Basic Information

Gene Symbol
CSRNP3_1
Assembly
GCA_950371115.1
Location
OX493325.1:19491665-19493926[+]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.19 7.2e+03 -2.3 6.1 69 109 15 55 2 107 0.54
2 4 0.71 2.7e+04 -4.2 0.1 86 110 165 189 155 199 0.56
3 4 2.6e-101 9.6e-97 324.2 8.3 1 218 220 429 220 429 0.92
4 4 0.15 5.8e+03 -2.0 1.1 42 90 631 676 618 702 0.43

Sequence Information

Coding Sequence
atGGAGAGCTCTACACCGGAGCAGAATAGTCTGCTTGAAAATGAAGAAtcaaaaagcaataaaatggCTGTAAAATCAGAAGATGACAGAGAAAAAGAATCATTTTCCGTGATCAAAGTTGAAAAAAGCAGTGATAGTGACGCTAATAGTGAAGATTTAAGCTCCAATGAAgaacaaaataatttgaatagtAATAGCAGCTCTCAGTTTTATGAGAGCAGTGATAGTAAAATAGATTTTGCTGTAAAGATAGATGATAGTGACACTTTAAGTGATATAGAAGATATTAAAACGGACTCTGCGTCAGCGGATAGTGAAGATTCAGCACTTGGGAGTTTGCCGCCAGACAGTGTACTGAATGAACGCGAAGAAGAAGTTCAAGATCGTTCCGATGGCAGTGATTCAGGTCTCGGGTCAGAAACAAATGAAGATGCAAAGTTGCCTACTTTCAACCTTTCGTTGCCATGCACCAGTGGCCTGaatgatttaaaatcaaaaagcaCAGAACCAGCTGAAAGCTCAGGGGTAGAAAACGAAGGAAATGATAATGCCGATGATAATGACTATAATCTTAATctaatacaaaaaattaaaccctTTAAAAGTAGTCTTAAAAGAAAGCACGAGGGCGATGAAAGTGTTGCACCACACCCTAAgaagagaaaagaaaatattaaattcaataacGTCACAGTTTACCATTTTCCAAGGGCACAAGGTTTTACGTGTGTTCCGTCGCAAGGCGGCTCTACGTTAGGAATGGAATGGGAACATACACACATTCAAAATTTTACTCTAGCGGAACATGCGTTAGAGCAGAGAAGATTACACAGGCAAATCTTACAACAGTTAAAAAGTGAACGCTATTCTATACAAGGCGTATCGCTATCATCCAGTGAAGATAGTGACACGGAGGAAGAAGCAAGTGATATATCAGAATCAGAGTTGGATTTAGACAGTTACTATTTTCTGCAACCTATACCAACAAGGCAGAGACGAGCCTTGTTGAGAGCTGCTGGAGTAAGGAAAATTGAAGGTTATGAAAAGGATGAATGTAGAGATATAAGGACTTCACGTGAATTTTGTGGGTGTTCCTGTAAAGGAACATGTAATCCAGATAGTTGTTCCTGTAGTCTTGCTGGCATAAAGTGTCAAGTTGATAGACTTAACTTCCCGTGTGGATGTACTCGTGATGGGTGTTGCAATACTACTGGGAGAATTGAATTCAACCCTGTACGAGTGCGAACACACTTTATACATACGCTTATGAGAATAGGTCTGGAAAAGAAAAATGAAGAAAATCATGAAGCTGCTAAAAGACAATGGGCTGAGGCGCACAGCGCTTCTACTTCAATGTGTGTTGTAAATACACTATATGAAAGAAATAACAGCCAAAATCATGAAGATGGTTTACTACGCGATGTAAGTCTAAGTCCGAGAGTTGAAGTCGAGTCATGTGTGAATGCTGGgaactttaataatattcattgtAATATGAATAACACAAGTGGCCACAGTAGTATGCACAAGGATTTGCCTTACGGGTACAGAAACGATACAACGAACCCGAGAAATATAAATGAAAGTAGTGTGCACTTTGAAAACGCCAATAATCATCATAATCAACTGCCTCCTTATCCTTCTAACATTTTTCAAGGCAAAGGGCCGCCTTATTCTGTATCTAACGCTATGGGATATGACTCCATGGCTAATAATATTCAAAGATTTCCGTGTGATCTCAACTATACGTATGAACAGCATTCAGATAACCACCACTTTAAAGGGCTTCAAAGTTACTCAGCCACAAGTTTCGAAGAAtttgcccataattcacaaattaatatgtttAGCCACTACGGCCACATGTACGTGCCAGATACATACATGCACAAGTCTAACACCAATATGAATGAGCACAACTCAATACAGTATCACAATCATAATATTCCGCAGAACCAGTACGACGCGTACAAAAATACATCGGAGTGTGTCAACACTGAAAACAAAACTGACACGCATTATACAACTCTGATGACGATGCCATATCAGAATAGCAATAAGTTGCAGAGCGTGGAGAATGACGAAAACTGGTTCAGCCACAGCGCTTTGTTGGGCCTCGAGCACGCAGACCACGCCACGCAGGACGCCGTGGATGCGCCCCCCCAGCCCGCTGACCCGCAGTCCGAAACTAATACTTCTGAGACCACTGAAAACTTCGGAGAACTAATTAAGAAAACTATGGTAGAGTCTGTTACTGTGTAG
Protein Sequence
MESSTPEQNSLLENEESKSNKMAVKSEDDREKESFSVIKVEKSSDSDANSEDLSSNEEQNNLNSNSSSQFYESSDSKIDFAVKIDDSDTLSDIEDIKTDSASADSEDSALGSLPPDSVLNEREEEVQDRSDGSDSGLGSETNEDAKLPTFNLSLPCTSGLNDLKSKSTEPAESSGVENEGNDNADDNDYNLNLIQKIKPFKSSLKRKHEGDESVAPHPKKRKENIKFNNVTVYHFPRAQGFTCVPSQGGSTLGMEWEHTHIQNFTLAEHALEQRRLHRQILQQLKSERYSIQGVSLSSSEDSDTEEEASDISESELDLDSYYFLQPIPTRQRRALLRAAGVRKIEGYEKDECRDIRTSREFCGCSCKGTCNPDSCSCSLAGIKCQVDRLNFPCGCTRDGCCNTTGRIEFNPVRVRTHFIHTLMRIGLEKKNEENHEAAKRQWAEAHSASTSMCVVNTLYERNNSQNHEDGLLRDVSLSPRVEVESCVNAGNFNNIHCNMNNTSGHSSMHKDLPYGYRNDTTNPRNINESSVHFENANNHHNQLPPYPSNIFQGKGPPYSVSNAMGYDSMANNIQRFPCDLNYTYEQHSDNHHFKGLQSYSATSFEEFAHNSQINMFSHYGHMYVPDTYMHKSNTNMNEHNSIQYHNHNIPQNQYDAYKNTSECVNTENKTDTHYTTLMTMPYQNSNKLQSVENDENWFSHSALLGLEHADHATQDAVDAPPQPADPQSETNTSETTENFGELIKKTMVESVTV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01280303;
90% Identity
iTF_00076544;
80% Identity
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