Acro025127.1
Basic Information
- Insect
- Anania crocealis
- Gene Symbol
- -
- Assembly
- GCA_949315895.1
- Location
- OX438875.1:6819621-6824699[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.19 21 7.1 0.1 1 23 33 55 33 55 0.97 2 27 0.0043 0.48 12.3 0.1 3 23 87 108 85 108 0.95 3 27 0.012 1.3 10.8 0.8 2 23 131 153 131 153 0.96 4 27 0.0044 0.48 12.2 1.5 1 23 158 181 158 181 0.95 5 27 0.0095 1.1 11.2 0.9 1 23 186 209 186 209 0.93 6 27 0.034 3.8 9.4 0.2 2 23 215 237 214 237 0.93 7 27 0.00031 0.034 15.9 0.2 2 23 245 267 244 267 0.97 8 27 0.21 23 6.9 0.0 2 23 274 295 273 295 0.95 9 27 1e-07 1.1e-05 26.8 0.6 1 23 301 323 301 323 0.96 10 27 3e-05 0.0034 19.0 5.7 1 23 329 352 329 352 0.97 11 27 1.6 1.8e+02 4.2 3.4 1 23 406 429 406 429 0.86 12 27 0.0016 0.18 13.6 0.7 2 23 502 524 501 524 0.96 13 27 0.0013 0.15 13.9 1.8 1 23 529 552 529 553 0.95 14 27 0.018 2 10.3 2.4 1 23 555 578 555 578 0.96 15 27 0.011 1.2 11.0 2.8 1 23 584 607 584 607 0.94 16 27 0.0032 0.35 12.7 1.4 2 23 615 637 614 637 0.96 17 27 0.29 32 6.5 0.7 1 23 642 664 642 664 0.97 18 27 1.6e-06 0.00018 23.1 0.2 1 23 670 692 670 692 0.98 19 27 0.038 4.2 9.3 1.0 1 23 773 795 773 795 0.99 20 27 0.18 20 7.1 0.0 3 23 822 843 820 843 0.90 21 27 0.43 47 6.0 0.4 3 23 867 888 865 888 0.93 22 27 0.0026 0.29 12.9 0.9 3 23 896 917 895 917 0.98 23 27 7.5e-05 0.0083 17.8 1.8 3 23 924 945 923 945 0.97 24 27 0.31 34 6.4 2.5 1 23 951 974 951 974 0.94 25 27 0.002 0.23 13.3 1.9 2 23 981 1003 980 1003 0.95 26 27 0.0076 0.85 11.5 1.0 1 23 1009 1031 1009 1031 0.95 27 27 0.001 0.11 14.2 0.6 1 23 1037 1060 1037 1060 0.91
Sequence Information
- Coding Sequence
- ATGGAAATGGCGCGTAAACTGCTCGTTAAACGGAGAAATGTCGAGTACGTGTTACAATATGGGAATGTGACACCGTTCATGTGGTACAAAGGAAAATACCGGTGCTTTTACTGCGCTGAGCCAATGAGAGACCCTGTAGCTCTACGACAACACACCGCCTCGCATGAAACTCATAATCTAGAAAACGTGGTCCACTACAGAACGAAAAACAATAGAAACAAAGATGCAGCCGTCAAAATTGACGTCACAGATATCGCTTGTAAACTTTGCGACAGAAAAGTCACTAATCTAGAAGAGCTTATACATCATCTGATCATCGCGCATGATGCAGAGTACGACATGAGTGTTCCCAACTGTTTGTTAGCTTTCAAACTAGACAGGGAACAACCGACTTGCCCCACTTGTAATATGAAATTCGTGTTCTTCGAGTATCTCCTTCGACACGCAAATAAATATCACCTCTCGCATGATTATATTTGTGACGTTTGCGGCACTAGTTTCCAAGGGGAGAATCATTTGAAAATGCACAACAGATACTACCACAGGCAGGGAGGCTACACCTGTGATCACTGTGGTATCAATTTCGCTACTTTATCCAAGAAAATATTGCACGAAAAGAATGTCCATCAAGTGAATCTGTCCTCGTGCCCTTATTGTCCGGAGTTGTTTAAAAGTCCTTACTTTAAAAAGCTGCATATGGCCAACGTTCACGGCGTGGAAGAGTTAAAAATCAAATGCCCGTTCTGTCCAAAAGTCTTTCCGCAGGAGAGTATAATGTCGCGTCACATGAGGCGAGTGCATTTGAGAGAGAAGAATGTGGAATGCGAAGTGTGCGGTGACAAATTCTTTGGACCCTACGACGTGAAGTTACACATGGTAAAGCATAACGGGGAGAAAAAATTCGTGTGTTCAGAATGCGGAAAGAAGTTCTCGAAAAAAAGCAATCTGAACGCTCACATGGTCCTGCATACTGGAGAACGAAAGTATTCGTGCGAGGAATGCAATAAAACGTTTGCACACCACACGAACTATAAAGTGCATATGAGAAACCGTCACGATCTAACTAAACAGCTTATCAgcgaaaaatataaggaagGATTGAAACAGAAGATTAACCGCGAGAATCGTTTGCAACGCCTCTGTAAGGTGAGAAGCAATATACTCGCAGTCCTCCGATACGGCAACGTGGTTCCGTTCAAGTGGCACACCAAGGCGTTCAATTGCTTCTACTGTGTGAAGTCTTTCAAGGACTGTCTCACTGCCAAAGAGCACACCCTCGCTAAACACAGTTCGGTGGATCTCGACGCGTTTATACCAAAGATTGTGTCCAAAGACGTGCCAGTCAAAATAGATGTCACATTTATCGGTTGCAAATACTGTCCGGATGTTCTCATACGAACCATCGATGAGCTAATCGCTCACATTATTTCGGTACACGAAGAAGATTACGATTACACTGCCGGAGTTTGCTTGCTGCCGTTCGTGTTAGACAAGGACGTGATGTCGTGCGTAATATGCGAGAAGCAATTTGACAATTTCTCATCTATGATGACACATATGAATAAAGAGCACATAGCACATTCGCATATCTGCCAAATATGCGGTCTGAGCTTCATCAATATGATCAGATTGAACAGGCATATCAACAGCAGCCACCACGGATTCAGATGCACGTTTTGCAGCAAAGTTTTCGAGACTTACAACAAGATGGAGGTCCACAAGTCGCGATTGCACGGCCGTGTTAAAACTCATCACTGCAATTTATGCACGGCGTCCTTCGAGAGCAGCTATCAAATGAAAGTCCACATGGGCAAGGTTCATAACGTTGAGAAGTATAGAATCAAGTGCGAACACTGCCCCAAGATTTGCACGACAAAAGGTGCGATGGTTATTCACGTTAAGTCTCTGCATTCGGATTCGAGATTCGAATGTGACATGTGTGATTATAAGACTGCTATAAAATGGATGATCAAGCTTCATAAACGCAAACATTTCGGGGAAAGAAATTACGCGTGTAGTATATGCGAGAGGATGTTCGGTAGGTCTAGCAACCTCCGGGCGCATTTGAAAGTGCATACGGGGCAGATTGGGCGTGTTTGTCGATATTGTAGGCGAGGAGAACTTAGAGGTGGCCAGAAGGTTCCCAAAAAGCCAACAACGTCCCAAAAACGGTGTGAAGACGACATCTTCAGCAATGTCCAAGTGGCCGCTAAACCAACATTAACTGCTAAGGATAAACGGAAAATTATGCGACAGAACGTACTCCAAGTCCTAACGAAGTCAACTGTCATGCCATTTAGGTGGCTGAAGAGTTCCTACAGATGCTTCTACTGCTATGACATCTTCCAAGATGCGACAGATTTGAAAGGGCATCAGCAGACACATTTAGGTGACGAAATCAAAGAGCAAGCCATGAACAATTATTGGGAACCAGTGGTCTACGTTGACATATCGTATTTAGCATGCAAACTTTGTCCAGAAAACGTGACTGATCTCTACGATCTGATAGACCATTTGGTTCTCCAACACGGGGTAGTGTACAATAAAGATGTAGGAATATGCATGGTTGCGTTTAAGCTTGACAATTTCAATGTTAGTTGCCTAGCGTGTGGCGCGAGCTTTTACACATTTGGACCATTATTGCATCATACAAATAAAGACCATAAAGGCACATCAGCAATTCTTTGCGATGTCTGTGGACAGCATTTTAAAGATGTAAATCTGCTACGTGTCCATTTTAAGACTGTGCACGAAAACACCGGTCTCCTTTGCACGGAGTGTGGAGAGAAATTTGAAACGCGATCTAAGTTGAAGACTCACCAAAAGAACCAGCATGAGATGGACAAGAAATTCAAGTGTATGGTTTGTTCGTTGACCTTCCAAAGCCATTATAAAAGGTCCAGACACATGGCGGCCGAGCACAAGAATAGGCAGGAGATCAAATGCCTTCACTGTCCGAAGACGTTTGTCTTCAGAAGTATGATGATGACACACGTAAGGGACACCCATCTAAAGGTCAGGAATTATATGTGCAGCGTGTGTGGATGGAAGGCGTTTAATAGTAATAGATTGAAAAATCACATGTATAAACACAGCGGGGAAAAGAACTTCAAATGCGACGGATGTGATAAAGCATTTACGACGAAGAAGATTATGAGAGCGCATTATGTTCGCATACATAAGAACACTCAGCAGCCGCCGTTATATGATTCGATCAATCCTTATACTGGACAATAA
- Protein Sequence
- MEMARKLLVKRRNVEYVLQYGNVTPFMWYKGKYRCFYCAEPMRDPVALRQHTASHETHNLENVVHYRTKNNRNKDAAVKIDVTDIACKLCDRKVTNLEELIHHLIIAHDAEYDMSVPNCLLAFKLDREQPTCPTCNMKFVFFEYLLRHANKYHLSHDYICDVCGTSFQGENHLKMHNRYYHRQGGYTCDHCGINFATLSKKILHEKNVHQVNLSSCPYCPELFKSPYFKKLHMANVHGVEELKIKCPFCPKVFPQESIMSRHMRRVHLREKNVECEVCGDKFFGPYDVKLHMVKHNGEKKFVCSECGKKFSKKSNLNAHMVLHTGERKYSCEECNKTFAHHTNYKVHMRNRHDLTKQLISEKYKEGLKQKINRENRLQRLCKVRSNILAVLRYGNVVPFKWHTKAFNCFYCVKSFKDCLTAKEHTLAKHSSVDLDAFIPKIVSKDVPVKIDVTFIGCKYCPDVLIRTIDELIAHIISVHEEDYDYTAGVCLLPFVLDKDVMSCVICEKQFDNFSSMMTHMNKEHIAHSHICQICGLSFINMIRLNRHINSSHHGFRCTFCSKVFETYNKMEVHKSRLHGRVKTHHCNLCTASFESSYQMKVHMGKVHNVEKYRIKCEHCPKICTTKGAMVIHVKSLHSDSRFECDMCDYKTAIKWMIKLHKRKHFGERNYACSICERMFGRSSNLRAHLKVHTGQIGRVCRYCRRGELRGGQKVPKKPTTSQKRCEDDIFSNVQVAAKPTLTAKDKRKIMRQNVLQVLTKSTVMPFRWLKSSYRCFYCYDIFQDATDLKGHQQTHLGDEIKEQAMNNYWEPVVYVDISYLACKLCPENVTDLYDLIDHLVLQHGVVYNKDVGICMVAFKLDNFNVSCLACGASFYTFGPLLHHTNKDHKGTSAILCDVCGQHFKDVNLLRVHFKTVHENTGLLCTECGEKFETRSKLKTHQKNQHEMDKKFKCMVCSLTFQSHYKRSRHMAAEHKNRQEIKCLHCPKTFVFRSMMMTHVRDTHLKVRNYMCSVCGWKAFNSNRLKNHMYKHSGEKNFKCDGCDKAFTTKKIMRAHYVRIHKNTQQPPLYDSINPYTGQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -