Acro034255.1
Basic Information
- Insect
- Anania crocealis
- Gene Symbol
- -
- Assembly
- GCA_949315895.1
- Location
- OX438882.1:6864165-6866744[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.4e-08 2.9e-05 25.0 0.1 3 40 11 49 9 54 0.83
Sequence Information
- Coding Sequence
- ATGGTGCGCAATTACAAACGCAAAAAAGTGgaaaatctaataaaagcaGTCGAATCTGTGCgtagtaaaaaattaattagttaCGCAGCTGCTGAAAAATATGGGGTGCCGAGATCAACAATCATACATCGCATCTATGGAACGAGAGGTGCCAAAATGCCAAAACCTGGCAGACCAAGTGTATTCTCTAAAGAAATGGAACGAAAAATTGCTGAATATATCCatattatggaaaaatgtgGTCTACCTCTAACGAAAAAAGAAGTCACGATCTTGATTGCCGAATACATTCGGCGCAATGGTGTAGTCACACCGTTCAAGAACGATGTTCCAGGAGACGACTGGTTTAGAGGGTTTCGAAAACGCAATAAGATTTCACTTAAAAAACCTCAATCAGTTGAGATTGCCCGGAGAAATGCTTGTAATCCTTTCACCGTTTACCATTACTTTGATCTGTTAGAACAAGCACAGCAAGAATTGGAATTGACTCACAAACCAAAAAACATATATAACCTGGACGAGACCAGCTTTTGTTGTGACCCGTCAAAAAGTAAAGTCATGGGGCAAAAAGGTTATCGCTCGACAAGAACAACCAGCTCACCTGGCAGAGACAACACAAGTGTTCTTTTGGCTGCAAATGCACTAGGCGAAAAAATTCCGGCCTTAATAGTGTTTCAAGGCacatatctttggaaccagtgGATGTACGAAAACGAGTCTGTAAAAACAGCATACGCTGTTAGCAAAAAAGGATGGATGGAGACGACGATCTTTGAGAAGTACATCAAAGACGTATTTATACCTGCTATCGGCTATGAAAGACCGGTTCTACTCATTTATGATGGACATTCTACTCATGTGGATCTCAATGTTATAGAACTCGCTGCTGCTGAAGGAATTACCATCCTTAAGTTACCAGCACACTCTTCCGATGTACTACAACCACTTGATTGTAGTACCATGAAACCCATGAAGGACCGTTGGGAAGAAGAGCTAGTTAAATGGCAAAGATTACACGTGGGGGCCAAATTACCTAAAAAAGGTTTTGCAAAAATACTTACGAACATCTGGGAGAATTTAAATCCGATAATAATACAAAATGGCTTCAGAAAAACAGGAATCTATCCAGTCGATCGGCACGCAATCAGTAAAGAAAAATTTGACTCCTTGTCTTGGTCCAAATGGGAAAAACATTGCCAGCAGACTGCAaagcaagaaaaaaaacaatctcaTCAAATAATACAGACCGATCAAAAAGAACTGCTTGTACAAGTTCCCAGGgttcaaaaagtaaaaagtctTCTGAGTTTAACCCTTGgagttttcaataaaaaaaccaGTGGAATCTTACAAAAAAACCACATGCCTATTGTTGGCAAGGATTGGGTGACTGTAAATGATCCTAAAACGTTCATCCTTAACAAACCATACAAAGAAAAAAGTCAGGAATTATTAGACTGCCAAGTATTTACACAAACTTCAACCAACCAGTCGACTAGAGTGCAAATACTAGACTGCAAAGTATTTCAACCTACCACAggagaaaatattcaaaatgtgGCCTACACCAATAACTCGACTATTCCTAAAAAAAATGGAGAAAAACTAACATTGACATCAAACAAAGAAAACGAACTTGTGTCCTTCGaagatatagttttaaaaactatagCCCGTAATGATCCGCCGAAAAACCCTAGAAAACGCATTAATAATGGTGCTGAGATACTAACATACAAAGATGTTATAACTCGtatgaaaatagaaaaaaacgaAAGAGAACAAGAAATGATAAGGAAACAATACAAGAAACTTAAAAAGTCGAAAAACAAATCACTacctaaaaaattgaaaaaaaaagaaacaaagaacatgagaactatcaaaaaaaagaaaagtaaggAAGAAACAGATAGTGACAGTACTTGTTCTTATACTTCGAGAAGTTCGGAAGAAAAAGAAGACATTGATACCTATCGTGAACAACTTTTGAAAGAAGAAGACTGTTTAGAAGATGAAGAAACGTTGTATACGATATCCATGGATAAAGAGCAAACGAAAGACCGAGAAAAAAACTACGTTCGAAAGCATTCTCAAGAAGTAAAAGACGTGGATACTTATCGTGAAGATGACGAAATATACTATAATATAGAAGATACGATTGCCaagaacaaaaaacaaaagacaaacaAGAAAACCATGCAAAAAATACCCAAGAGTACGAAAAAACAGAATAAGACGACAACCTCAGAACCGTCAACATCTAGAATGCAACAAGTGACATCCGTAGCCTCTCCCAAAGTAGGTGACTATATTTTGGCTACATTTAAATCGTCTAAGGGTAAAAAGAACTATAAATATGTATGCTTAGTGGACGATGTGGAGGGAGAAAAGTTTGTTGTCAAGGGACTAAAGTCACAGAAAAGTAAAAGAGTATTCAAAACGATCGAAAATGACATatcaataatagaaaaaaatgatttagtCATGTGCCTTCCATCACCTATCAAAATatcccaaataaataattcacaaatTGTGACCTTTCCTATTGACGTTGATGTTGTTGAATTTAAGTAA
- Protein Sequence
- MVRNYKRKKVENLIKAVESVRSKKLISYAAAEKYGVPRSTIIHRIYGTRGAKMPKPGRPSVFSKEMERKIAEYIHIMEKCGLPLTKKEVTILIAEYIRRNGVVTPFKNDVPGDDWFRGFRKRNKISLKKPQSVEIARRNACNPFTVYHYFDLLEQAQQELELTHKPKNIYNLDETSFCCDPSKSKVMGQKGYRSTRTTSSPGRDNTSVLLAANALGEKIPALIVFQGTYLWNQWMYENESVKTAYAVSKKGWMETTIFEKYIKDVFIPAIGYERPVLLIYDGHSTHVDLNVIELAAAEGITILKLPAHSSDVLQPLDCSTMKPMKDRWEEELVKWQRLHVGAKLPKKGFAKILTNIWENLNPIIIQNGFRKTGIYPVDRHAISKEKFDSLSWSKWEKHCQQTAKQEKKQSHQIIQTDQKELLVQVPRVQKVKSLLSLTLGVFNKKTSGILQKNHMPIVGKDWVTVNDPKTFILNKPYKEKSQELLDCQVFTQTSTNQSTRVQILDCKVFQPTTGENIQNVAYTNNSTIPKKNGEKLTLTSNKENELVSFEDIVLKTIARNDPPKNPRKRINNGAEILTYKDVITRMKIEKNEREQEMIRKQYKKLKKSKNKSLPKKLKKKETKNMRTIKKKKSKEETDSDSTCSYTSRSSEEKEDIDTYREQLLKEEDCLEDEETLYTISMDKEQTKDREKNYVRKHSQEVKDVDTYREDDEIYYNIEDTIAKNKKQKTNKKTMQKIPKSTKKQNKTTTSEPSTSRMQQVTSVASPKVGDYILATFKSSKGKKNYKYVCLVDDVEGEKFVVKGLKSQKSKRVFKTIENDISIIEKNDLVMCLPSPIKISQINNSQIVTFPIDVDVVEFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00074449; iTF_01091741;
- 90% Identity
- iTF_00074449;
- 80% Identity
- -