Acro026159.1
Basic Information
- Insect
- Anania crocealis
- Gene Symbol
- -
- Assembly
- GCA_949315895.1
- Location
- OX438876.1:9579813-9581672[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 5.6e-06 0.00063 21.3 0.5 2 23 88 110 87 110 0.94 2 16 0.015 1.6 10.6 1.8 3 21 119 137 118 140 0.89 3 16 0.0051 0.56 12.0 3.7 2 23 147 169 146 169 0.92 4 16 6.7e-06 0.00075 21.1 1.2 2 23 177 199 176 199 0.96 5 16 8.1e-05 0.009 17.7 0.6 2 23 206 228 205 228 0.95 6 16 0.0015 0.17 13.7 0.1 1 23 235 258 235 258 0.94 7 16 6.7e-07 7.4e-05 24.2 0.4 2 23 264 286 263 286 0.96 8 16 1.3e-05 0.0014 20.2 0.9 2 23 302 324 301 324 0.95 9 16 6.8e-06 0.00076 21.1 2.3 3 23 333 354 331 354 0.96 10 16 2.7e-06 0.0003 22.3 0.8 2 23 360 382 360 382 0.97 11 16 0.069 7.7 8.5 4.5 2 23 390 412 389 412 0.93 12 16 1.9e-05 0.0021 19.6 3.0 1 23 418 440 418 440 0.97 13 16 6.4e-05 0.0071 18.0 2.1 1 23 445 468 445 468 0.98 14 16 0.016 1.8 10.4 0.2 2 21 490 509 489 510 0.92 15 16 0.024 2.6 9.9 0.0 3 21 531 549 530 550 0.93 16 16 0.032 3.5 9.5 0.2 2 20 574 591 573 593 0.92
Sequence Information
- Coding Sequence
- ATGGAGATGGCACCGGAACATGTTTATATCAAGCCTGAAATCAACGTTGAAGTGGATATTCAACCAGTCAATGAAGCTTCTGCCACAAATTTAGAAACAATATCCGTTAAATCAGAACCACTCGATGCTCCAGCTGAAATCAATATCGTAACTAACACACCTAATTACTATGAAAATGAATTGCAAAATTCATCTGTAGCACCAAAGAAAACGATAGAGATCGAAGGGAAAGTTTATGAGAACGGAAAGATCAACAGGCTACGATGCCCTCAATGTGATAATACATTTAAGAACAGAGCAAACCTCCGAGCTCACATCAAGTTTGTACATTCCACTGAAGACGATGTTGTGGACTGTAACATCTGTTTCAGAACATTCAAATCGTTACTACATCTCCGTTCCCACAACAGCGCTGTACATGGTGACCATAGAGTGGTTTCATGCGACTATTgcgataaaacatttttaaataaaaagaaactcaaCAATCACATATTCTACTGCCATCCGGAGACGGAGGAGGATGTCAAATGCGATGTTTGCTCCAAAGTTTTCAAAACCAAATACAGGTTGAAAGTTCATATGAAGCAAGTGCATCCGGAGGGCCAAACGGTCACTTGTAGTCAATGCTCgaaggaatttaaaaatagcaTGTTATTACAGCGACATGTTAAGTGGGCTCACCCCGCAGATGGTTTGATATACCGATGCCAAATATGCAACCGAGTGCTGCCATCTATTGACGGTTATAAGAGGCATATGGCAGCAGTGCACATACCCAAAACTGTCTCTTGTGACGTATGCAGCAAAGTATTCAAAACTAACGGTAGTTTAAACCGACACATGTCAACTGTTCATGGCAACGTAaaattagaaaagaaaacatataaaacagGCGATCTACAATGCAGCGATTGTGATAAGAAATTCACAACGAACACAGCGTTGTTGTGGCATTACGAAAAGTTTCATTCGGAGAATAAATTGGAAACCATCTGTAGGATATGTTCTAAAGAATTTTGCGATCAAAACAATTTGAAGAGGCATATGGAGACGGTGCATTCAGAACAGAGTGCAACGTGTGATATTTGCTTCAAAACTTATAAGTCTCCGATGAATTTACAGAGGCACATCAGGATAACCCACGCTCCCCCTGAAGCAGCCAAATCTTGTGATATATGTCAGAAAACATTCAAATGTTCAATGcatttgaaaatacataataatgttgTACATTCCAAGGAGGGCGAGTTTGCATGTAATATTTGTAACAAAGTTTATTCCtcaaaaaaatacatgaacAAACACAAGAAAACTCACAATAGTAAAGAATATCCGTGCACAATCTGTCACAAACTTTTCAAATCGACTAATGATGTCACAAGGCATATTAGAAGGGTACACATGAAGAATGGTGATAAAACTTATCAAGACGACTCGACTCAAGAAAATTCAAATGAAGAGACAAGCTGTCTTAAATGTGGTTTATCTTTCAACGATGATGTACAGCTACATTCTCATATAATTAGCTGTGGGCAGATGAAAAAGGAACCGATGGATCCAGatgaagaaaatttaaattcaaattactgtGCCAAATGTGGGCAAGtctttgatgatgatgtaaaaCTAAACTCGCATATTATTAGTTGTGGAGTAATTAAAATCGAACCCACAGATCTGGAGTATGTAACGCGAAAATCTGATTCTAATGAAATGCAGTGTGCCAAATGTGGACAGTCGTTTGACAATGTAGAATTACACTCTCACTTAATCAACTGTGGGACTGTTGCCGAAAAGATTATGATAAAGGTGGAACTTGATATTAGCGATGACAAAACCTTAAATAGCTCtttataa
- Protein Sequence
- MEMAPEHVYIKPEINVEVDIQPVNEASATNLETISVKSEPLDAPAEINIVTNTPNYYENELQNSSVAPKKTIEIEGKVYENGKINRLRCPQCDNTFKNRANLRAHIKFVHSTEDDVVDCNICFRTFKSLLHLRSHNSAVHGDHRVVSCDYCDKTFLNKKKLNNHIFYCHPETEEDVKCDVCSKVFKTKYRLKVHMKQVHPEGQTVTCSQCSKEFKNSMLLQRHVKWAHPADGLIYRCQICNRVLPSIDGYKRHMAAVHIPKTVSCDVCSKVFKTNGSLNRHMSTVHGNVKLEKKTYKTGDLQCSDCDKKFTTNTALLWHYEKFHSENKLETICRICSKEFCDQNNLKRHMETVHSEQSATCDICFKTYKSPMNLQRHIRITHAPPEAAKSCDICQKTFKCSMHLKIHNNVVHSKEGEFACNICNKVYSSKKYMNKHKKTHNSKEYPCTICHKLFKSTNDVTRHIRRVHMKNGDKTYQDDSTQENSNEETSCLKCGLSFNDDVQLHSHIISCGQMKKEPMDPDEENLNSNYCAKCGQVFDDDVKLNSHIISCGVIKIEPTDLEYVTRKSDSNEMQCAKCGQSFDNVELHSHLINCGTVAEKIMIKVELDISDDKTLNSSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -