Apse004439.1
Basic Information
- Insect
- Anagyrus pseudococci
- Gene Symbol
- -
- Assembly
- GCA_030522585.1
- Location
- JAPYYQ010000508.1:10856-19399[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0012 0.18 13.2 0.2 1 23 876 899 876 899 0.93 2 12 0.002 0.29 12.6 0.2 2 23 948 969 947 969 0.97 3 12 0.2 29 6.2 2.6 2 22 1100 1120 1099 1120 0.95 4 12 3.2 4.6e+02 2.5 0.4 3 23 1141 1161 1139 1161 0.95 5 12 0.042 6.1 8.4 0.4 1 21 1239 1259 1239 1260 0.92 6 12 1.5 2.2e+02 3.5 0.3 2 19 1288 1305 1287 1305 0.93 7 12 1.2 1.7e+02 3.8 0.3 1 23 1331 1354 1331 1354 0.96 8 12 0.00056 0.081 14.3 0.3 1 23 1406 1428 1406 1428 0.97 9 12 0.00019 0.027 15.8 0.4 3 23 1740 1760 1739 1760 0.99 10 12 0.25 36 6.0 0.1 1 23 2100 2123 2100 2123 0.97 11 12 0.016 2.3 9.7 0.1 1 23 2132 2157 2132 2157 0.96 12 12 3.5e-05 0.0051 18.1 0.3 1 23 2159 2181 2159 2181 0.97
Sequence Information
- Coding Sequence
- ATGGCATTGCCACAAGAAACACCaacaaatttgaatattaatgACAAGGATATGgatccaaaaaataaaaaacttgaaGAAGGTTTACGGAATCctaaaaagaagttttataatacaAATGAATCTGTTGAAAAAGTTTCTAATGTAATAACTTGTGCTAGGACAATGCCTTACTctggaaaaaacaaatacagcAAAAGAATACCTTTTCCAAGAGTATCTAGTGACATGAAGGAACCAAATACAAATGTAGACATTGTTAATACAAGTTTAATGCAAGAACCGATCCACAATATATCACATATTACTAATACTAACCAATTGATTGATGAATCAAAGCAGAGTACTAATGAGAATATTCAAACAAATTGTATTGATAATTCTactcatttaaatattactactgaaaatgatttagctACACAAAATGGAGAATGGAAATTTAGAAGAAAACGTCAAAAGACCTCATCAGACAGAGAAATTCAGcatgAAAATAaacctacaaaaaaattcaaaatcaatttgTCACTTTCATCTAAAGCTTTAAACAAATCACTTAGTGTTCCTTCTTCACCAGGTAGTACAATATGTTCACTACTTtcaataaaatgtacaaaGCATGCACATGACGATGATCATCAAAAATACAATGGAACATGTTTGGAATTACTGCAAAAGTTAAAACAAGCTAGTGTGGTGTTACATAAATTAGAGAATATGAAAGATTCGTTAGTTCTCCAGTACCTTGAAAAGACTGAAACAGACATTGTAAAAAATGACAAAGCAACTGTACAACCTAAAATTGTCCCGGTGAATCCTAACTTGAACAACAACGAATCAAAGGATTGtagtttaaataatcaagAATTACAGGATTCTAGCTTGAATAAACAAGAATCATTAAACTCAAGTTTGTATTTAAAACCTGCTAGTGTCAAATCAAGTGCTAGCCAGGAGCAGCTATTGAGTCAGGTTGATAAGAATACTCATGACGCAGTTACCAGTGACGATGATTCCTTTACAACAGGTCGTTCGTTGAGATCAGGGAAGCGCAGGACATCCTTAGAGTCGTCTATTAGCATCCGACCACTACGACGAAAGCGTGGTATTAACTATTTAGACAGTGACTCAGATTCTGACGCAACATCAATTTCGACGCGGCTAAGGACAACAAGATCCCGTATTCAGAGCGAATCGTCACCTCAGCGTGGTAAACGTTGCAGTTTTCcgaatttaaataacaatcaaGAGCAAGACGAGGAAGACACGGACATGGAGGTGGCCGAATTCTCGCGCATTGGTTCGCTACGCCGGCGTAACCAAAGTAGTATCAACGAAAGCGTAAACTCTAATGATTCCAACGACGATGAAGATAAGGAAGTCAAGAGAAACTATGTAACACGCTCGAGAAGTCGTGCAGCCGGATCAGTTTTGGATAATAGCACAACTACATTGGTCAGTAAAGAGAGTACTCGGCCGAAAACCGTATTAGAAAAACGAACtgtcaaaaaaacaaagatgCCCACAAGATCAAAAACTCCATCTCTTAgtctgaaaaataaagaagcatTAAATCCTCCTGATGAACCTAAAAGTAATGAATTAGAGAAAAGTGTGGAACAAACAACCGTTGAAGCTCCAAAAACTCCAGTTCCTGATCAACAACATAAATCCAATGACACAATAACCAGTGAACAGACCATGTCTGCAGATGAAGAGACTCCAATATCACAAGCCTCTACTATTGTAGTTAATCAGCCTGGCAGAACATCTAGAGCCTCTCTAATTGATGATAACTTGCTTGAGACTCCTAAAAAAGCATGCGACACTCCAAATCAAAGAGATTTGCCTAATAGCGACATATGCTTGGAGACACCGCTGAAGACTGCAAAACGTCCCAAAAGTAATTTGTTTGGTAAAATTCCCGAGCCTGAAATAGGTGAAGAAGGTCTACCCTCTACATCATCAGCTACGGAAGATATACCGTTGAGAAATCTTAAagTTCAGTTAATAAAGCTAGAAGCAATTTGTGCTGGATTCAAAGATCTCTCAGCTAGCGAAATAGAACTGTTGACTACCAAGTACATAGACCTTTTGATGAATTCAAATTTCACTTGTGACACTTGGCGAAGACCAATAAACTATCACAGACCACCTGTGAGCCTTGTAGAATTGGTTGACAATTCCGATTGCGTATCTGATCACGAAACACCGGATGACAGTGGACATGTTACATCTGATGAAGATCCTAAACACACTGAAAATGTTGAAAGAAACGCAGTcaacttaacgccaaggaagcaatcgttgaaaaaatcgGATCATCAACAAGGTTTATCTGCTCGTGTAGGCCAGTTATCAGAACAGCCTGGATTATCACCTAGTGGACAACGAAATGAATCGACATCACAATCTGCTTTGAGATCTGAGACTGACGTAGCTATTAATCAAACAGCATCACTGAACGATAATAATAGTACAAGTGTAACGACTAGTAAAAACGTCTCAGATTTGTCAACTAGCAAACAAAATGAGCAATCAACAAGTACAGATAATTGTGAAACAAGGGAACAAGCAGAACCGACCAACGAACCCGAGACGCTTACGGTCAACGGTTTGAACATGTTTAAATGTGAATGGTgcgaaaaaatattcattaataaaGATTTTCTCTCTGTACACGTCGAAGAGTCTCATCCTAATGCCACCAAAGAAGGGACAGAGGTTTCTGCCACTTCTGATTCATCCAAGAGTAGTGCGAAACAAGAACCTATTGGTTCGAAGAAGCCCTGtccaaaaagcaaaaagaaaatcaaaccACGAAACACCGTCCAGAGCCTACAGTGTTCGGTATGCTCGCAAATTTTTGCAACTACAGAGGAGTTATGGTCACACTTGAAACAGCATAACGAGCACGAGTTGCAATCAGCTTACAAAAAGTTAGCCGCAAAATTGAATACTAGCGATACTGCATTGTTGGATCAAGATCAGTCTCAGAAAACTTCGAACAATGACGAAACTAAAACaggcaagaaaaaaagaaagagcgttGAAAACGTTGCGTGTAGCAGCAGGTCATCAGTTGAAGTTGAAGAGATAGTAGAAGATAGTACTACGGCACAAACATTGCACAAAGAACAACAGGTAACACATCAAACAAATGTCGAGAACTACTTGACGACCGGAGCAGTACCAATAGTTAACAGCACAACCAACGAACAACCTACTCCATTAATGATGTGTTATTGTCATGCACACGAAACCGCTGGCCAGGATTTGCAAATCGAAATGGTCTTGCAGTGCAAATCTTGCAACGTGATATACAGGCGGCGCGAGTGCTTCGAGACGCATTACCGTACAAATTCGGAATGCCGCCAACGGCGTCAGAATAACGAAATGACAAAGGTTCCTAAACTTTTCTGTAGTGGATGCCCATGTGTACTGGACTCACTCTTGGATATGCGCAGCCATCTCGAAATGCACGCCTTGAAAAACAGTCAGGGTTCGGTTACGTTTGTCTGCAATATCTGCAAGGTTGCGTTCTTTGGCGTGGGCAGCATATTCTACTCGCACTGGTTCAATCACACCAAAACAGCCAACTTTGTCGCGAGTAAATACTCGTTCCCCAAACTGTCGGTGGTATCGGTGCTCGAGGACTCTAATATCTCAATGACTCAAAGTAAGAGTCAGGAAGGATTTTTCTACATTGCTGAGCACGTATGTCGACAGTGCAgGTTACCTTTCAGTTCTGAGCCTGAACTTCAGAAGCATAAGGAAACTCCTTGTCAACCCCCGCAGCCAAAACCTCAATCTCGAGTGCAAGAAATTGGTGACAATATTCGTACTCAAATGATCAAGCTGATATGCGATTTATGCAAAAAGTACTACGTAAATAAGGAAGGCTTTGATAAACATTGTGTTGAGCGCAACCATCTTAAGACGCCTCTCATGAAATTTTCACGATTGCCCGTCAACAACAATGAACAAACGTATGTGTGTAGTTTgtgtagaaaattaaataaaactttagaAGATTTAATGGAGCACTGGAAACGAGTGCACAGTCCGATCATGGAACTTTACACTTGTAAGACTTGCAATGTCGTGCCATCGAATGATGTGGCCAATTACACGTACGAAAAGTTTGAACTTCACTGCCGAGCAGCTCACAAGAGTGAAGTCATCACGTGCCTTGTGTACTTTGTTACCGCGAGATACGTTTGCAATCTATGCAAGTACGCTTTTGAGTCTGAGAAATCTCTCAGGGAACATCAAGTGGTGCATCAGAAAAAGCCACAAGCTCCACTGCCTGGAAGCGAGTCTCAAACAGTACCGCTTTGGGTGACTGATAACGTTGTTTCCGAGGATGGTAGACAAATACCGGTATCCGGATATGTGCAGTACCAAGTTAACATAGCACCTAAGAatgTGACATCTACAACGCAAGCTGCATATCATCAGCAACAACAGCCAATATTCACACCAAGCATGAATGCAGAAATGAGTAGCAATCCAGGCTACTTTACAGGGCCTCACAGTTCAAATATGGTTCAGACACCTAGTCCCAATACACCAAATAATCTTTTACGTAACTTATTAGCGTCGAACGCTTTTGCTGAAATGCCACAAACTCCACAGCCACCGGCCGTGCCTCAAGCCAGTCCAAACATCGAGACTATTTTCCTTGACTCAAGATCAAATAGTCCTGTGACGGATATTCCAGCTTCCGCTCCAACGTACAGTACCGCTATCGCAAGTAGCGGTCAAAATGCTGCATCAGATTCTAGTACCTCCAATACTTCACAAAAGTCCTATATGACGATGGTTAATCCAGACTTCGAAACAATGCTCGGATCGAATGGCAACAAAACATCTAGCTCCGTCAGGTCGCCAGCTCAACAAGATAAAGAGGCGCTAAATGCCGTTGGCGATAATGACACCGACATGATGACGCCGCAGCCATTTGAAATTGTTCTCGTAACCGATGAACTGGGCAATGAAAACTCCAGCGAAGAAATTGCAGGGTCTAACAAAACGACAGTACCGCATAAATCTGGGATGACGGACAACGGCATTTTCGGTCAATACGGTCCAACTTCTGGATTGGAGATGTCAAACGATTCGAGCTCGTCGTCAACAGCATCGACGTCGGCTGCAACAAAATCGTTCTTGCGCGTACGTTCGATAGCCGAGCTTcagcaaataaaaattctgCTTTGCTCCGAGTGTGGTTTGAGTTTTAATACCACTTACGCATTGGCAGACCATAAGCGTACGCACGACATAGCACGAGTGGAAAAGGAACTGGCAAATGTTGAAGTTGGACGTGAGACGCCTGTTCAAAAGATATCACCGATGCCTATGCAGTCAGAGCCTGTTAATACTAACTCGACAACTCAGCACGTTTCGATGAGACACAAAATGCCTGTTCTCACTTCAAATGGACAATCTACGCTAAACgatatgaACGCAAGAGCACGTCCATCGACCATTAACAGCCAATCTCAACCTCAAAtccaacagcagcaacaacaggtTCCTAATTATTGGTTTGCCTCCTGCAATGGCTCGAATAATGTAGCGCCGCCCAACGTAACTTATAATACTTACAATACAAATCGACAGAATCCAAGCATTTTACGGCGTCAAGCTGCTGCAAATGCTGCAGCTAATAATTACACTTCAGTTCGAGGTCCACCTCCCTCTTATTCTGCAGCAACTCAGAGCGCAATGTCATCTAGTCGTACCGCCGCTATACATTTACCTGAACGAAATGCTACTAACAGCAATACTCCTGCAACAAAAAGGCCTTCCGGTGCTGCCACACGAATACCACAATTGAGTTTACCCCATTTCGATACTCTCGCAGAACATCGTCCAATGgGTGGACATGTCTCGTACAATACGTCCGAAGATTCTAGAGAAGACAGTGCATCTATAAACACCCAACACTTAAGTACAATTCCAAGATCAACGCTCCAGTTTCAAGGAAAGACATACAATCGAGTTAATACCGATCCAAATTATGGTGATAACTATAATCACAACGTGAATTACAATTCACACCTTAATCAAGCACCACAACATCAGAAAGTGATGTATTCCTGCAAATACCCACCTTGCACCTTCCAATCGGATAATCCCCGCGTTATCCGAACACACGAGAAGATTCACGTCGAGCAGTCccaacaacagcaacagcaacaacgTGTCCAGGTGAAACATGTTTCAGTCAGCCAAATGCCCGAGCGTCAGCGACACGCGGTGCCTAGCAGTCGCGCTACCACAGACAAACGCTACTCCTGTCGATTGTGCCATATGATTTTGAACTCTCCCGCCGATGTCACGGAGCATTTAGCAACGGTTCACGCTCCCTCATCGCAGGTCTGCTGCTATGTCTGTGATTATTGTAAAACGCCGCTTATCTTTAAAACGGAGGCCCTGCTACGCGAGCATATGAATATTGCTCACAACTTTTCGTGTGAAATCTGCAAAAAGCGCTACCCGTCTAAAGAGGACTTGATGTTGCACATGGATGTACACACCCGTCATCCTTGTTGA
- Protein Sequence
- MALPQETPTNLNINDKDMDPKNKKLEEGLRNPKKKFYNTNESVEKVSNVITCARTMPYSGKNKYSKRIPFPRVSSDMKEPNTNVDIVNTSLMQEPIHNISHITNTNQLIDESKQSTNENIQTNCIDNSTHLNITTENDLATQNGEWKFRRKRQKTSSDREIQHENKPTKKFKINLSLSSKALNKSLSVPSSPGSTICSLLSIKCTKHAHDDDHQKYNGTCLELLQKLKQASVVLHKLENMKDSLVLQYLEKTETDIVKNDKATVQPKIVPVNPNLNNNESKDCSLNNQELQDSSLNKQESLNSSLYLKPASVKSSASQEQLLSQVDKNTHDAVTSDDDSFTTGRSLRSGKRRTSLESSISIRPLRRKRGINYLDSDSDSDATSISTRLRTTRSRIQSESSPQRGKRCSFPNLNNNQEQDEEDTDMEVAEFSRIGSLRRRNQSSINESVNSNDSNDDEDKEVKRNYVTRSRSRAAGSVLDNSTTTLVSKESTRPKTVLEKRTVKKTKMPTRSKTPSLSLKNKEALNPPDEPKSNELEKSVEQTTVEAPKTPVPDQQHKSNDTITSEQTMSADEETPISQASTIVVNQPGRTSRASLIDDNLLETPKKACDTPNQRDLPNSDICLETPLKTAKRPKSNLFGKIPEPEIGEEGLPSTSSATEDIPLRNLKVQLIKLEAICAGFKDLSASEIELLTTKYIDLLMNSNFTCDTWRRPINYHRPPVSLVELVDNSDCVSDHETPDDSGHVTSDEDPKHTENVERNAVNLTPRKQSLKKSDHQQGLSARVGQLSEQPGLSPSGQRNESTSQSALRSETDVAINQTASLNDNNSTSVTTSKNVSDLSTSKQNEQSTSTDNCETREQAEPTNEPETLTVNGLNMFKCEWCEKIFINKDFLSVHVEESHPNATKEGTEVSATSDSSKSSAKQEPIGSKKPCPKSKKKIKPRNTVQSLQCSVCSQIFATTEELWSHLKQHNEHELQSAYKKLAAKLNTSDTALLDQDQSQKTSNNDETKTGKKKRKSVENVACSSRSSVEVEEIVEDSTTAQTLHKEQQVTHQTNVENYLTTGAVPIVNSTTNEQPTPLMMCYCHAHETAGQDLQIEMVLQCKSCNVIYRRRECFETHYRTNSECRQRRQNNEMTKVPKLFCSGCPCVLDSLLDMRSHLEMHALKNSQGSVTFVCNICKVAFFGVGSIFYSHWFNHTKTANFVASKYSFPKLSVVSVLEDSNISMTQSKSQEGFFYIAEHVCRQCRLPFSSEPELQKHKETPCQPPQPKPQSRVQEIGDNIRTQMIKLICDLCKKYYVNKEGFDKHCVERNHLKTPLMKFSRLPVNNNEQTYVCSLCRKLNKTLEDLMEHWKRVHSPIMELYTCKTCNVVPSNDVANYTYEKFELHCRAAHKSEVITCLVYFVTARYVCNLCKYAFESEKSLREHQVVHQKKPQAPLPGSESQTVPLWVTDNVVSEDGRQIPVSGYVQYQVNIAPKNVTSTTQAAYHQQQQPIFTPSMNAEMSSNPGYFTGPHSSNMVQTPSPNTPNNLLRNLLASNAFAEMPQTPQPPAVPQASPNIETIFLDSRSNSPVTDIPASAPTYSTAIASSGQNAASDSSTSNTSQKSYMTMVNPDFETMLGSNGNKTSSSVRSPAQQDKEALNAVGDNDTDMMTPQPFEIVLVTDELGNENSSEEIAGSNKTTVPHKSGMTDNGIFGQYGPTSGLEMSNDSSSSSTASTSAATKSFLRVRSIAELQQIKILLCSECGLSFNTTYALADHKRTHDIARVEKELANVEVGRETPVQKISPMPMQSEPVNTNSTTQHVSMRHKMPVLTSNGQSTLNDMNARARPSTINSQSQPQIQQQQQQVPNYWFASCNGSNNVAPPNVTYNTYNTNRQNPSILRRQAAANAAANNYTSVRGPPPSYSAATQSAMSSSRTAAIHLPERNATNSNTPATKRPSGAATRIPQLSLPHFDTLAEHRPMGGHVSYNTSEDSREDSASINTQHLSTIPRSTLQFQGKTYNRVNTDPNYGDNYNHNVNYNSHLNQAPQHQKVMYSCKYPPCTFQSDNPRVIRTHEKIHVEQSQQQQQQQRVQVKHVSVSQMPERQRHAVPSSRATTDKRYSCRLCHMILNSPADVTEHLATVHAPSSQVCCYVCDYCKTPLIFKTEALLREHMNIAHNFSCEICKKRYPSKEDLMLHMDVHTRHPC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -