Acro006066.3
Basic Information
- Insect
- Anania crocealis
- Gene Symbol
- -
- Assembly
- GCA_949315895.1
- Location
- OX438860.1:1085459-1096439[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.5e-10 1e-07 32.8 0.0 4 39 177 213 174 217 0.90 2 5 1.1e-10 7.1e-08 33.3 0.3 2 39 229 266 228 269 0.92 3 5 2.7e-08 1.8e-05 25.7 0.1 2 30 284 312 283 319 0.94 4 5 2.3e-08 1.5e-05 25.9 0.0 20 45 350 376 349 376 0.94 5 5 3.7e-17 2.4e-14 54.0 0.0 1 39 383 422 383 427 0.93
Sequence Information
- Coding Sequence
- ATGCCAGGGCACGGCTTGTCTGAAGTGAAGTGTGAGCCGCAGTCAGACGAAGAGGAGAGCAACTCGCAGTACTCGCTCGGCTACTTGACCAATCAGCTACCCTTAAGGCACTGTCCGATTAAATTAGAAAATGGCATCCCACACGAAAATAATAGTTCTAGCCACATATTGCAAGATTTACAGACTGGTCTGGAGGAACTGGCACCACCAGCGCCGGCGGGCCCGGCCGCCACGCCGGTGTGCGTGAAGCAGGAGCCGCCGGACGCGCCGCCCGCGCTCACCCTCGAAAACCTGGAGCCCGCGCCCAATGCCAACTCTACGGGCTCAACATTGTTGGATAGACACATGGCAATGCTCAGCCACACCGAAGTACCTGACTCTTCGGACTTCATGCCGCTGATGGCCGTCAAAGACGAACCGATGTCTGAAGGAGAGCAACAGCAATTTATCGGCGAGGACTCCAGCGACTCTTGCAGCCAGTCGGAGCTCGCGCACCCCCGCTCGAGCCCCAAGAGCTGGACTCAGAGGGACATGGACAACGCCCTGGACGCCCTCAGGAATCGGAACATGAGTCTTACGAAGGCATCAGCAACGTATGGCATCCCGTCCACAACGCTATGGCAGCGGGCGCACCGCCTCGGCATCGATACGCCGAAGAAGGAGGGCGCTTCCAAGTCGTGGAGTGAGGCAGACCTAAGGGGAGCACTGCACGCCCTCAGGGCCGGGGCCATCTCTGCGAACAAAGCTAGCAAGGCGTACGGCATCCCCAGCAGCACGCTGTACAAGATCGCGCGGCGCGAGGGCATCCGTCTCGCGGCGCCCTTCAACGCCGCGCCCACGGCCTGGCGTCGCGCCGACCTGCAACGCGCGCTCGCCTCCATCCGATGCGGCGCCGCCAGCGTGCAGCGCGCCGCCTCGCAGTACGGCATCCCCACGGCATCCCCACGGGTGCGCACGCACGTTCCACACACACACTGCACAAACTACATGCGCCGCCTCACAGTACGGGATCCCCAAGGGTTCGCACGCACGCTCCACACACACACTACACGCGCCGCCTCGCAGTACGGGATCCCCACGGGCACATTATACGGACGGTGCAAACGAGAAGGTATTGAACTGTCTCGGTCTAACCCCACCCCGTGGTCGGAAGATGCGATGGGTGAAGCACTAGAAGCTGTCAGGGTGGGTCAAATGTCGATCAACCAGGCGGCCATCCACTACAACCTGCCCTACTCTTCGCTCTATGGCCGGTTCAAGAGATTTCATTCGGGAAATAAGTTTCAAACACAGAACTTGTCAACTCTACAGCAGCAGGAAGTCCAGAAGAACATCGAAATTGACCCTCAAAATCAGCCTCCAGAGATGTACTACCAGCAATCCTTGCAGGGCCACGCGGTCCATACTCCCGAAGAGAATACAATAGTACAAAACCAGTTCTACCATAACACCACCATGAACGAAGTACCAATGCACAGTAATGGTCTACATGACCAGTATTACGCCGGACCAGCCATGTATTACAGCCAGGGTTGCAATGGCATCGCGACCAGTTGA
- Protein Sequence
- MPGHGLSEVKCEPQSDEEESNSQYSLGYLTNQLPLRHCPIKLENGIPHENNSSSHILQDLQTGLEELAPPAPAGPAATPVCVKQEPPDAPPALTLENLEPAPNANSTGSTLLDRHMAMLSHTEVPDSSDFMPLMAVKDEPMSEGEQQQFIGEDSSDSCSQSELAHPRSSPKSWTQRDMDNALDALRNRNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLQRALASIRCGAASVQRAASQYGIPTASPRVRTHVPHTHCTNYMRRLTVRDPQGFARTLHTHTTRAASQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRFHSGNKFQTQNLSTLQQQEVQKNIEIDPQNQPPEMYYQQSLQGHAVHTPEENTIVQNQFYHNTTMNEVPMHSNGLHDQYYAGPAMYYSQGCNGIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -