Basic Information

Gene Symbol
rcor2
Assembly
GCA_949315895.1
Location
OX438864.1:3910880-3923942[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.4e-09 1e-05 26.8 0.0 3 46 132 175 130 175 0.96
2 2 5.5e-12 1.3e-08 36.1 0.0 3 46 399 442 397 442 0.97

Sequence Information

Coding Sequence
ATGGTTTTGGCCGAGAGAAGTAATGATGTTCGGAACGGGAAGCGGTCAAGGGGGCCAAGCCCCAATGGTCATGGAAGTCCAGATTCCAGTTCAGAAGACGAGAATGTAGTACCCTTTGCAGCCGAGAAGATAAGAGTGGGTAGGGACTACCAGGCAGTCTGTCCTGAATTGGAACCTGTAGAACAGAGGCGGCCTGAGTTGATATCAGACCGAGCCCTGCTTGTGTGGTCGCCAACTGCTGACATATCAGATAACAAATTGGATGAATACATAACAACCGCTAAAGAAAAATATGGTTACAATGGTGAACAGGCTCTTGGTATGTTGTTTTGGCACAAACATGATCTAAACCGAGCCTCCATGGACCTGGCAAATTTCACCCCTTTTCCTGATGAGTGGACCATTGAAGATAAGGTGCTGTTTGAACAAGCTTTTCAATTTCATGGGAAGAGCTTTCACAGAATAAGGCAAATGCTGCCCGATAAGTCAATAGCATCCTTAGTCAAATACTACTACTCATGGAAGAAGACACGAGCACGCACATCCTTGATGGATGTAGTGGGCGAGGGTCGCAATCCCGCCGGCTCTGGCACAGGCAAAACGGCCGGGTCAGAACCTGGCGGATCAGACAAGGAGTCTGACAACGATGAGAAGAAGTGGACTTACCATCGGGGTATAGTCCGCGGAGGGAAGCCGGAGCACGCGGGCGGGGCCTCGCTCCGAGCTACGGGGCAGTCGGCCGCGCAGGGCGAGGCGGGCGGCGAGGCGGGCAAGTGGTGCTCGCTGTGCGGCATACTCTGCTCGCAGACCACGGCGCACAACTCGCACAAGTTGTGCCAGGCATGCCTCGTGCACGCCAGACGCACCGGCACGATGCGCCCGCTGTGCGGCCCGTCCGGGCGGCGCGGGCCCGGCTCGAAGCAGCTCCGGTTCAAGCACCGGCTGCCGCGCGGCATTTACATCAACCACGACGACCTGGTCGCCATGGCCACCGGCCCGCAGCCCGGGGATGCGCCGCAGCCCGGCCTAGTCAATCAGGGCGAAGCGATGCTTAAAGCGATGGACAGGGAAATTATATCGCTCAAGAGACAAGTCCAGCAGAACAAGCAGCAGCTTAGCGCGATGAAGCGAAAGGTTGGCGATTCGGGGGTGGAAGATCTCAGGCCAGGGGAGCCCCCGGCTAAGATCAATTCGCGCTGGACAAACGACGAGCTACTCATGGCCGTTACAGCAGTCAGGAAATACGGCAAGGACTTCCAAGCGATCGCGGAGACGTTAGGCACGAAGACGGAGGCGCACGTGAGGTCGTTCTTCATCTCGTACCGACGCCGCTACAACCTGGACGCCGTGGTGCGGGAGCACGAGGCGGAGCGCCCGCAGCCGCATCATATACAGGGTACAACAAGCACAGAGTCGGCCGACAATGCTGCCGACAATACCTCCACCAATAACGGCACAGTATCGCCGCAGACCACCACTAAGGATGAAAAgACGGAGGTGGACAGCGAGGGAGTGCCCATCGGCGCGCCGGGCGAGCAGGGCGGGCCGCCCACCACGCCGCCCAAGCACAAGCCCGCCAAGTGCGAGCGCTGA
Protein Sequence
MVLAERSNDVRNGKRSRGPSPNGHGSPDSSSEDENVVPFAAEKIRVGRDYQAVCPELEPVEQRRPELISDRALLVWSPTADISDNKLDEYITTAKEKYGYNGEQALGMLFWHKHDLNRASMDLANFTPFPDEWTIEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRARTSLMDVVGEGRNPAGSGTGKTAGSEPGGSDKESDNDEKKWTYHRGIVRGGKPEHAGGASLRATGQSAAQGEAGGEAGKWCSLCGILCSQTTAHNSHKLCQACLVHARRTGTMRPLCGPSGRRGPGSKQLRFKHRLPRGIYINHDDLVAMATGPQPGDAPQPGLVNQGEAMLKAMDREIISLKRQVQQNKQQLSAMKRKVGDSGVEDLRPGEPPAKINSRWTNDELLMAVTAVRKYGKDFQAIAETLGTKTEAHVRSFFISYRRRYNLDAVVREHEAERPQPHHIQGTTSTESADNAADNTSTNNGTVSPQTTTKDEKTEVDSEGVPIGAPGEQGGPPTTPPKHKPAKCER

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00018116;
90% Identity
iTF_01280227;
80% Identity
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