Acro037395.1
Basic Information
- Insect
- Anania crocealis
- Gene Symbol
- ken
- Assembly
- GCA_949315895.1
- Location
- OX438883.1:25274319-25288926[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.5 1.7e+02 4.2 1.2 3 21 458 476 456 480 0.91 2 13 0.0012 0.13 14.0 1.2 1 20 501 520 501 525 0.90 3 13 0.068 7.6 8.5 2.7 1 23 539 562 539 562 0.93 4 13 0.024 2.7 9.9 1.7 1 22 567 588 567 591 0.88 5 13 7.1 7.8e+02 2.1 0.9 2 23 612 636 611 636 0.74 6 13 0.0083 0.92 11.4 0.1 3 21 643 661 642 662 0.94 7 13 0.0039 0.43 12.4 2.0 1 23 721 742 721 742 0.96 8 13 4.6e-06 0.00051 21.6 0.3 1 23 748 771 748 771 0.96 9 13 0.0003 0.033 15.9 1.4 3 20 798 815 796 817 0.93 10 13 0.0036 0.4 12.5 0.1 3 23 823 845 822 845 0.95 11 13 0.1 11 7.9 5.0 1 21 852 872 852 874 0.95 12 13 0.0068 0.75 11.6 2.5 1 21 880 900 880 905 0.92 13 13 8.7 9.6e+02 1.9 0.2 1 22 911 932 911 934 0.89
Sequence Information
- Coding Sequence
- ATGCTGTCACCACGCGACGACGAAGATGATGACAACCATTTGTGCATCAAATGCAACGCCACCATCGTCGGACTCGATAACTACGTCAAACACAGAAAAGAAAGATGCGGAAAAACCACCAAAAATTCTACCTCAAAACCTGACATCCCTAGTATCGATACTCTAGACCCCTACAGTCTTGGTGCTGATGTCTTCTTCCAATCATTAGAGCTGCAAAGCAGTGTCAAGAAAACTTCTTTATCCAGATTAACACCCCCCATATCAAAAGCAGCGCTAGACACAAAAACTACTCTTGTTGAAGCATCCACTTCAAGACATATCCCGCGCATGAGCCCTTTAACAAATCTAAGAGAAGAAGACTGGATAGGAGAACCTAGTCTTAGAATCAATAGCAATGAAGACAatcaaacaaaactaattaaCGCAGTTGCTAGTATCAGTGGAACCGCAAAGAAACATGTTCCCACGTCAACTTACAGTATTTCCAATTATAACGACTACAAAGGTGATGTAGATTTTGATGAATCTGATGAATTGGAGGATGACGATGAAGAAGAAGTTATTAATGCTAATGAGAAATGGAAACCGTCTCCAAATTATACTGGTGGCAAATGGCGACCAGCTTCACCAGACCATGAAGATTGGGATATGAGGGAAGAACAAGAGCACACTGGAGGGAAATGGAAGCCTATCATGACTGACAGTCATGAACGAGATGACGATTATGACGCTCCTCCTCCAGGACACACCAAAGGCAAATGGGTACCGGGCCATGAAAAAACACAAATCATGCAAACAACGATACAAAATAAGGGTGCGGTTCAGTATTGGTGTGGACCGTGTAATCGTCGACTAGGATCTCGGGCTATTTATGAAAAACATCTTATGTCCGGATTGCACATGAGGAAAGTCCTTCCGGAACATGAACTGGAATTCTCTGGTCATCTTGAGCCAATGCGTCCTGTTGACAAAAGAATGTTACGCCCATCTCGGTTCACAAATGACACAATTTACGCTGGAACTCAaaagaaaaaaccaaaaacacctAAAACCAAATTGGgcgtaaaaaatgaaaagaaaaaaagaaaaagaaaacctGCTTATGTGAATTGTTCTGGCTGTAAATCACGAGTTAGGCTGCATTTGATGGGTAAGCACCTGATTTCTCATTATCACTTTCGAAAAGTGACTAACATCAAAAGTGACGCCTATCAGCAACTGATACTGGATAATATTGATGCCATAGTTCACCAAGCGCCTTTCCAATGTAGCCCTTGCAAGTTCTATACAAATTGGCTTTCCACCTTCATGCATCACTGGTATTCAGAGGAACACAAATCTAAAACTGATTCCTTAGAAGGAAGATATTGGTGTTCCTTTTGCAAATACGAATGCAGCTCATCTCAAAGTATGGTTGAGCATATGTCGGGTTCTGATCACAGTGAAGTTGTGGCAGTCATAAACAGGTCAATGCcaataataataagaagaaGGACAATCTTTAAATGTGAGACATGCAACGAAGAGTTTCGCTACAATATCGAATTGAAGCGGCACAGCACCAGGACTGGGCACAAACTGCCATACACGGCAACTGATGACTATCAAGAGCTTCACAATTGTCAGTTTTGTAAAGCTAAATTTAAAACTTCCTTGGCACTTGCAGcacatttaaaattcaaacataAACAAAAGGAATACCTCTGTTTAGTGTGCTCAAAGATGTTTAAAACCTCAGAAGAAGCGAAACATCATCGCTATACACTGGAACATAGAATTAGAAAGCATGAACTAACCAAGGAGAAAGGATTAACTTCCAAAGATTTAAGTAAGAAATGTCCATACTGCACTGAGgttacatttttaaacaatgttttagAATTGAAAGAGCATATAAGAGTCGAGCACCCAAACATCAAAAAGAACTGCCCTAAATGTGGCATGTCTTTCATCTTCCCCCAAGAAGTGAGCCGTCACCTCAAAAACAACGCTTGTCAGTTCCCAGCAACGAGCACTCTCAGCTCCTCAATCGTATGGAACTGCAGCCAATGTCTCTTCGTAACCGATTCCCAAGCCGAATGCTACTACCACGAAACACTTCACGGGGAGGTTATAAAGGAAATCTGCAAATCTGGTGACAAGGACAAAGTGGTCTTGAAATACGCCTGTCCTTTGTGCACCAAGTTCTTCAAGAAGCAGTCGCTCCGTAGTCACCTGAAACTCCACACATACGAAAGGCCCTTTGTCTGTACCATTTGCGGTGCGAACTTCTCCAGACAATCTAGTCTGGCCAACCACACTAAGAACGTACATGGGGATGGCGCTGGTAAGATCAAGAAGATGAAGAAGCTAGTGATACCGGTGCCACACTCTCTGAAAGACACGTGGGCATGCTCGAAATGCTCGAAGACGTTCACTAACCGGAGCGCGTTGAGTCGTCACGAGTGTGACGCAGGCGACCGCAGCTGTCCGCGCGAAGGCTGTTCGTATGTGGCCGCAACACCATCTCTTCTAGCCAGGCACCGAAGAACTCACGGAGAAAAAGTGAAATACCATGAATGCAAGCTGTGCCCCTTCCAGACGGACCAGGCCAGTAACTTCAAGAGGCACCTTAGATGTCATGAAGGCGTGAAACCGTATTTTTGCCCACATTGTGACTTTACATGTGGTAGTTTGGAAAACCTTCGCAAGCATGCACTTCGAAGTAGTGTCCACGCAGGCGCGCCACTCTACAGTTGCAACGCGTGCGCATTCCACACCAACATGGCCGCCGAACTACGCAACCATCTAGTAGCTGATCATGGAGAGAAATAcgacaaaaaaactgttatacAGGCTGTCAAGCTATGGCTTATGACGAAGAAAGAATGA
- Protein Sequence
- MLSPRDDEDDDNHLCIKCNATIVGLDNYVKHRKERCGKTTKNSTSKPDIPSIDTLDPYSLGADVFFQSLELQSSVKKTSLSRLTPPISKAALDTKTTLVEASTSRHIPRMSPLTNLREEDWIGEPSLRINSNEDNQTKLINAVASISGTAKKHVPTSTYSISNYNDYKGDVDFDESDELEDDDEEEVINANEKWKPSPNYTGGKWRPASPDHEDWDMREEQEHTGGKWKPIMTDSHERDDDYDAPPPGHTKGKWVPGHEKTQIMQTTIQNKGAVQYWCGPCNRRLGSRAIYEKHLMSGLHMRKVLPEHELEFSGHLEPMRPVDKRMLRPSRFTNDTIYAGTQKKKPKTPKTKLGVKNEKKKRKRKPAYVNCSGCKSRVRLHLMGKHLISHYHFRKVTNIKSDAYQQLILDNIDAIVHQAPFQCSPCKFYTNWLSTFMHHWYSEEHKSKTDSLEGRYWCSFCKYECSSSQSMVEHMSGSDHSEVVAVINRSMPIIIRRRTIFKCETCNEEFRYNIELKRHSTRTGHKLPYTATDDYQELHNCQFCKAKFKTSLALAAHLKFKHKQKEYLCLVCSKMFKTSEEAKHHRYTLEHRIRKHELTKEKGLTSKDLSKKCPYCTEVTFLNNVLELKEHIRVEHPNIKKNCPKCGMSFIFPQEVSRHLKNNACQFPATSTLSSSIVWNCSQCLFVTDSQAECYYHETLHGEVIKEICKSGDKDKVVLKYACPLCTKFFKKQSLRSHLKLHTYERPFVCTICGANFSRQSSLANHTKNVHGDGAGKIKKMKKLVIPVPHSLKDTWACSKCSKTFTNRSALSRHECDAGDRSCPREGCSYVAATPSLLARHRRTHGEKVKYHECKLCPFQTDQASNFKRHLRCHEGVKPYFCPHCDFTCGSLENLRKHALRSSVHAGAPLYSCNACAFHTNMAAELRNHLVADHGEKYDKKTVIQAVKLWLMTKKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00076021;
- 90% Identity
- iTF_00077056; iTF_00076021;
- 80% Identity
- -