33 32 6.3 5.3 2 21 178 197 177 198 0.93 2 26 0.001 0.1 14.1 3.3 2 23 260 281 259 281 0.96 3 26 0.006 0.58 11.7 1.0 2 22 285 305 284 305 0.96 4 26 0.0023 0.22 13.1 0.5 2 23 349 371 348 371 0.95 5 26 0.0014 0.13 13.8 0.4 2 23 378 398 377 398 0.95 6 26 0.016 1.6 10.4 1.6 1 23 404 426 404 426 0.98 7 26 0.0019 0.18 13.3 0.4 1 23 432 455 432 455 0.97 8 26 0.014 1.3 10.6 0.8 1 23 463 486 463 486 0.91 9 26 0.0013 0.13 13.8 6.0 1 23 496 518 496 518 0.98 10 26 0.0012 0.12 13.9 0.1 2 21 713 732 712 733 0.94 11 26 0.61 59 5.4 1.5 1 23 764 787 764 787 0.96 12 26 0.00016 0.016 16.7 0.3 1 23 792 814 792 814 0.97 13 26 0.17 17 7.1 8.7 1 21 817 837 817 838 0.95 14 26 0.00014 0.013 16.9 0.6 1 23 854 877 854 877 0.95 15 26 4.8e-05 0.0046 18.3 2.0 1 23 883 905 883 905 0.98 16 26 0.062 5.9 8.6 0.3 1 23 939 962 939 962 0.93 17 26 0.00081 0.079 14.5 3.7 2 19 1090 1107 1089 1110 0.92 18 26 4.6 4.5e+02 2.7 0.0 3 23 1117 1138 1116 1138 0.95 19 26 0.033 3.2 9.4 0.4 2 23 1144 1166 1143 1166 0.96 20 26 3.6e-05 0.0035 18.7 0.6 2 23 1172 1193 1171 1193 0.96 21 26 1.1 1.1e+02 4.6 2.2 2 21 1197 1216 1197 1217 0.91 22 26 0.00045 0.043 15.3 0.3 1 23 1243 1266 1243 1266 0.95 23 26 0.006 0.58 11.8 0.8 1 23 1272 1294 1272 1294 0.95 24 26 0.44 43 5.9 0.1 1 23 1300 1322 1300 1322 0.96 25 26 0.016 1.5 10.4 1.1 1 23 1328 1351 1328 1351 0.93 26 26 0.0012 0.12 13.9 1.1 2 23 1358 1380 1357 1380 0.96
Sequence Information
- Coding Sequence
- ATGAGCAGAGAGATAGACGTAAAGGCGTTGGTTTCGCATTTGGTGCGTGGAGATGGGGCCGACAAATGCCGAATATGTATGGGCGAGACGTCAGAAGGGCAAGTTTTTCTGGGAGACACCGTGATGATGGACGGAGACAGGCCGGTCACGCTTGCAGACCTCCTGGAGTTGGTTACAGGTGTCGAGGTACTGGAGGATGCATACCTGCCTCAAGGCCTTTGTTCGATATGCACTGGATCAGCAGTAGATGCTGCTAACTTCTCAACACTCTGCAAGAAAGCGGAAGACCAGTGGGATACAATGTTGCAGCTCTTAGGCAACCTCCCATCGTTGGACAAAGTGCCTGAGAAATGCACAAAACTGTATGCTTTCATAGAAGGTGATCAAATGATGATTCAAACAAACGAGGAAGATATCAAAACTGAGGAAGATTTGGAATACTCACTGCTCAAGGAGATATCTAATAGTGTTACCCGACAATCACTGTCAGATGTAAAAAAAGctcataaaaagttcaaaacttTACAATGCCAATGTCCCATGTGCAAAAAAGAATTCCGCTGTGCGGAGCACTTATCTCAACACTTGAAATATTCTTCAGACTACAAGAGAGCATGTCACATTTGTGCTAAGATAATGCTGAGGAATGATTTAGTGCAACATTTAGGGGAAGTGCACAAGACAGAACTGTTTGATTGTAAACAATGTCCGGCCCTATTTTTatcaaagataaaatatttaaaacacattGGTTCAGATCATGTTAAAGGCGTTTGCACTTGTGGTGACTGCGGTCGTAGTTTTCAATCGAATCAAGCTTACCACGCTCACCAAAATATGCACATCCCTAAGACATGCCCGGGCTGTGACACAGTTTACCGTAACCAGCCTTGCTATATTCACCATGTGAGAACATGCTGTAACCTGGACAAGAATCGTAAAGATACACATAAGACTAAAAACAAAGTAACTATCgaagtaaaaaataagttaagtaaaagGAATGTTAGAGTTGGTCTTCGAGGCAGTGCTCAAAATGAGTGTGTATGCGATTATTGTAACAAAACTTTTGCGGGTAAAAAATTTGTTGCTGCTCACATACAAATTGTCCATCTAAAAAATACACATCTACCTTGTCCATACTGTGGAAAGGAGTTTGCATCTGCTCATATGACAACCCACATAAAAAGCCATGAGAAATCTCCATTATTCAAATGTCAATATTGCAACCTTGTCCTAAAAACGAGGTTGGGTTTCAGTCAACACTTACGGCTACACACAGGAGAAAAGCCATATCCTTGCAAGCAATGTGGAGAGACTTTCTCTGCATCGTCCAGAAGATCAGAGCATATACGCAAAGTACACAATGTTGATAATTTATACAAGCATGCATGCAGTAAATGTCCTGCTCGTTTTTCTTTTCCATTTCGTTTAAAGAAACATATTGCTGATGTACATAGTGAAGAAGGTTTGGACAGCAATTTGTTCGAATGTCCGGAGTGTCATGAAAAATTCCGCACATGTAGAGGGCTGATACATCACGGCAGAAAGCATCAGCAAGGAGTCGTCCAACAGCCTAAGAAGAGAATTGCTCCTTTGAAGGTTGACCTGGCCCCGAACCTGCCCGCGATGGTCTGCTCCGGATGTGTTACCTGCGCCATGCAGGCCGCGCCATTCATCCAGCTTTGCTGCGCGTCCCGACAAAAATGGCATCAGATATCCGACTACCTCAACGACTTCGAAGTCGGCAAGAGAGACAGCGTTTGCATTTTAATCGGAGACGAAATCAGATTGGTGGTGGAGGACAAGGATTTGCCGGGTGGAGTGTGCCGAGATTGCTCCGAAAGCGGGATTGCCGCGTTCGCCTTCCGCCAAGCCTTCAGGGAGTCCCACAACCAATGGTCACAAGCCGCAGACTTCCTATCCACAATTCAGGATCCTTTTGAAAAAGATAAAGTCTACTACATATTCTACAATGCAAACGCGAGAACTATTGTTGGGGATCAAACGGAAAACGCTCAGAGTATGGAGAAAGCGCTGAATCGACTGAACTCCCAGTTTCAGGATCCAATCGAAGAAGATAAACAACCTAAACCAGTAACGAAAATCTTTAAAAGAATGCCCCATGGCAAGTTAAGTTGCCCTGATTGTGGAAAGAAATTCGGAGTGGCAACGTTTTTAAACTCTCATCTGAGAAACACTTTGAAAAGAGCTTGCAATTTATGCGGATTGGTCGTGCCAAAGACAAAACTAGCCGAGCATTTGAACGGCGGGCACGGAATGAGCGTCTATTCTTGTTGTATATGctacaatttatttgaaaacCCACTAGACTTAAAAACCCATCTGACAGTCTATCACAGTGATTCGAAATTTCAGTGTAAAGTGTGCGGCCTTAGTTTTATCAACGAGCGAGCTCTAAGCGCTCACACGTATTCACATTCGTTATTCCATTGCAATTCGTGCGGGAAATGCTACGATAACCGAAAATGTCTAATGCATCATCAGAAACTCTGTAAATCCCCAAAAGTACGGTCGAGTATGATTCACGGGAACCGATATGTTTGCGACCATTGTGGCGCATCTTATACAAAAAAACCTTCGCTACGGATCCACATCATACAGAAACATCTGAATGTCTTACCATATGTTTGCGAGACATGTGGTAAGCGTACGTCGACGATCTCACATTTAAGATCCCATGAACAAACGCATAAATTACAAAGGAGACTGTTTCAATGCCATTGCGGCGCAAAAATGCGTACTGAATTAGGTTTCCATCTCCATCAAAGAATACATTCTGGCGAAAAGCCGTATGAGTGCGAAGATTGCGGCGAAAGGTTTCTATCGGCTTCTAGAAGGCTGGATCATATAAAACGAAGGCACAGGAGCGCTAAAGATATGCCTCACGGATGCGAAGAATGCACAGCTAGATTTATGGAAGAAGAGCCCTTTGTGCCTCTCGGCATTTGCGCAACTTGCGCTTCAACCGCCCTCGCCGTGCAAGAGTTCCGCATGTTGACACAAAATTCACAAAAGCTCTGGTATAAAGCTGTTGACGCGCTCAGTGTGATCCCACAATCGTCCGCACCTTCCGTCAAATCTTTATGCGCCTTCGTTAAGCCCGATACCCTATCTGTACACACGGTAAAAGACTACGCCGGTGGTGACACGAAGACTATATTAAACCGTCTAAAAAACAGACTGACAAAGAGAAAATCTAATCTGAATAAGAAACCTCGAGCACCAAGGTCTGGTCCGGCTTGTACATGCCCGGATTGCGGGAAGTCCTTCTACAGTCCTTACTACTTATGCTTACACTTCAGCAACAGCGGGCAGAAGGAAGCCTGCGCCACCTGCGGTGCTGTTGTGATCAGAGGACAAGAAATGAAACAGCACCTCTCAAGAGTTCATGGAGAAAACGTCATCTCCTGCAAGCAATGTCCTCTACTCTTCACGAACGAATTACGCTTAGAGAAACATATAAAGAAGGCGCATAAATTGGGATCCCTAACCTGTTCAGATTGCGGACGCACATTCCCTAGAAAAGCGTCGTTTGAGTCCCATTCCCAAATGCACGCGGTCAGGACGTGTCGGGCTTGTGGGACGCAGTTCACAAATCGCGGCTGTTACAGAGAACACAGGTCGAAATGCGAGCCTGACGCAAGGCCCGACACTCAGTCGCTGCCTCGAAACAAACGCTCGAATATTCGGGACCCAGCCACGTTTACATGCGATTACTGCGGGAAGACGTATCTATCGCGCCCGCAGTTGAAGAACCATATAATTTGGATCCACATGGATGTCCGGCCACATCAGTGCCAGTGGTGTTCGAAGCGGTTTTACACGCCCGCGCGTTTGGCGGAACATACAGTAGTGCATACCAGGGTTAGGAACTTCGAATGTGACATTTGCGGTGCGAAATTAGTGTCCAGGATGGCAGCAGTGTATCATAAGCGGAGGCATACGGGCGAGAAGCCTTACCATTGCGAGGAGTGTGGCGAGAGTTTCATATCCGCGTCTCGTAGGTCGGAGCACGCGAAGCGGAGGCATGGGAAGGGGCCGTTCGTGAAATGTATGCACTGTTCAGCGACGTTCGTGCGAGGGTACGAGCTTAGAAAACACATGGAGAAGGCGCACAGGCCTAAGATTGATCCGAGTATACATATTATAGATGTGCCATTGGTAGCGGATGTGACCGCTCCGGCTGGTGTTACAACAAAGAGCCTCGTTGTGTAG
- Protein Sequence
- MSREIDVKALVSHLVRGDGADKCRICMGETSEGQVFLGDTVMMDGDRPVTLADLLELVTGVEVLEDAYLPQGLCSICTGSAVDAANFSTLCKKAEDQWDTMLQLLGNLPSLDKVPEKCTKLYAFIEGDQMMIQTNEEDIKTEEDLEYSLLKEISNSVTRQSLSDVKKAHKKFKTLQCQCPMCKKEFRCAEHLSQHLKYSSDYKRACHICAKIMLRNDLVQHLGEVHKTELFDCKQCPALFLSKIKYLKHIGSDHVKGVCTCGDCGRSFQSNQAYHAHQNMHIPKTCPGCDTVYRNQPCYIHHVRTCCNLDKNRKDTHKTKNKVTIEVKNKLSKRNVRVGLRGSAQNECVCDYCNKTFAGKKFVAAHIQIVHLKNTHLPCPYCGKEFASAHMTTHIKSHEKSPLFKCQYCNLVLKTRLGFSQHLRLHTGEKPYPCKQCGETFSASSRRSEHIRKVHNVDNLYKHACSKCPARFSFPFRLKKHIADVHSEEGLDSNLFECPECHEKFRTCRGLIHHGRKHQQGVVQQPKKRIAPLKVDLAPNLPAMVCSGCVTCAMQAAPFIQLCCASRQKWHQISDYLNDFEVGKRDSVCILIGDEIRLVVEDKDLPGGVCRDCSESGIAAFAFRQAFRESHNQWSQAADFLSTIQDPFEKDKVYYIFYNANARTIVGDQTENAQSMEKALNRLNSQFQDPIEEDKQPKPVTKIFKRMPHGKLSCPDCGKKFGVATFLNSHLRNTLKRACNLCGLVVPKTKLAEHLNGGHGMSVYSCCICYNLFENPLDLKTHLTVYHSDSKFQCKVCGLSFINERALSAHTYSHSLFHCNSCGKCYDNRKCLMHHQKLCKSPKVRSSMIHGNRYVCDHCGASYTKKPSLRIHIIQKHLNVLPYVCETCGKRTSTISHLRSHEQTHKLQRRLFQCHCGAKMRTELGFHLHQRIHSGEKPYECEDCGERFLSASRRLDHIKRRHRSAKDMPHGCEECTARFMEEEPFVPLGICATCASTALAVQEFRMLTQNSQKLWYKAVDALSVIPQSSAPSVKSLCAFVKPDTLSVHTVKDYAGGDTKTILNRLKNRLTKRKSNLNKKPRAPRSGPACTCPDCGKSFYSPYYLCLHFSNSGQKEACATCGAVVIRGQEMKQHLSRVHGENVISCKQCPLLFTNELRLEKHIKKAHKLGSLTCSDCGRTFPRKASFESHSQMHAVRTCRACGTQFTNRGCYREHRSKCEPDARPDTQSLPRNKRSNIRDPATFTCDYCGKTYLSRPQLKNHIIWIHMDVRPHQCQWCSKRFYTPARLAEHTVVHTRVRNFECDICGAKLVSRMAAVYHKRRHTGEKPYHCEECGESFISASRRSEHAKRRHGKGPFVKCMHCSATFVRGYELRKHMEKAHRPKIDPSIHIIDVPLVADVTAPAGVTTKSLVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -