Acro025139.1
Basic Information
- Insect
- Anania crocealis
- Gene Symbol
- -
- Assembly
- GCA_949315895.1
- Location
- OX438875.1:6907242-6917590[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.18 19 7.2 0.1 1 23 8 29 8 29 0.90 2 18 1.2 1.3e+02 4.6 1.4 1 19 34 52 34 54 0.87 3 18 2.2 2.4e+02 3.8 1.8 2 13 65 76 64 78 0.89 4 18 2.5e-06 0.00027 22.5 0.5 2 23 107 129 106 129 0.96 5 18 0.46 51 5.9 3.4 1 22 135 156 135 159 0.90 6 18 1.4 1.6e+02 4.3 0.7 1 23 222 245 222 245 0.92 7 18 0.14 16 7.5 0.5 2 23 317 338 316 338 0.97 8 18 0.023 2.5 10.0 0.0 1 23 342 364 342 364 0.95 9 18 0.17 18 7.3 3.0 1 23 369 392 369 392 0.96 10 18 0.33 37 6.3 1.1 2 23 400 422 399 422 0.91 11 18 0.00026 0.029 16.1 1.1 2 23 430 452 429 452 0.96 12 18 0.0059 0.65 11.8 3.2 1 23 458 480 458 480 0.97 13 18 3e-05 0.0033 19.0 2.3 1 23 486 508 486 508 0.99 14 18 0.25 28 6.7 0.9 1 13 514 526 514 528 0.90 15 18 1 1.1e+02 4.8 0.4 1 23 600 623 600 623 0.92 16 18 0.11 12 7.8 0.1 2 23 651 673 650 673 0.95 17 18 0.031 3.4 9.6 0.1 2 23 696 717 695 717 0.95 18 18 0.014 1.6 10.6 0.2 1 23 721 744 721 744 0.94
Sequence Information
- Coding Sequence
- ATGAACACAAATTATAGGAATTATGTCTGTGGCATGTGCGATGCTGGCTTCTCAAGGACTGTCCTTATACACCACATCGAAGCTCACAAGATCGGTATCTTCCGATGCGATTTCTGCGAAAAAGACTTCGACACGTTCCGTATGAAAAAATCCCACGAGGAATGTGTGCATATACATTCAAATTTGGTAAACAAATGCGGATATTGCAATGAGAAATTCAAGCAGTATAAAAAGAAGGAAGAGTATATTGCAAAAGTACACGGTGTTCCCAGTTTAGAATTGATTGCAAAAGGTCACGGtgtttctaatttaaaattgaagTGTCCAGATTGCGAGAAAACGTTTGCAAGCAAATGGCAGTTGACCATTCACACGAAACGCGATCACTTGATGGAGAGAAAGTACAAGTGCAGGCAGTGTGAGATGAAGTTTTTCAAGACGTTCCAGTTGAAagaccataataatatgttaaaacaCACTGGTGTACCTCTGAGACTGACACGTACCATCAAACCCGAATGGGAATTAAAATCGAAAGAGGCAAAGTTAAAAAATGAAGAATTCTTACGCCAAATCCCTGAACTGGATAAACATCGCACCAACATACGAATGATACTTGAACACTCGAACGCGACGCCTATCAGATGTCGCGGGGGCATCGGATACGCCTGCTGCTTTTGTTCCGATCAGTACCCTGACCCCGCCGATCTCAAAACCCACACACTAGAGAAACACGACGAGAAAGCCAAAGTCAAGTTTATGAAAGGAAAAATGATGTATTCATTTCTGGTCAAACTGGACATCACGTCTTTACGTTGCACCGTCTGCAGCGACCCCATCAACACTGTAGAAGAACTTGTCGAACACCTAATCAAAGTTCACAACAAGAGATTGTTTACGGATATCAAAAGCCATATCCTGCCTTTCAAATTTGACGGCGATACGCTGAGATGCGTCATCTGTACGAGcatattcaataaatttaaagttcttCTAGAACACATGAACACACATTATAGGAATTATGTATGTGACGTGTGCGATGCCGGCTTCGTCTCAAGAAGTATCCTTATGAACCACACCGAAGCTCACAAGACCGGTGTCTTCAAATGCGACTTCTGCGAAAAAGGTTTCGACACGTTCCGTAAGAAAAAATCCCACGAGAAATCTGTGCATATACATTCAAACTTGTTGAACAAGTGCGGATATTGCAGTGAGAAATTCAAGAACTATAGAAAGAAGGATGAGCATATTGCAAAAGTACACGGTGTTCCCAGTTTAGAATTGAAGTGTCAGGCTTGCGAGAAAACGTTTGCAAGCAAAACATCGTTGACGATTCACACAAAACGCGATCACTTGATGGAAAGAAGGCACAAGTGCGGGCAGTGTGAGATGAAGTTTTTCAAGACGAGCGAGTTGAAAGAGCACATGGTCAAACACACTGGTATGAGGCCGTTCCAGTGTTTTGTCTGCTTCAAGTCGTACGGGAGGAAGAAGACTCTGAACGAGCATATGAGGATACACGTGGACGACAGAAGATTCAAATGCGAACATTGCAAGAAACGATTGACCAGATCCCGTGGGAAAAGCACCGATGAGAAGCTGGTCCTGAACAAGCGCGTCAACTTCTCCACATTTATCAACATCAAGCCTTCAAGCGGAGGGAGGGTCCGCCACGTCGAGCGCTCATCCCAGAAGCAGAAACGTCTCACCGAGCTAGATCTGCACTTTGATAATATCAAAACTGTCGTACGATGCTCAAATGCTACACCCATCCGCTGCAAAGTGGGCGATCGCTACGCGTGCGGTTACTGCCTCGACCAATACATGGACCCTCGTGAATTGAAAAAGCACACACTGAATAAACACAGAGATTCAGATGACAAACTAGAATGCCTCAACATTCGGTCTCTCTCCCGTTACAGTGTCCATTTAGACATCACTAACTTGAAATGTACTATTTGCAACGACAGCATCAACCGCTTGGAGGACCTGATCGAACATCTGAAGTTGGAGCACGATGAACCGATACATTCTCATATCAGGAACCTTCTGGTCCCGTACAAGTTTGAGAGCCTTCAGCTGAGCTGCGCGATCTGTCTCCAGGAGTTTGATGAGTACAGCGACCTCCAAGAGCACATGACGGAGCATTACAGGAACTATGTCTGCGAGTTTTGCGATAAAGCGTTTATAATGAGGAGTGTGATGGTCGATCATAAGAAAAACGTGCATCGTGTTTGA
- Protein Sequence
- MNTNYRNYVCGMCDAGFSRTVLIHHIEAHKIGIFRCDFCEKDFDTFRMKKSHEECVHIHSNLVNKCGYCNEKFKQYKKKEEYIAKVHGVPSLELIAKGHGVSNLKLKCPDCEKTFASKWQLTIHTKRDHLMERKYKCRQCEMKFFKTFQLKDHNNMLKHTGVPLRLTRTIKPEWELKSKEAKLKNEEFLRQIPELDKHRTNIRMILEHSNATPIRCRGGIGYACCFCSDQYPDPADLKTHTLEKHDEKAKVKFMKGKMMYSFLVKLDITSLRCTVCSDPINTVEELVEHLIKVHNKRLFTDIKSHILPFKFDGDTLRCVICTSIFNKFKVLLEHMNTHYRNYVCDVCDAGFVSRSILMNHTEAHKTGVFKCDFCEKGFDTFRKKKSHEKSVHIHSNLLNKCGYCSEKFKNYRKKDEHIAKVHGVPSLELKCQACEKTFASKTSLTIHTKRDHLMERRHKCGQCEMKFFKTSELKEHMVKHTGMRPFQCFVCFKSYGRKKTLNEHMRIHVDDRRFKCEHCKKRLTRSRGKSTDEKLVLNKRVNFSTFINIKPSSGGRVRHVERSSQKQKRLTELDLHFDNIKTVVRCSNATPIRCKVGDRYACGYCLDQYMDPRELKKHTLNKHRDSDDKLECLNIRSLSRYSVHLDITNLKCTICNDSINRLEDLIEHLKLEHDEPIHSHIRNLLVPYKFESLQLSCAICLQEFDEYSDLQEHMTEHYRNYVCEFCDKAFIMRSVMVDHKKNVHRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -