Acro025128.1
Basic Information
- Insect
- Anania crocealis
- Gene Symbol
- -
- Assembly
- GCA_949315895.1
- Location
- OX438875.1:6827712-6833190[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 6.5 7.2e+02 2.3 0.2 2 11 44 53 43 66 0.70 2 19 0.0015 0.17 13.7 0.1 2 23 87 109 86 109 0.90 3 19 0.0053 0.58 12.0 0.6 1 23 114 137 114 137 0.94 4 19 1.9 2e+02 4.0 0.0 3 23 217 238 215 238 0.94 5 19 0.00088 0.097 14.4 2.6 1 23 298 320 298 320 0.98 6 19 0.56 62 5.6 0.0 2 23 348 370 347 370 0.92 7 19 0.016 1.8 10.5 0.1 2 23 391 413 390 413 0.96 8 19 4.9e-05 0.0055 18.4 0.5 1 23 418 441 418 441 0.97 9 19 0.16 18 7.3 1.8 1 23 446 469 446 469 0.95 10 19 6.4e-05 0.007 18.0 0.8 2 23 472 494 472 494 0.96 11 19 0.0048 0.53 12.1 1.9 1 23 575 598 575 598 0.96 12 19 2.1 2.3e+02 3.8 0.0 2 23 626 648 625 648 0.93 13 19 0.022 2.4 10.0 0.5 2 23 671 694 670 694 0.96 14 19 0.00011 0.012 17.3 0.2 3 23 701 722 700 722 0.94 15 19 0.0014 0.15 13.8 1.7 2 23 727 749 727 749 0.95 16 19 9.3e-05 0.01 17.5 1.5 1 23 754 777 754 777 0.97 17 19 1.3e-05 0.0015 20.2 6.3 1 23 781 804 781 804 0.97 18 19 0.0029 0.32 12.8 0.7 3 23 812 832 811 832 0.97 19 19 4.1e-06 0.00045 21.8 1.2 1 23 838 860 838 860 0.98
Sequence Information
- Coding Sequence
- ATGAATGAGCCGTCCGAAATCAGAGATCACACGCTAAAACACGGCAAATGCGGCCCACTTAAGACAGCGCAGGCAATATCAAAATTGCGCGCATCAGAAAAGTGTATCAAACTAGACGTGTCGAACCTGACTTGTAACATATGCAAGACCCACTTTCTGGCTCTAGATGATATTACAGACCACTTAATCCAAGATCACGAATTGAGGTACTCTAAAGGAGTGTTCATGTTTATGCAGCAATACAATTTATCCAAATTAAAGTGTCCGGAATGCTCGGAAATCTTCGTTTACTCGTCTTTTCTTATTAAACACGTGGATGAGACTCATCGACTGAAGAGTTTTCCATGCGACTTGTGCCACGGCGAGTTCTCGTCAGAGAATAATTTGGAAACGCATAAAAACGAAGATCACTGGGAGGAATATAGTAGCAATACGATAGTTAATCACATAAACATTATTGTAAACATGTCTAATGTAACACCGTTAAAAGGCTATCGCTCTAACCATACTTTTGGTTGCTACAGTTGTTCAGATTCGTTCACAGAATTTACGAGACTTCGGAACCACCACGCCTCTAAGCATAGTACATTTTCAATGCTACCGAGCTCCAAACCGGTTATTCTTATGTTGGATACCGCCCAACTTGCATGCCGGGAATGTCAAGAACCTCTTGAAGATATACAATCTTTGATAGAGCATTTGAAATTATTACACGAAACAGAAATTTCCGACAATGTATTAGCGCGCATCCAACAGTTTGAAATTGACAAATCTTATACATATGAAAATGCGCCGGCTCCTTACGGAGGGTGTGCCTCTGAGCGCCGCCGGAAAAACTTGAAAATACTATTCAACAACACCACGATCTTGCCTTTTAAGTGGAGGCGACGTTTTCAATGCTTCTACTGTCCCAAAAACTACGCAGAATACGATGAATTCAAAAAGCACACTAAATCCCATGGCTTGTGTAGCACAAAAGATTACGCTCTAAAAGTCATCAAAGGCGGTCACGTGGAAATCAAAATTGACGTTTCGGAAGTGACCTGCGAAATATGCAATGAACCTTTCGGTGGCTGGATTGAAATAGTTGAACATTTAATTATGAAACATAAAATGGAATATGACAAAACAGTAGACATGCCGCTGCAGGCTTACAGATTAATTGACATGAAGTGTTTATTGTGCGAGGAAAGATTCACTTATTTCGGATATTTGATCAGTCATGTGAACGTTGCCCATCCTCAGAACTGTTATATTTGCGACGATTGCGGTGTGACTTTTAATAAGAAACGGGACTTGGCTGTACATTTCAGGTCTTATCATCGCAAAGGTGGCTACCCTTGTGACCAATGTCCATTAGTATTTGATAATTTCTGTTCGCGGCGTACGCATCGGAATAACGTTCACTATAGAAAATGTTCAAATTGTAATCAAAAGTTTTCTACGCTGGGTTTGCTTAGAAAACATATTTTGGTCGAACACCCTACTGATGGCAGTTTAACGTGTGAGTACTGTGCCAAACTCTGCCAATCTCTCCAAGGCTTGCGTCTTCACAAGAGCAAGTGCCGGGTCAGAATGCTTTGCACTACCAATGATGCTATAGAAAGCACTACATCTATTCTCAACGAGCCGAAgaagaaacaaaatataaaacaaatcaGAGAAAACATACATTGCATCCTAAACATGTCTACGGCGATACCTTTTAAATTCTTCTCGAAATACTCCTGTTTTTACTGTTCAAAGAAATTTGTTGAATTCGATGATCTGAAATATCATACAGAATCGGAACATCCGAGCTGCGATTTGAAATCAAAATCGATGAAAAAATGTAGAGGAGAACgaattaatgttaaaataagtaTAGCTTCTTTGATATGTAAGGTTTGCGGTCATCCCATGGATAATCTAGATGTTTTAGTAGACCATTTAATTACAGAACACAAAGCGAATTACGACAAATCTGTAGTTGGTTGCTTAGAGCCCTTTAGAATCGTTAAAGATAATATACCGTGCCCACACTGCCCAGATCGAAGTTTTAGGTATTTCGGGATATTACAGCGGCATATGAATACGGAACATAGCAACAACAATAAAATCTGCGATTTCTGTGGTCGAGCATTCAAAAACGTTGCCAACCTAAAAGTGCACATATCGTACTCGCATTCCGGTAGTGCGGAGTGCAACTTTTGCGGTTTAATATTCAAGAATCAATGGTGTCTCGCAAGGCACCGTGCTAAGTCACACGATGCTAAAGATTATAAATGTTCCAAATGTCCAGAAATGTTTCGATCTCAGTACGATAAGCAGAAGCATTTGATAAGAGTGCACGATATTGGACATAAGTGTGAGCACTGCGGGAAGATGTTCACGAGGAATTCGTTTATGAAGGATCATATACGGCGGACGCATTTGAAGGAGAAGAATGTGGCGTGCACTCTTTGTAGCGAaaagttttttgataattacttattaaggATGCACATGGTAAAACACGAGGGTGAAAGGAAATTCGTTTGCAACATCTGTGGAAAAGCGTTTTTGAGGAGGAGCAATCTCCATTCGCACATGGAAATGCATAAGAAATATGGACATGCGGTTGGGTTATTGCAAGACATTATTTAA
- Protein Sequence
- MNEPSEIRDHTLKHGKCGPLKTAQAISKLRASEKCIKLDVSNLTCNICKTHFLALDDITDHLIQDHELRYSKGVFMFMQQYNLSKLKCPECSEIFVYSSFLIKHVDETHRLKSFPCDLCHGEFSSENNLETHKNEDHWEEYSSNTIVNHINIIVNMSNVTPLKGYRSNHTFGCYSCSDSFTEFTRLRNHHASKHSTFSMLPSSKPVILMLDTAQLACRECQEPLEDIQSLIEHLKLLHETEISDNVLARIQQFEIDKSYTYENAPAPYGGCASERRRKNLKILFNNTTILPFKWRRRFQCFYCPKNYAEYDEFKKHTKSHGLCSTKDYALKVIKGGHVEIKIDVSEVTCEICNEPFGGWIEIVEHLIMKHKMEYDKTVDMPLQAYRLIDMKCLLCEERFTYFGYLISHVNVAHPQNCYICDDCGVTFNKKRDLAVHFRSYHRKGGYPCDQCPLVFDNFCSRRTHRNNVHYRKCSNCNQKFSTLGLLRKHILVEHPTDGSLTCEYCAKLCQSLQGLRLHKSKCRVRMLCTTNDAIESTTSILNEPKKKQNIKQIRENIHCILNMSTAIPFKFFSKYSCFYCSKKFVEFDDLKYHTESEHPSCDLKSKSMKKCRGERINVKISIASLICKVCGHPMDNLDVLVDHLITEHKANYDKSVVGCLEPFRIVKDNIPCPHCPDRSFRYFGILQRHMNTEHSNNNKICDFCGRAFKNVANLKVHISYSHSGSAECNFCGLIFKNQWCLARHRAKSHDAKDYKCSKCPEMFRSQYDKQKHLIRVHDIGHKCEHCGKMFTRNSFMKDHIRRTHLKEKNVACTLCSEKFFDNYLLRMHMVKHEGERKFVCNICGKAFLRRSNLHSHMEMHKKYGHAVGLLQDII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -