Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_950371115.1
Location
OX493348.1:6677700-6679988[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.11 1.7e+02 3.4 0.0 22 33 226 237 222 241 0.88
2 5 1.7e-07 0.00028 22.0 0.1 4 45 260 303 257 304 0.92
3 5 1.2e-10 2e-07 32.0 0.4 3 46 312 359 310 359 0.94
4 5 2.5e-07 0.00042 21.4 0.0 1 43 363 405 363 408 0.96
5 5 0.0002 0.33 12.1 0.0 3 45 415 459 413 460 0.94

Sequence Information

Coding Sequence
ATGGACATCGACAGCGACGAAGACACAGAAACTCAAATTAAAGATCTAGAGCAGCTAACAGCTGTATTAGAAGATGAATCTGTTGCCTCCTGTTCCGGCTCAAGATGTTCTGCTCCCGCTTCTGCCGTTAGTTTGCTCAGCTCGGGCTCCAAAGTCGAAGAATATTCGAGAATAGAGACCGCGTTAGCTCTGAACAAGCTTACGGACATGAAGCTTCAACGACTCGAAAAAATACTTGCCAATCGTCTTCGCCAGTGCAAAGACAAACTAACAGAAATTCAAGCTACGTATGCTAATGCTGACAAATCTACGAGAGCCGAAAAGTTCAGATACATTAACTGCGGTAAGCCATACTTCAAGGACTCTAGCAATTTCCCTGCTCCGGATAATAGTGATtcaatattaatgaaaaaatcgGGTATGTATGACTTTTCGTGTGTCGCCTCCATACCTGGGTGGACTGTTAAAGACAAAAGTGAATTCATCTCATCTGTTCTCAAAATTTCGAAAGATCTCAAAGTCAAAGAACTTAATTCTAAATTAGCAGAAATCCGTCGAGACACTAAAATACCCCAATCTAAAAAGGACACACTAATTGATGCCATCAAAGCAGAAATACCAACAGTAAGTAAAAAGTCTCTGAAAGAGGTAGCATTGCCGATAGAAGAAGAATATGATTGGGACGCTATTgccaacaaattaaataatcgACACGGCCCTCAAGAATATGCTTCTCTGTGGAAGTTGTTCTTGCATCCGAGTATTAATAAAGAATTTTGGAGCAAAAATGAACACTTAGCCTTGCAGAGACTAGCCCATGGTCACAGCTTAATAGACTGGGACAAAGTAGCAGAATTATTGAATACTAAACGTACCGGTTAtcagtgttttgtttattttcgaaCAAATATGAGTAACACCCTGTCAGGGACAAAATGGACCAAAGAGGAAGAAGAGTATCTGAAAAGGCTCATAGAATATTATAGGGAAGACAACTACATTCCTTGGGCAAGAATTGCTGCATCTATGGAAAACCGAACAAAAATTcagatttataataaataccttaggATGCTAGAGCTTAGAAAAGGCCGGTTTTTGGAGGAAGAAGATGCTGTTATCCTTACTTGTGCGGAAAAGTTTGGGCTCAACTTAAAGAAAATGAAAGAATTTCTGCCGGGTCGTTCACAAGCTCAGCTAAGATATCGCTATAAAgtgttacagaaacaacgaATATCTTCAGTGTGGACGGTATCAGAAGATAAAAAACTAGTACAACTTATGGCTAATCAGGATTCAACAACCAATTTTGCAAATTTAACAAAGTTTTTCGTAGGTAAAGACCGTGGCAGTCTTAGAGCAAGGTACCTAACATTAATGAAATGGATAAAACGAAATCCTAATATAGACCTAGTGTGCGCTCCACGGCGTGCCGCGCGGCGCTTATGTCATGGTCAAGCTACAACTAACTTGAACATAGCTATTGataaacttaaaaagaaaatgcAATCAGAATTAGAAACGAAAAAACCGAAAAGAATAACAAAGGAGTCTACAGAAGATGAAATTGATGATGCTATCATTGCTGCTCTTGTCACCATTCAAGTCAAAGAAAGTGAAGCAGATGAAGATCATGCATCAGATCTAGTCTTAGATAAAGACACTATAATCTCTAATGTTGATCTGAATGCAAGAAATTTACAAAAGGCCCTTGTTTTATTAAAGGCAGCTTTAAACAAAGAGGAGTTCAAAAGTAGTAAATACAGTGAAACATATCCGGAACTTTTGGTTCCTGAGCAGGAAGTATGTTTAGTGAAAGTGAAGTCATATTCAAGGAAAAATATATCAAACACAATCAAAGTTAGTTCACCACCTAATGTATGGGGTGAAAATGTATTGAAGTGTACGGAGTATGTATTCCCACCGCATTATGCTACTATTACCGGATGCAGAGCTTTGTTATCACATATAACTGCAAAAGAATTACCAAAAGTAGATTTGAACCTTTTGAAATCTAGAAATATTTTGTTCCGTGAGCAAATGTTCCTCTTGATGGatcgttttaatattttgtttgtgtgGCCTATGTTGCTATCAAATGAAGAACCAGAAACAAAGTCTAGCCGATATTGGAAGCAAAACTCGAAAAATGGAGAAGTCCCACCTCCACTAGCACCATTACCTTCCACATCAATTTTTGAACCACAAGAAACCAAACCTTCAGATGAGGAAAATACCCCGTGTGGTAAGAAGAAAACACGAAATAacaagaaaaaagaaaagaagtaA
Protein Sequence
MDIDSDEDTETQIKDLEQLTAVLEDESVASCSGSRCSAPASAVSLLSSGSKVEEYSRIETALALNKLTDMKLQRLEKILANRLRQCKDKLTEIQATYANADKSTRAEKFRYINCGKPYFKDSSNFPAPDNSDSILMKKSGMYDFSCVASIPGWTVKDKSEFISSVLKISKDLKVKELNSKLAEIRRDTKIPQSKKDTLIDAIKAEIPTVSKKSLKEVALPIEEEYDWDAIANKLNNRHGPQEYASLWKLFLHPSINKEFWSKNEHLALQRLAHGHSLIDWDKVAELLNTKRTGYQCFVYFRTNMSNTLSGTKWTKEEEEYLKRLIEYYREDNYIPWARIAASMENRTKIQIYNKYLRMLELRKGRFLEEEDAVILTCAEKFGLNLKKMKEFLPGRSQAQLRYRYKVLQKQRISSVWTVSEDKKLVQLMANQDSTTNFANLTKFFVGKDRGSLRARYLTLMKWIKRNPNIDLVCAPRRAARRLCHGQATTNLNIAIDKLKKKMQSELETKKPKRITKESTEDEIDDAIIAALVTIQVKESEADEDHASDLVLDKDTIISNVDLNARNLQKALVLLKAALNKEEFKSSKYSETYPELLVPEQEVCLVKVKSYSRKNISNTIKVSSPPNVWGENVLKCTEYVFPPHYATITGCRALLSHITAKELPKVDLNLLKSRNILFREQMFLLMDRFNILFVWPMLLSNEEPETKSSRYWKQNSKNGEVPPPLAPLPSTSIFEPQETKPSDEENTPCGKKKTRNNKKKEKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00076482;
90% Identity
iTF_00076482;
80% Identity
-