Acro030197.1
Basic Information
- Insect
- Anania crocealis
- Gene Symbol
- -
- Assembly
- GCA_949315895.1
- Location
- OX438880.1:5892587-5920727[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 6.6e-06 0.00073 21.1 0.6 1 23 202 224 202 224 0.98 2 28 0.00053 0.058 15.1 0.4 2 20 267 285 266 287 0.93 3 28 5.5e-05 0.0061 18.2 0.4 2 23 317 339 316 339 0.96 4 28 0.031 3.4 9.6 0.4 1 23 394 417 394 417 0.96 5 28 0.019 2.1 10.3 0.1 1 23 433 455 433 455 0.95 6 28 1.2e-05 0.0013 20.3 1.4 2 23 493 515 492 515 0.95 7 28 0.00089 0.099 14.4 2.0 2 23 560 582 560 582 0.97 8 28 0.025 2.7 9.9 1.4 1 23 632 655 632 655 0.96 9 28 0.018 2 10.3 0.1 1 23 711 733 711 733 0.97 10 28 0.033 3.7 9.5 4.6 2 23 745 766 744 766 0.96 11 28 0.039 4.3 9.2 1.8 2 23 778 799 777 799 0.96 12 28 0.004 0.44 12.4 2.2 1 23 809 831 809 831 0.98 13 28 2.6 2.9e+02 3.5 5.8 2 23 861 882 861 882 0.96 14 28 0.0023 0.25 13.1 2.5 1 23 893 915 893 915 0.97 15 28 6e-05 0.0066 18.1 0.5 1 23 923 945 923 945 0.97 16 28 0.00079 0.088 14.6 0.4 2 23 965 987 964 987 0.97 17 28 0.68 75 5.3 0.4 1 23 1005 1027 1005 1027 0.92 18 28 0.15 16 7.4 2.9 1 23 1034 1056 1034 1056 0.97 19 28 0.062 6.9 8.6 4.4 2 23 1067 1089 1066 1089 0.95 20 28 0.0016 0.18 13.6 0.2 1 23 1111 1133 1111 1133 0.97 21 28 6.9 7.6e+02 2.2 0.3 2 20 1137 1155 1136 1156 0.89 22 28 0.0024 0.27 13.0 0.5 1 23 1213 1235 1213 1235 0.96 23 28 0.017 1.9 10.3 0.8 2 23 1274 1296 1273 1296 0.95 24 28 0.86 95 5.0 4.4 2 23 1313 1331 1313 1331 0.91 25 28 0.48 54 5.8 1.8 2 21 1335 1354 1335 1355 0.93 26 28 0.22 24 6.9 0.5 2 23 1404 1425 1403 1425 0.93 27 28 0.0036 0.4 12.5 0.6 2 23 1436 1458 1435 1458 0.96 28 28 0.16 17 7.3 3.0 2 21 1496 1515 1495 1516 0.94
Sequence Information
- Coding Sequence
- ATGGCTCTCAAGCTCGGGAAATGCAGACTTTGTCTGAAGCTTGGCGACTTTTACTCCATCTTTGCGGTGGACAATGCCATCCAGCTTGCGGAGATGGTCATGGAATGTGCCCGGGTAaaaGTATATGAAGGTGACGGGCTACCGGATAAGATCTGCTCAGAATGCATCCAGAAGTTGAGCAGTGCTTACATCTTTAAACAACAGTGCGAGAGGTCGGACCAGGAGCTCAGACGGAATTATGTGCCGCCGCCCGGTTTCAGTGTCACGCCACCACCAGCGCCTAACAGGCAGAGCAGCGACTCTGCGTTCTCGTCGCAGACGGACGTTTCGAACCAGACGAAGCCGTCGAGTTCGAACGATGCGTCGGTCACGCCCGCCGGCCGCGGTCGCAAGCGCAGCAGGGAGAGCGTCGACAACACGTCGGTCAGTAGCCGCTCGCACGACTACGCGCCGGCCACAAAACGGGTTTCGGAACTGCGCGACTCGCAGAAGAAGAGACGACCCAACAAGTCCTACGAAGATGATTCGGACTACGAGGACAACTTGTCCACGTCTCAGTTTTCGGCGGGCACGGATTCGGACGAACCGCTGATCAAGCAAGCGTTCCAGTGCAAGAAGTGCGATAAATCGTTCGCGAGCGCCAAAAGTCTCGCCGCTCACAGCAAAGTGCACTACAGGAAGGACAATTTGGCTCAAAATCagGTGGTAAGCATCCCCGTTGAATCGCCTGACGAGCAAGCGGTCGAACTAGCGGGCGAAGTAGCGGGCGAGGACGCTATGGACGAGGACGACAAGTTGTCTTGCGACAAGTGCGGCAAGACCTTCAAGCTGAAAATCATGCTGCGGCGGCACCGCGACCTGTGCGGCGTGACCCCGGCCCAGGCACCGACGAAGGAACTACTGATATCGCTGGAACCCATCGACGCGGTACAACAACCAAAGAAGATCGAATGCGACATATGCACCTCTAAGTTCAAAACGCTAGACAATCTCAACAAGCATCTCCGAGTCGTCCATGCGGCGGCCCCTAAGCAGGAACCTTCCCCTGTGAAAGAGAAGGAGAAAGAGAAAGACAAGAAAGTGTCAGTGCCCTGCATATTCTGTAGGAAACAGTTCGATGACTACTACGTGTATACTGCCCATCATAATAGCTGCAACAAGCGACGAGAGCTGGAGATATTTACTTGTCCCGTTTGTAAGCGAGCTTCAGGCAAGCGTAGCGCTTTCTTCGTCCACGTGAAGAACTTGCACTTCGAGCGCGGTTTATCCGGGCGCGCGCAGCCGACGGCCGAGGCCTTCGACTGCCGCATGTGCAGCAAGCGGCTCGCGTCGCAGGCGCAGCTCATCACGCACCTCGCCGCACACATGTCCAACATAGACGAGCCGGACGACGGGAACTCGAGGGCCAGTACAATAGAAGATTCCGCGTCCGTAACATCAGAGTACGGCTCGAAGTACGTTTCGAACGGACCGCTCAAATGCACCATCTGCGACAAGCGGTTCACGTACAAGAAGTCCCTGGTGACGCACATGGACAAGGTCCATTCGGACATAGAGGTTCCAGTCAAAGTGGAACCGCCGGACTTGAGTATAGAACAGGAGGACGATCCGAATTTACTGAGCGAGACGCGAGCGCCCTCCGAATCGGATTCTAGTCAGGACGAAGGGGACGACAACACGTGTGATATATGCGAGAAACAGTTCTCGTACAGGCGGCTGCTCATACAGCACAAGAAAACCAAACATAACCTCAGTTCCGGAACTAAGCGGGCCAAGATTACCTTGAAAGATTGCTCAGTTCGGTGCCTAATCTGCGATTTGGAGATGAAAGTGAGCGCCATAAACGAGCACAATCAGAAGCACATCTCCGTGAACATCAAGCCGCGGAACGTGTACACGTGCGCCGAGTGCTCGGATAAATTCAAGAGCTGTAGCGCGCTGGCGAGCCACATCAAGTTTATTCATAGATTGAAACAGCCGCGTCCGCTGAAACCGCCCCTAGCCCTCGAAGGCGGTTCGGAGCTGGCGGATTTTTGCGAGGTCGTTGTGACTAAAGCGGAACCCCTGGACGCGCTCCAGGGTCACAGCGACCGGGGCGGGGTTCCGCGCGCCGAGGTGGCCGCCGCCGGCTTCACGTGCCCGCTGTGCGGGAAGCTCATGCCGACCCTCATATCGCTCAAGCGGCACGTCAACTGGCACACGTATAGAGGGAAGGATCTAGAGAAGAAGATCGAGTGTTTCGTCTGTAAAGAGGAATTCCGTTTCCAATGTCACTACAAGCTCCACATGCGTGGGCACTACCGCGACACGGAACTGGACCCGAAGCATCTCACGTGCCCCATCTGCAACCGCAAGAGCAAACACCTGCGGGCCGCGCAGATGCACATGAAGTACCACAAGCAGACGCGCTTCAACACCGCCGACTACCAGTGTTCTATCTGCAAACGAGTCTTCCAGCACAGAAAAGTCTACCTTTCGCACATGGCGATACATTTCAAGCGCGGCGAGAGCGGCCAGAACACGATAGTAGGGGACATACTCCCCAACAACGTGGACAAGACCAGGTTCGATGGCACCAACACCTGCCATCTCTGCGGGAAGATTTGCGACTCGGAGAACTCGTTGAAGTGCCACGTGCGATGGCACAACTCGAAATCTTCGCTGTACGGCGCGAGGCACGAGTGCTTCGTCTGTCAGCTCGTGTTCACGAACAAACGCCGGCTGGAGATACACACTCGGTCCCACTACGAGGACGAAAACGGACCCTTCAAGTGCACCATTTGCGGGAAGGGCTACATCGACGAGGAGTACTTCCGGCGACACGTGAAGGGGCACAACTTCGATCACCAGTCCCACAAGGATAGGATCGATAAGCTGAGAAAGGATAAGGTCAAGTGTCCTATTTGCGCGCGCTTCTATCCTGATCTGATACATCTGATCCGGCACTTGCGCCGCACGCACCCGGAGAGCAAGATGATAAAGACGGACCCGGACGCGCCGCCGCCGGTCTACTTCTCGTGCAAACTCTGCGCTAAAGTGTTCCTCGACGAACGGAGACTCCAGAAACACGAGGAGGCTCACATGCGGAAGCCTCTGTTCTTCAAATGCAAATTCTGCGGAAAAAACACCATTTCGCTCAAGAATCACAACGTACACATCAAGGGTCATTTGACGCAGAAGTACTTCGATAATCCGTTGAAATGCATGCACTGCGACGAGAAGTTCGTGAAGGGTTACGACTTGCACCACCACCTGCGGGACGTCCATCAAATAAACGAGACGTGGATCGCGGAACGGACGGAGCCCACGCTGAACGGGCCTCTGAAAGAGTTCCAGTGCGCGATATGCCTGAAAGTCCTCGCCAGCAAAGGAAACTTCGAGAGACATATCGATTACCACAACACGCTAAGGTGTAACTACTGTTTCGACTTCTTCAGTACGCTCAGATTTTTGGAGGGCCACCTCGCATTCAGCTGCGAGAAGAAAAAACTCATCGGCGACACGGAGATTTatcctaaaaaaattaaatgccaCTCCTGCTACAAGGCGTTCCATTTACAAGTGAAGTTGGACTGCCATCTCCGCACGCAACACGGGATCAAAGTGTGTAAGGAGGCGTCGAGCGGCAAGAAGGAATTCGTGTGCGACTACTGCTTCCGCGTGTTCGAAAACGAAGATTCTCTAACGGGCCACAAGATCTACCATCGAACCATTGGGTACTACGGATGCATTTACTGTAAGCGTAAGTTTAACACGATGACAGTTTACAGAAAGCATAAGAATCACCATTTCTCGCAGCTCAACGTCGACAACCCGACGAAATGCGAACACTGTGACGAGACTTTCGTTGCGTTCCGCGAGATGATCTATCACATGCGCGACGTACACGGCGACGATAAAGAGTGGATCATAATGCCGAAAGACTCCATCGAGGAGACGTGCAAAATTTGCAACAAGACATTCTTCAATCTCCACAGACATTTGGAATACCATGAAGAGAATAGATGTAAAAAGTGCGGCGAATACTTCTTTTCGAGAGTCGATTACGATAACCATCTTTGTTCGATAGAGAGCGACGACGAGAGCGGTGTACAAAATGAAAATAGCCTCCTACCAGCATACGAGGAGTGCAGGTTCTGCTTCAAGCCGATCACTAGAAAGTCCTCGAAACGGAAGCACGACATCATCCACAGGGGGTCCGGTTCGATATCCTGCCGGTTCTGTCCtctcaaattcaaaacaatgGACGCTTTCAACATCCACGCGTTCTCGCACCGCAGCAGAAAGTACAACAAGAAGCCGATAAAGTGTCGGAAGTGCGGGGAGAAATTCGTGAAATACGGGCCGTTTATAAAGCACATGAAGAACGTCCACAAGTCGACGAAGAAGGTCCACTACCGCGCGACCGTCAAGCCGGAGCGCTGCGTCGTGTGCGGCGACGAGTTCCCGAACTTGCACAACCACTACCGCGCGCACCTTCTGAACCAGTGCCAGCAGTGCTCCAAGTACTTTACATCGGCGAAACTGTTTTCACAGCACCAGTGCGACAAAGAAGATTCTGATCCGTCGAAAGTGTTCGTGTGCGACGAAAATCTCGTAGCGCTCATTAACTCGTACGTTCCTAAAGACGTGCATGACGACGAGAAATTCTACGGAGGCTCCGCCGATGAGGAAGAAGAAACGGCCGAGGCAGCCGACCCAGTCGCGGAGAAGAAGGAGCAGAAGCCAAGGATGTCTGTGCTGGACGAAGACAGTCAGACGGCCGACCTGGACGCCATGACCTTTTCTCAGGACGAAGCTAGTCAGGACGAAAAGGAACTCCATCAGATGGTGTCTTCCCCCATCATTTCTGACGTATTGTCGCTCTATCAGCAAAGTAAGCAGAAAGAGGATGGAAAGCAAATTGTCAACGATAAAGATATCGTCTCGCTAATTGATGACGACTCTATGGACATGATGGACGTTAACGTGAACATTCCCATCATCACGATTGATTAA
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFAVDNAIQLAEMVMECARVKVYEGDGLPDKICSECIQKLSSAYIFKQQCERSDQELRRNYVPPPGFSVTPPPAPNRQSSDSAFSSQTDVSNQTKPSSSNDASVTPAGRGRKRSRESVDNTSVSSRSHDYAPATKRVSELRDSQKKRRPNKSYEDDSDYEDNLSTSQFSAGTDSDEPLIKQAFQCKKCDKSFASAKSLAAHSKVHYRKDNLAQNQVVSIPVESPDEQAVELAGEVAGEDAMDEDDKLSCDKCGKTFKLKIMLRRHRDLCGVTPAQAPTKELLISLEPIDAVQQPKKIECDICTSKFKTLDNLNKHLRVVHAAAPKQEPSPVKEKEKEKDKKVSVPCIFCRKQFDDYYVYTAHHNSCNKRRELEIFTCPVCKRASGKRSAFFVHVKNLHFERGLSGRAQPTAEAFDCRMCSKRLASQAQLITHLAAHMSNIDEPDDGNSRASTIEDSASVTSEYGSKYVSNGPLKCTICDKRFTYKKSLVTHMDKVHSDIEVPVKVEPPDLSIEQEDDPNLLSETRAPSESDSSQDEGDDNTCDICEKQFSYRRLLIQHKKTKHNLSSGTKRAKITLKDCSVRCLICDLEMKVSAINEHNQKHISVNIKPRNVYTCAECSDKFKSCSALASHIKFIHRLKQPRPLKPPLALEGGSELADFCEVVVTKAEPLDALQGHSDRGGVPRAEVAAAGFTCPLCGKLMPTLISLKRHVNWHTYRGKDLEKKIECFVCKEEFRFQCHYKLHMRGHYRDTELDPKHLTCPICNRKSKHLRAAQMHMKYHKQTRFNTADYQCSICKRVFQHRKVYLSHMAIHFKRGESGQNTIVGDILPNNVDKTRFDGTNTCHLCGKICDSENSLKCHVRWHNSKSSLYGARHECFVCQLVFTNKRRLEIHTRSHYEDENGPFKCTICGKGYIDEEYFRRHVKGHNFDHQSHKDRIDKLRKDKVKCPICARFYPDLIHLIRHLRRTHPESKMIKTDPDAPPPVYFSCKLCAKVFLDERRLQKHEEAHMRKPLFFKCKFCGKNTISLKNHNVHIKGHLTQKYFDNPLKCMHCDEKFVKGYDLHHHLRDVHQINETWIAERTEPTLNGPLKEFQCAICLKVLASKGNFERHIDYHNTLRCNYCFDFFSTLRFLEGHLAFSCEKKKLIGDTEIYPKKIKCHSCYKAFHLQVKLDCHLRTQHGIKVCKEASSGKKEFVCDYCFRVFENEDSLTGHKIYHRTIGYYGCIYCKRKFNTMTVYRKHKNHHFSQLNVDNPTKCEHCDETFVAFREMIYHMRDVHGDDKEWIIMPKDSIEETCKICNKTFFNLHRHLEYHEENRCKKCGEYFFSRVDYDNHLCSIESDDESGVQNENSLLPAYEECRFCFKPITRKSSKRKHDIIHRGSGSISCRFCPLKFKTMDAFNIHAFSHRSRKYNKKPIKCRKCGEKFVKYGPFIKHMKNVHKSTKKVHYRATVKPERCVVCGDEFPNLHNHYRAHLLNQCQQCSKYFTSAKLFSQHQCDKEDSDPSKVFVCDENLVALINSYVPKDVHDDEKFYGGSADEEEETAEAADPVAEKKEQKPRMSVLDEDSQTADLDAMTFSQDEASQDEKELHQMVSSPIISDVLSLYQQSKQKEDGKQIVNDKDIVSLIDDDSMDMMDVNVNIPIITID
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00075787;
- 90% Identity
- -
- 80% Identity
- -