Basic Information

Gene Symbol
ARID5B
Assembly
GCA_950371115.1
Location
OX493352.1:3423587-3465028[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.2e-09 1.6e-05 26.2 0.0 3 61 316 382 314 405 0.78
2 2 0.05 1.6e+02 3.8 0.1 77 89 787 799 772 799 0.88

Sequence Information

Coding Sequence
ATGACGCTTGTAGTAGCCAAAGTAACATTTCTTCTGGTTGGTGCCCCCTGCGGCCACCACGGCCAGTACACCTTCTACAAAGCGATTCGTCTGTCCGGGGAGAAAGACCGCATCATCGCCATCGGAGACTTCTTCTTCGTGAGGATATGGCAGGATTCTGAGCTGGTGTCCGTCGGCGAGCTGCAGTTGCTGTGGACGGACAGGATCTCGGACCAGACCCTGGTCAGTCTCCGGCTGTACTTCCTGCCGGAGAACACGCCGGACGGCCGCAGCCTGCATGGCGAGGATGAAGTCCTAGCAATCAACGACAAGGTCGTTCTCCGAGCTGAAGATCTGCTCAGCTGGGTGTGCACAGGAGAGGGCTGGCGGTGGGGACTGCGGGCCGTATGGAGAGGCGCGTGTGCCCCCCCTGCCGACCCGCGGCATACCACCCCCCTCCACCACACCAACATAGACTTCAGCGATGTGGAGAGCGAGAAGAATGCCATAGTGGACACAGAAAGCCCAGGCGTGGTGGTGTTCTCGTACCCGCGGTACTGCCGGTACCGGGCTCTGCTGTCGAGGCTCGAAGGCATCCAGGGTGACTGGCTTCGGGACTCGCTGGTAGCCGCGCTGGGCGGGTATGCTGCGCCTACGCACAATACTAGGATATTATACTGCAAGGACACATTCGAATACCCCGAGCTAGAAGGACATGAGTTTGTCTGCAACCACCTCGCGCCCAAACTGAAGGGGCGGCCGCGGGGGCGCCGTCGCCGGCCTCCGCGCGCCGGCTCGCCCTCGCCCTCACCCTCGCCGGAGCCCCCGGCCTCTGCCTCGCCAGAACCGGACTCGGACGACCAGAGGAGCATGCCTAGTGTCGCGACTCCCCGCCGCCTGTCGCTCCGCAACGGGCCAGACAAGCACAGCGACGAGGAGTACGAGAAGAGGGACAGCGCCGAGGACCGCGCCTTCATGGCGTCCCTGAGGCAGTTCTACAGAGAGAGGAACGAGACTATGCACGCCGGGCACACGTTAAAAGACTGTGAGTATTCAGCTATGGTTCTCAAACTTGTGTCGCTCCGCGCGCTGTACgaggcggtgcgcgcgcgcggcggctaCGAGGCGGTGTGCCGCCTGCGGCTGTGGCGCGCGCTCAGCGCCGCGCagccggcgcgcgcgcgccgacACTACGAGAGTCCCGCAGTGTCGCCCCGCGCGCTGTACGAGGCGGTGTGCcgcctgcgcgcgcgcgccgACACTACGAGAGGTAAGTGCTTACAGCACCCGGCACCGTGTAGTCCCGCAGTGTCGCCCCGCGCGCTGTACGAGGCGGTGTGCcgcctgcgcgcgcgcgccgACACTACGAGAGGTAAGTGCTTACAGCACCCGGCACCGTGTAGTCCCGCAGTGTCGCCCCGCGCGCTGTACGAGGCGGTGTGCcgcctgcgcgcgcgcgccgACACTACGAGAGGTAAGTGCTTACAGCACCCGGCACCGTGTAGTCCCGCAGTGTCGCCCCGCGCGCTGTACGAGGCGGTGTGCcgcctgcgcgcgcgcgccgACACTACGAGAGGAGGCGGTGTGCCGCCTGCGGCTGTGGCGCGCGCTCAGCGCCGCGCagccggcgcgcgcgcgccgacACTACGAGAGGTAAGTGCTTACAGCACCCGGCACCGTGTAGTCCCGCAGTGTCGCCCCGCGCGCTGTAGGAGGCGGTGTGCCGCCTGCGGCTGTGGCGCGCGCTCAGCGCCGCGCagccggcgcgcgcgcgccgacACTACGAGAGGTAAGTGCTTACAGCACCCGGCACCGTGTAGTCCCGCAGTGTCGCCCCGCGCGCTGTACGAGGCGGTGTGCcgcctgcgcgcgcgcgccgACACTACGAGAGGTAAGTGCTTACAGCACCCGGCACCGTGTAGTCCCGCAGTGTCGCCCCGCGCGCTGTACGAGGCGGTGTGCcgcctgcgcgcgcgcgccgACACTACGAGAGGTAAGTGCTTACAGCACCCGGCACCGTGTAGTCCCGCAGTGTCGCCCCGCGCGCTGTACGAGGCGGTGTGCcgcctgcgcgcgcgcgccgACACTACGAGAGGTGAGTGCTTACAGCACCCGGCACCGTGTAGTCCCGCAGTGTCGCCCCGCGCGCTGTACGAGGCGGTGTGCcgcctgcgcgcgcgcgccgACACTACGAGAGGTAAGTGCTTACAGCACCCGGCACCGTGTAGTCCCGCAGTGTCGCCCCGCGCGCTGTACGAGGCGGTGTGCcgcctgcgcgcgcgcgccgACACTACGAGAGGTGAGTGCTTACAGCACCCGGCACCGTGTAGTCCCGCAGTGTCGCCCCGCGCGCTGTACGAGGCGGTGTGccgcctgcgcgcgcgccgacaCTACGAGAGATTCCTCCTACCGTACGAGAAACATTCGCGTCGCAACGGGCTCGCTCGCAACGGACGTCTGTTAGAGCCGCGAACCGTGGCCACCATCGACGTGACCGGCTCGCCCCCCCCACCCCCCGCACAGCACAGGGAGATAACGCAGGAAATACCGAAGAGGCTGAGGACGCCGTCGCCTGTGGTGAGTAGAACAAACGGTCTTAACCCCCACATATCCCCCACAGATCAGGGAGACAGGCACCCCCCTGGCACAGGAAGATGGAAATGCGTACGCCCGTCACCTGTAGTGAATGACAGTAGCAACCAAATTTACCCTCCCCCCCCTCCCCCTGGCACAGGAAGATACCCCTCCCTCATACACAAACAGCATCGGAAGATTACGTAG
Protein Sequence
MTLVVAKVTFLLVGAPCGHHGQYTFYKAIRLSGEKDRIIAIGDFFFVRIWQDSELVSVGELQLLWTDRISDQTLVSLRLYFLPENTPDGRSLHGEDEVLAINDKVVLRAEDLLSWVCTGEGWRWGLRAVWRGACAPPADPRHTTPLHHTNIDFSDVESEKNAIVDTESPGVVVFSYPRYCRYRALLSRLEGIQGDWLRDSLVAALGGYAAPTHNTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRRPPRAGSPSPSPSPEPPASASPEPDSDDQRSMPSVATPRRLSLRNGPDKHSDEEYEKRDSAEDRAFMASLRQFYRERNETMHAGHTLKDCEYSAMVLKLVSLRALYEAVRARGGYEAVCRLRLWRALSAAQPARARRHYESPAVSPRALYEAVCRLRARADTTRGKCLQHPAPCSPAVSPRALYEAVCRLRARADTTRGKCLQHPAPCSPAVSPRALYEAVCRLRARADTTRGKCLQHPAPCSPAVSPRALYEAVCRLRARADTTRGGGVPPAAVARAQRRAAGARAPTLREVSAYSTRHRVVPQCRPARCRRRCAACGCGARSAPRSRRARADTTRGKCLQHPAPCSPAVSPRALYEAVCRLRARADTTRGKCLQHPAPCSPAVSPRALYEAVCRLRARADTTRGKCLQHPAPCSPAVSPRALYEAVCRLRARADTTRGECLQHPAPCSPAVSPRALYEAVCRLRARADTTRGKCLQHPAPCSPAVSPRALYEAVCRLRARADTTRGECLQHPAPCSPAVSPRALYEAVCRLRARRHYERFLLPYEKHSRRNGLARNGRLLEPRTVATIDVTGSPPPPPAQHREITQEIPKRLRTPSPVVSRTNGLNPHISPTDQGDRHPPGTGRWKCVRPSPVVNDSSNQIYPPPPPPGTGRYPSLIHKQHRKIT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-