Afus028697.1
Basic Information
- Insect
- Anania fuscalis
- Gene Symbol
- -
- Assembly
- GCA_950371115.1
- Location
- OX493347.1:8085909-8086301[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.5e-09 2.9e-06 27.9 0.0 1 32 25 56 25 65 0.94
Sequence Information
- Coding Sequence
- ATGGTGCGAACATATCAAAGAAAGTACACTAACACACGCAATGGCAAATCTCATCCCCCATATGCAACTTATTCTGAAGAAAATTTGCAAAAAGCCATTGAAGCTGTACAAAACCGTTCAATGAAATTAAAAGAGGCTGCCGAAAACTACAATATTCCGATGAGCACTTCAAgcacaaaatatagaaatttGAACTGCACTCAAGAAAAAGCGGGACACCCAACGCTATTTTCAAAAGAAGAAGAGGAGGCGTTCGTAGAAAATATAGTATTACTGAGCCAGTGGGGATTTCCTTTAGATTCAATGGACCTAAGAGTGTTTGcacaaaaatacttaaacagAATTGGCAAAACCATATATAACCTAAAAGATAACATGCCTGGCGTAGATTAG
- Protein Sequence
- MVRTYQRKYTNTRNGKSHPPYATYSEENLQKAIEAVQNRSMKLKEAAENYNIPMSTSSTKYRNLNCTQEKAGHPTLFSKEEEEAFVENIVLLSQWGFPLDSMDLRVFAQKYLNRIGKTIYNLKDNMPGVD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00150413; iTF_00075410;
- 90% Identity
- iTF_00075410;
- 80% Identity
- -