Basic Information

Gene Symbol
Xbp1
Assembly
GCA_950371115.1
Location
OX493330.1:19402040-19404298[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2e-16 2.8e-13 50.7 9.6 2 52 44 94 44 96 0.97
2 2 3e-05 0.042 14.9 2.4 26 55 82 111 81 116 0.91

Sequence Information

Coding Sequence
ATGAGCACACCGATTATCATCACTGTACCCAACAACTATTTGACGGTGGATGAGATGGACTCGAAGGTTATAGTCGACGTTTCATCACAGCCACCGTCAAGGAAGAGGCGTTTGGACCATTTATCATGGGAGGAGAAGATGCAAAGGAAGAAACTAAAGAATCGCGTGGCGGCGCAGACGTCACGGGACAGGAAAAAGGCTAAAATGGACGAGATGGAACATAAGCTATCGCTTCTTGCCGAGGCCAACGAGCGGCTGACGAGCGAGATGGCGAGTTTGAAGGCGTTAAACGAGCGTTTGTTGAGCGAGAACGCATCGCTTCGCAGCGAGGCGGCGGCGCGGACCGTCGCGGGGGCCCCAGGACCGGCAGAGTCTACTCCTCGGCAGAAGGAGGGGCCCCCGCAGGCGATCCGCGCGGCGCGCCTGCTGCTGGCGATGTGCCTCCTCTCGCAGACATCCTCGCACACCTCGACTCAGAAGAGTACCTCGACACCCTCAATCAACTTGCAGAGTCCCTCCTCAAAGAAATTGATGCAGGTTCTGCAGGAGCGGTTGAAGatGTCCCAGACCGGTTCCCTGGAGAGCGCGCTAAAGGAACTCAAGTGGTGGGGCCCGCAGCAGAGCAACTGGAATCCGCACTCGTATGCGCATCCTTACACGCCCGACATAGTAGTTACTGAACCCACAGACAAGGAAGAACTGGGCAGCGACAAGGGAGACATCTTTTATACAAGCTTTGATGAAGCCAACGACTGCATCACCATCGAAGTGCCATGTGAAGACCAAATCGTCGAAGAGGTCACACCTATAGAAGTTGAAACAGACTTTACCACAGACAAGACCGGAGTGGCTCTCGAGTGTGACCTCAAAATGCTGTCACCCATGAGTCTATCTCCCAATTCAGTAGAGGAGAACCTACTTTTATCTCCTACACACACCAGCGTCAGCTCCGACCTCGGATACGAGTCTTTGGCATCCCCTCTCAGTGAGCCCGAGTCAATGGACTTGTCAGATTTTTGGTGTGAATCATTCTCAGAATTGTTCCCTGGCCTTGCGTGA
Protein Sequence
MSTPIIITVPNNYLTVDEMDSKVIVDVSSQPPSRKRRLDHLSWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEHKLSLLAEANERLTSEMASLKALNERLLSENASLRSEAAARTVAGAPGPAESTPRQKEGPPQAIRAARLLLAMCLLSQTSSHTSTQKSTSTPSINLQSPSSKKLMQVLQERLKMSQTGSLESALKELKWWGPQQSNWNPHSYAHPYTPDIVVTEPTDKEELGSDKGDIFYTSFDEANDCITIEVPCEDQIVEEVTPIEVETDFTTDKTGVALECDLKMLSPMSLSPNSVEENLLLSPTHTSVSSDLGYESLASPLSEPESMDLSDFWCESFSELFPGLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00034448;
90% Identity
-
80% Identity
-