Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_949315895.1
Location
OX438861.1:7610871-7613162[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.088 2.1e+02 3.4 0.0 22 33 225 236 221 240 0.88
2 5 1.2e-07 0.00029 22.2 0.3 4 45 259 302 256 303 0.93
3 5 1.1e-11 2.5e-08 35.2 0.5 3 46 311 358 309 358 0.95
4 5 9.5e-09 2.2e-05 25.7 0.0 1 44 362 405 362 407 0.96
5 5 1.1e-05 0.026 15.9 0.0 4 45 415 457 413 458 0.94

Sequence Information

Coding Sequence
atGGAAATCGACAGCGACGAAGACACAGAAACCCAAATTAAAGATTTGGAGCAGCTGACGGCTGTATTAGAAGACGAATCTATTGCCTCTTGTTCCGGATCAAGATGTTCTGCACCCGCTTCCAATGTTAGTTTAGTCGGCTCAGGCAAAGTAGAAGAATATACAAGAATAGAAACCGCGTTAGCCCTAAACAAGCTGACTGATATGAAGCTTCAAAAACTGGAACATACACTTACAAATCGTCTTCGCCAGTGCAGAGCAAAAGTTTCAGAGATCCAAGTTACTTACGCCACTGTAGAAAAATCTACGAGACCCGAAAAGTTCAAATATATTAACTGCGGTAAGCCATATTTCAAAGACGCTCACAATTTCCCAGCACCTGATAATAGTGATACAATTCTAATGAAAAAGTCAGGTATGTATGACTTTTCATGTGTAGCCTCTATACCAGGGTGGACTGTGAAAGATAAAAGTGAATTCATCTCTTCTGTCCTCAAAATTTCAAAAGATTTGAGGGTTAAGGAACTAAATTCTAAAATAGCTGAAATCCGCCGTAACACTAAAATACCTGAATCTAAAAAGGCTACCCTAATAGATGCAATTAAAGCAGAAATCCCAATAGTAAGCAAAAAGTCACTAAAAGAGGTTGCCTTGCCTATAGAGGAAGAATATGATTGGGATGCTATTGCCAACAAATTGAATAATCGTCATGGCCCACAAGAATATGCTTCATTGTGGAAATTGTTTTTGCatccaaatattaataaagaattttggaGTAAAAATGAACACATCTCTTTGCAGAGACTTGCACACAGTAACAGATTAACAGAATGGGATAAGATAGCAGAACTATTGAACACAAGGCGCACTGGTTATcagtgttttgtttattttcgaaCAAATATGAGTAACAGTCTAGCAGGCTCTAAATGGActaaagaggaagaagagtatcTTAAAAGACTTGTTGAATATTATCGGGAGGACAATTACATACCTTGGTCGAGAATTGCTGCATCTATGGAGAACCGAACAAAAATacagatttataataaatacctgAAGCTGCTTGAGCTTAGGAAAGGCCGGTTCTTAGCTGAAGAAGATGCTGTTATACTTACGAGTGTTGAAAAATTTGGGttcaatttaaagaaaataaaagaattcCTGCCTGGTCGTTCTCAAGCTCAGCTAAGATATCGATATCAAGTGTTACAAAAACAAAGAATATCTGCAGTATGGACAGTAGCAGAAGATAAAAAATTATTGCAGCTTATGGCCAATCAGGATTCAACAGCAAATTttgcaaatataacaaaattttttaataaagaccGTGTCAGTATTAGAGCCAGATAtctaacattgatgaaatgGATTCGACGGAATCCTAATGTAGACCTAATTTATGCCCCACGACGTGGAGCGCGGCGCTTGTGTCATGGTCAAGCCTCAACTAACTTGAACATAGCTATTGATAAACTCAAAAAAAGAATGCAATCAGAACTGGAGACAAAAAAACCTACTAGAATAACAAAAGAGTCTACAGAGGAAGAAATAGATGAGGCTATTATTGCTGCCCTTGCCACAATTCAAGTCAAGGAAGAAGAAGCAAGTACAGAACAGTCATCTGATATGTTAGTTATAGATAAAGACACTACAATATCTCATGTGGATCTGAATGcgacaaatttacaaaaagcccttatattattaaaagcggCTTTAGTTAAACAAGACTTTAAATGTAGTATTTACAGTGAAACATATCCTGAACTCTTAGTTCCTGAACAAGAAGTATGTTTAGTAAGAGTAAAGTCATACTCAAGAAAAAATGTAGCGAATACAATTAAACTTATTGCACCACCCACTATATGGGGTGAGAACACATTAAAGTTCACAGAATATGTATTTCCACCCCATTATGCAACAATAACTGGATGCAGAGCATTGTTATCTCATATTACAGCAAAAGAATTACCAAAAGTAGATTTGAGTGCGTTAAAAacgagaaatattttttaccgtgAGCAAATGATGCTTTTAATGGAACGTTTTAATACTTTGTTTTTGTGGCCTATGTTGCTGTCAAATGAAAATCCAGCAAAGAATCCAAAAACATATTGTAGGAATCAGTCAAAGCTTGGAGAAGTCCGTCCTCCACTAGCACCCTTACCCTCAACATCAATATCGAAAACACAAGAAACCAAACCTACAGAAGATAATAATGTATCCAATGTTAAGAAGAAAACACATACTAGCAGGAAAAGAGCaaaattgattgattaa
Protein Sequence
MEIDSDEDTETQIKDLEQLTAVLEDESIASCSGSRCSAPASNVSLVGSGKVEEYTRIETALALNKLTDMKLQKLEHTLTNRLRQCRAKVSEIQVTYATVEKSTRPEKFKYINCGKPYFKDAHNFPAPDNSDTILMKKSGMYDFSCVASIPGWTVKDKSEFISSVLKISKDLRVKELNSKIAEIRRNTKIPESKKATLIDAIKAEIPIVSKKSLKEVALPIEEEYDWDAIANKLNNRHGPQEYASLWKLFLHPNINKEFWSKNEHISLQRLAHSNRLTEWDKIAELLNTRRTGYQCFVYFRTNMSNSLAGSKWTKEEEEYLKRLVEYYREDNYIPWSRIAASMENRTKIQIYNKYLKLLELRKGRFLAEEDAVILTSVEKFGFNLKKIKEFLPGRSQAQLRYRYQVLQKQRISAVWTVAEDKKLLQLMANQDSTANFANITKFFNKDRVSIRARYLTLMKWIRRNPNVDLIYAPRRGARRLCHGQASTNLNIAIDKLKKRMQSELETKKPTRITKESTEEEIDEAIIAALATIQVKEEEASTEQSSDMLVIDKDTTISHVDLNATNLQKALILLKAALVKQDFKCSIYSETYPELLVPEQEVCLVRVKSYSRKNVANTIKLIAPPTIWGENTLKFTEYVFPPHYATITGCRALLSHITAKELPKVDLSALKTRNIFYREQMMLLMERFNTLFLWPMLLSNENPAKNPKTYCRNQSKLGEVRPPLAPLPSTSISKTQETKPTEDNNVSNVKKKTHTSRKRAKLID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00076482;
90% Identity
-
80% Identity
-