Afus003282.1
Basic Information
- Insect
- Anania fuscalis
- Gene Symbol
- -
- Assembly
- GCA_950371115.1
- Location
- OX493325.1:17193005-17196762[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-08 7.3e-06 26.6 0.1 1 38 8 44 8 48 0.89 2 2 2.8e-06 0.0015 19.2 0.0 21 45 74 98 72 98 0.92
Sequence Information
- Coding Sequence
- ATGGCGCCGAAGAAAAATTACACTCCAGCCCAAATGGGCAGTGCTATAGAGGCGGTTAGAAATGGTGCTAAAATTGCAGAGGCTGCTCAAAGGTATGGCGTCCCCCGGATTACGCTGTATAACAAAGTTAGTGGCAAAAGTCCAATTGACTGTGCCATGGGACCCAAATTAATTCTTTCGAAGTATGAAGAGGATATATTAATAAAGTGGCTAATAGGAGAAGCTGCTCGACATTTTGGCGTGCCACATAGCACTTTAATAAGCAAACTTAAAGGGAGGGTTCCACTACAAAGAAAAATGGGACGCTCCACATATTTCACTACAAACGAAGAAAATCTACTAGTAAGATATATAATTTCTAATGCAAAAAAAGGTATACCCATAAACAGACGAACATTACTGGAAACCGTCAAAAAAATTTTAGATGATGATAAGAGACTAACGCCATTCAAAAACAATACGCCCGGCAAGAAGTGGGTTGCCTTATTCTATGATCGCCATCCGGAAATCAGTGAAAAGAAAGCAGAAGGGATATCTACATCACGTGCACTAGTCTCTACCGAGGACTTAAAACAGTGGCATCAGTCACTCAAAGAGCATTTGATCGAGGAAAATGCTCTGGACATCATTGAAGACCCGAAACGCATTTTTAATGCTGACGAATCAGGATTCCAGACTTGCCCAGAGTCAGGCAAGGTAATAGGGCCAGCCAATATGAAAAATTTCTATGAAATTAAGTCTGGGAAAGAAAAAGAACAACTGACAGTCATGCTGACTATAAATGCTGCTGGTCAAATAGTCTCCCCGATGATTGTATACCCACTGGTTCGAATTTCGAGAGAAATTGCAGTAAATGTTCCGGAAAGTTGGAGCATAGGCAAGTCTCCGTCAGGTTGGATGAACGGACCATTGTATTACGAGTACATCGTAAATGTCTTTGACCCGTGGCTAAGGGCAAACGATATACAAAAGCCTGTTCTGCTTTTAGTAGATGGCCATCGCTCCCACCTGACGTTGCAAGTGTCTCAGTATTGCGCGGAAAATCAAATAATTGCTTTCGCTCTTTTCCCGAACTCGACGCATATTTCCCAGCCAGCTGATGTATCTGTCTTCAAATGCTTGAAAAGTGGCTGGAAAACCACAGTAAGCGAGTACAAACAAAATAGCGGGAACAGGCAGATTACCCGTGCTGGTTTCGCACCATTGCTCGCTAAAGTCTTTCAAGAAAAGGTGACTTCAGAGATTGTCGCCAATGGATTCAAAAGATGTGGACTGTATCCATTCGACGTTAACGGAATGGATTTTGCAAGGTGTATGGACCATGACTCTCGTAAAACTGCGCCTGTTTCAGCTCCTTTATCCACAAACTGCGTGGCCCCCACTCCCATAGTGGGAGTAGAAACACTTCTGCTTTTTGAATCATTTATGAGACGAGGCCGCGTACTAGAATTTAGACGTAGCAATGAACAGTGGGAAGGAGAGGAGAGTGCAAGGGAATTATTTTATACCTGGAAAAAGTTTCGTCAGTGCTGCCTGTTTGATTCTCCCGCTTCTAGTGCAGGAAATGGTAACGATTTCACAGATACCTTCAAATCTCAGCGTGCAATGACACAGTCTCCTTTGTTGCTACGAGAACATTCAACTGGTGACATGCAGTCCTCAACACCATCCAAAATACCATCGCAAAAGCAGCACACTGGAGATACGCCGGATAAACCTGTGACCACTAGACTTCTATCTTCAGAGACGCCGAATCTTGTAAATAAGGCTCAAGACATTCTTACCAGATGTAACACTCCAGTTCAAGAAGTGCCAGTTTGTAGTACCCCAGTTTCTAATGCACCAAATCTTCTAGAGGTATCAAAATCACTTAAGGGAATAACAACTTCGATCGTGAAGGGACCAGATCTTCTTGAGAAATTAAAAACTCCCACTGATACCCCCGTCTCGCAGATCATGGTCCAGATACCTGATCTTCCAAAAGGATCTGAAACTCCAACCGCAAGTACGTCTCCGGTCTCGAAGGCGCCAGATTTGCCGAAGGGAACTGAAACTAAAACTCCAGAAAAAAGCTTGAAGGCTCGTACCACAAATATCCAAACAGGAAAGCCGCCTGGCCCTACGTCACCTAGAACTACGTTACCTGGCCCGTCATGTGACTTTAAAGGATTCTCCAGTTCACCGAAGAATGTTACTTTAATTATTCAGAAACAAAAACAAGTAAGTCCTGCTTTTGGAAACCATTTAATATGGCCATCAGATTCTCCAGTGAAGAAAACAAGAAAAGAACGTTTACCATTTGCTACTTCATCCAAGAAATGGCAAGACTACTGGATTATGAAggatgatgaaaaaaaacagaaaaatatacaAGCTGAAACCAGGAAACGCATTCGTGAAGAAAAGAAAGCCCAGAAAACTGCAAaagcaaagaaaaacaaaatgaaaagagTAGAAAGAAGCGACAGCAGTGAATCAGACGAAGAAATGATAGACCAAGAAATTACGGTTAGTGATGGTGAAACAGATATAGAAAACCAAGCCGAGGAAGAATCTGATGAAGAAACATTTCATCAAGCTCAGGGCAATAACTGTCGTTCAAGTATGGTTTTGGCAGGATTCAAGAAGGGGGATttcgttatatttatttacgaagGTACATACTTTGTTGGCCAAATTGTATCGACATGTGAAGAAGGCTTACTGATCAAGTCAATGTATAAGTCACTGAATAATTGGAGATGGCCGGACAAAGAAGATCTCAATTTGTATCGAATCGAAGATATAAAAGAAAAGATTCAGGAGCCTCGAAAAATAAACCAGAAACGGGGTATTTACAGCGTTCCAGAATTTGAAAAGTACAGAGactttatttaa
- Protein Sequence
- MAPKKNYTPAQMGSAIEAVRNGAKIAEAAQRYGVPRITLYNKVSGKSPIDCAMGPKLILSKYEEDILIKWLIGEAARHFGVPHSTLISKLKGRVPLQRKMGRSTYFTTNEENLLVRYIISNAKKGIPINRRTLLETVKKILDDDKRLTPFKNNTPGKKWVALFYDRHPEISEKKAEGISTSRALVSTEDLKQWHQSLKEHLIEENALDIIEDPKRIFNADESGFQTCPESGKVIGPANMKNFYEIKSGKEKEQLTVMLTINAAGQIVSPMIVYPLVRISREIAVNVPESWSIGKSPSGWMNGPLYYEYIVNVFDPWLRANDIQKPVLLLVDGHRSHLTLQVSQYCAENQIIAFALFPNSTHISQPADVSVFKCLKSGWKTTVSEYKQNSGNRQITRAGFAPLLAKVFQEKVTSEIVANGFKRCGLYPFDVNGMDFARCMDHDSRKTAPVSAPLSTNCVAPTPIVGVETLLLFESFMRRGRVLEFRRSNEQWEGEESARELFYTWKKFRQCCLFDSPASSAGNGNDFTDTFKSQRAMTQSPLLLREHSTGDMQSSTPSKIPSQKQHTGDTPDKPVTTRLLSSETPNLVNKAQDILTRCNTPVQEVPVCSTPVSNAPNLLEVSKSLKGITTSIVKGPDLLEKLKTPTDTPVSQIMVQIPDLPKGSETPTASTSPVSKAPDLPKGTETKTPEKSLKARTTNIQTGKPPGPTSPRTTLPGPSCDFKGFSSSPKNVTLIIQKQKQVSPAFGNHLIWPSDSPVKKTRKERLPFATSSKKWQDYWIMKDDEKKQKNIQAETRKRIREEKKAQKTAKAKKNKMKRVERSDSSESDEEMIDQEITVSDGETDIENQAEEESDEETFHQAQGNNCRSSMVLAGFKKGDFVIFIYEGTYFVGQIVSTCEEGLLIKSMYKSLNNWRWPDKEDLNLYRIEDIKEKIQEPRKINQKRGIYSVPEFEKYRDFI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00040741;
- 90% Identity
- -
- 80% Identity
- -