Acro020108.1
Basic Information
- Insect
- Anania crocealis
- Gene Symbol
- clz9
- Assembly
- GCA_949315895.1
- Location
- OX438870.1:8770551-8772029[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-07 6.6e-05 23.8 0.1 2 40 15 53 14 58 0.90
Sequence Information
- Coding Sequence
- ATGGGGCgctatgaaagaaaaaatgaaGGTCCTTTATGGTCCAGAGAGAGGTTGAATGAAGCAGTCGAAGCTGTTCGATCTGGTAGGATGTCTGGGTATGCAGCCGCATTAACCTTTGTTATACCCAGAAAGACTATTATGGACCACGTCACAGGTCGAAGGGGCCAAAAGTCATTAAGTCTAGGCAGAGCACCAGTATTCAAATATGAGACAGAACAAAGGATGGCACAATGTTTGCATATAATGGAAAAAAATGGTTTCGGTCTGACTCGCACAGAATTTCTACAGATTGTTAAGGAATATGTCACACAGAACGATCTAAAAAGACCTTTTAAGGATGCTACTCCCGGTAAAGATTGGTTTTCAAGCTTTAGAAAGCGTTataatttatcaattaaaaaaccGCAGGCTGTAGAGGTTGCGCGTAAAAAGGCCGCAGACCCATTCGTTATTCAAGAATTTTATGATATTCTAGAAAAAGTGATTGGCGAGTTAGGGCTTCAGGATAAGCCTAAAAGAATTTATAATTTGGATGAGACCAGTTACTGCAGCGATCCGCAAAAAACCAAAGTCATAGGTCTTAGGGGATTTCCATCAACTCGGACTACATCATCCTCCGGAAAGTCAAATACGACAGTCTTGATGGCGAGCAACGCTGCTGGGGAGAAAGGAGCtccattcataatttttaaaggaaAGCACGTATGGAGTAACTGGACCTCTGATTTAGCGTACCCTGGAACATTGTATACAGCTACAGCAAATGGCTGGATAGAATCGCAAGCTTTTTTGGATTATAttgataaaagttttattccgaTGATTGGCGATACGAGCCAGCCAACACTCCTCATCTATGATGGTCACAGTACTCATGTACAAATGGCTGTAATCGAAAAAGCCTTACAACACAACATAACGATCATAAAATTACCTCCCCATACCAGCCATATTCTGCAACCGCTGGACTTGGCGGTTTTCAAGCCTTTCAAAGATGCCTGGGACCAGGAAATGGTCAAGTGGCAAAGAACTCACAACGGACAAAAACTGCCCAAAGACGAGTTTTCGAGGATAGTTGGAAAAGTTTGGGAAGCCCTAAACCCCGACATTATAAAAAATGGATTTGCAAAAAGCGGGATTTACCCATTTAATAGGGATGCAGTTCCCGAACATAAATTAGACCCCGACGCTGTAAAAAGATGGAAAAAGATGTTGGCTAATAAACAAGCACCTCCTCAAAACACTCcgattaaattaactaaattatgccttatcaaaataaacttttcattgaATTTAAACGCAATTCCAATCCAAACTTCAACAAGCAACATAAACTCATTAACCACTAAAGAAATACCGTTTGAAGATTTATTTCTGGAAACTATAAAACAAGTTCCAACTACCGgtggcaaaaaaaaacaagtgaagATTTCTGGAAGCGCTGAAGTAATAACTCATGAGGATGTAATAGAATAG
- Protein Sequence
- MGRYERKNEGPLWSRERLNEAVEAVRSGRMSGYAAALTFVIPRKTIMDHVTGRRGQKSLSLGRAPVFKYETEQRMAQCLHIMEKNGFGLTRTEFLQIVKEYVTQNDLKRPFKDATPGKDWFSSFRKRYNLSIKKPQAVEVARKKAADPFVIQEFYDILEKVIGELGLQDKPKRIYNLDETSYCSDPQKTKVIGLRGFPSTRTTSSSGKSNTTVLMASNAAGEKGAPFIIFKGKHVWSNWTSDLAYPGTLYTATANGWIESQAFLDYIDKSFIPMIGDTSQPTLLIYDGHSTHVQMAVIEKALQHNITIIKLPPHTSHILQPLDLAVFKPFKDAWDQEMVKWQRTHNGQKLPKDEFSRIVGKVWEALNPDIIKNGFAKSGIYPFNRDAVPEHKLDPDAVKRWKKMLANKQAPPQNTPIKLTKLCLIKINFSLNLNAIPIQTSTSNINSLTTKEIPFEDLFLETIKQVPTTGGKKKQVKISGSAEVITHEDVIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00011936; iTF_00011937; iTF_00801763;
- 90% Identity
- -
- 80% Identity
- -