Basic Information

Insect: Anagyrus pseudococci
Gene Symbol: gtf3a
Assembly: GCA_030522585.1
Location: JAPYYQ010001482.1:10909-14758[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.51 74 5.0 0.7 1 23 584 606 584 606 0.85

2 15 0.008 1.1 10.7 1.9 3 23 669 690 668 690 0.97

3 15 0.0017 0.24 12.8 1.5 1 23 697 720 697 720 0.97

4 15 0.00038 0.055 14.8 1.2 1 23 726 749 726 749 0.94

5 15 0.31 44 5.7 2.5 2 23 757 777 756 777 0.95

6 15 6.3e-06 0.00091 20.4 2.4 3 23 784 804 782 804 0.97

7 15 1.2e-05 0.0017 19.6 0.3 1 23 810 832 810 832 0.99

8 15 0.036 5.2 8.6 2.2 2 23 844 866 843 866 0.95

9 15 0.043 6.3 8.4 2.0 1 23 872 895 872 895 0.94

10 15 0.018 2.7 9.5 1.9 3 23 918 939 917 939 0.94

11 15 0.00012 0.017 16.4 0.9 2 23 946 968 945 968 0.96

12 15 1.2e-05 0.0018 19.5 1.3 1 23 975 997 975 997 0.98

13 15 0.019 2.7 9.5 2.9 1 23 1003 1026 1003 1026 0.95

14 15 5.4 7.8e+02 1.8 6.3 2 23 1033 1054 1032 1054 0.96

15 15 0.0036 0.51 11.8 2.3 1 23 1060 1082 1060 1082 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.51	74	5.0	0.7	1	23	584	606	584	606	0.85
2	15	0.008	1.1	10.7	1.9	3	23	669	690	668	690	0.97
3	15	0.0017	0.24	12.8	1.5	1	23	697	720	697	720	0.97
4	15	0.00038	0.055	14.8	1.2	1	23	726	749	726	749	0.94
5	15	0.31	44	5.7	2.5	2	23	757	777	756	777	0.95
6	15	6.3e-06	0.00091	20.4	2.4	3	23	784	804	782	804	0.97
7	15	1.2e-05	0.0017	19.6	0.3	1	23	810	832	810	832	0.99
8	15	0.036	5.2	8.6	2.2	2	23	844	866	843	866	0.95
9	15	0.043	6.3	8.4	2.0	1	23	872	895	872	895	0.94
10	15	0.018	2.7	9.5	1.9	3	23	918	939	917	939	0.94
11	15	0.00012	0.017	16.4	0.9	2	23	946	968	945	968	0.96
12	15	1.2e-05	0.0018	19.5	1.3	1	23	975	997	975	997	0.98
13	15	0.019	2.7	9.5	2.9	1	23	1003	1026	1003	1026	0.95
14	15	5.4	7.8e+02	1.8	6.3	2	23	1033	1054	1032	1054	0.96
15	15	0.0036	0.51	11.8	2.3	1	23	1060	1082	1060	1082	0.98

Sequence Information

Coding Sequence: ATGgagaatattacaaatttgaaCATTAAGAGCAATATAATATACTCTAAAGTATCAAATgcaggaaaagaaaagtacattggtttaaaaataaccaatctaaatgaattaaaaagagcaactCCACGTCTTAAATTACCAtctatattatcaccaacaaTCAAGAAAAATCAAGCAGTGCCtaaagaaattaaacaaaagttgcaaaaatattGTCGTACTTGTGCAGGATTGAAAGTTCcattaattgatatttttagtGATAAAGGTAATCAAATGAGATTGTTTCAACAAATTCAACATTTGGAAGATATTGATAAGGATGATAGTTTGTCAACTCAAATGTGTATGGATTGTATTTATGATATGAAAATAAGCtacaaatttttcatgcaaattaaaaaagctgaaatgaaattaaaattaatttgtgattCGTATAGTAGTGTATTATCTAAACCAGCATCTGTGGATATTGAAAATGAGACTGatgataaaactaaaaaatgctTACCATTAGTTTTAGATAAATTAGTAAGcaaagaaaatgaaacaaatttcAATGACAAAGGAGGTAACTGTGAAGCTAGTGATACAGAATACAGTGAGACAAATGAAACTTATGATCAGGAAATACAAAATTCTTTCGAAGAATTTGAGGCTCCTGATAGTTCTCAAGATTgtcaagaagaaaaagttgataatactgaacttgaaaaaacaataaaagaagaagTTAATCAACTAGAACTTTCAAGCAATGCTAAAAATACAGCGTATAAGTATGATGAGTCAATAAATGCTTATATCAAAATTGAAGTTGATAAAGAAAGTACACCAAATGCTGAGCCACAAAGCAGTACAGTAAAAAGTGTACCTAAAGATGAAACTACTACTATTGTACATTCTAAAACAcctaatatattaaaaagaaagcttTCAAGTGGAAATATAAGTGATGACAGTGCagaaaaaattagtaaaaaagatcttcaaaaattgaatcttgatttaaaagtaaaaattccaaaactTAATTTACAAGATAGTGTTAGTGTAAAATCTGAAGAAGATGGTGTAATGTATGTTACTGCCAAAGGTTCAAATCCCAATGAAatgcttttaattaaagtaaGAAAAGTAGATAaatctttagaaaaaaaatctgacaAAGTACATGGGAAAAAGAAGTCTGATGCAGCTGCAGCACTCAAACCATTTCTGAAGTTCGACAATCGCGATCAAACAGATATTGATAAACAAATTGagcagtataaaaaaaagagggttCAAGTATTAGGAGACATAGCTAATCTTACAGATGAAGAGATAAAGGGAGCTTCAGAAATTAGGACATTagagaaaaatgaattaaagGTCAATGACATTGAGATGAAAGAAGCTGCAAAGATCAAAGACAATTCCAATTCTTCGGAAACCATAATTGAAACGATTTCACCAAAAAATATACAACTGTCAGAAAAAACTAAGCTAAAATTGATGGATAACAAACTGAAATACACCGAACTAACCAAGGAAGCGCAAGAGGACTGTATCGAAAGATTAAAATCCGTTCTGAAACAGAAAGACGAGTATATCACCGAGTTCATGAGCTACCTAAAGCAGCGTAAAATTACGGTGACGCGCCTACGAAATGAAGACTTGATATCTTTGTACGAGACGAAGAACAATGTCGTGATAGATCGAGATGACGACGAGTTTGCAGAAAGTATGAATCCCCGAGAGAAATACGACTGCGACTTTTGCTTCCGTACGTTCGCGTCGCAGGAGCTTGAGAACGAGCATTCGAAAATTCACGAGTTTCGTATAATGCACTTCTGCGAGGACTGCAAGCAGGAGTTTTTGACGCACAAGGCCAAGCGCGCGCACAACAATGCGTGCGCGGAAAAGATTATATGCAAGTACTGCAAGAAGATATTGGACTCGAAAGGCAAAAAGCGCCAGTGCGAGCAGAAGCACAGCGACGAGCAGCACGGCCAGCTCTGCGACCGCTGCGGCGAGAAGTTCAAGCACCTCGGCACCCTCGATCAGCACGTCAAGTCGAAGCACATGCACCTCGAGAAAATATTCAAGTGCCCGCAGTGTCCAAAGCGCTTCGCCTTGCGCACCAAGCTGACCTTCCATCTGAAAACCGTTCACACGAATTGCCGGGCCTTCCTCTGCGAGGACTGCGGCTCGGACTTCAAGAACCCAGCGAGTCTGCGGCATCACCGCATACGCAAGCACCAGACCGCCAACAGCCGGAAGGAGTGCCCGGAGTGCCACAAGTCCGTCCCGGTCTACAGCATGTCCAAGCACATGCACACCCACAAGGCTTACAGCATAGCCTGCGCTCACTGCGACAAGAAGTTCAAGAACACCTCGACGCTGAAGCAGCACCTGCGCATCCACGAGGACCAGCGCCAGTACAAGTGCGACACCTGCGGCGTCGGCTTCAATCGTCGCGACGGGCTGAGGCTGCACCTCAAGGTCCACGAGAAGCCGGACAGCCGGGGCCTCAAGGAGTGCGCCTGCCAGGTCTGCGGGGACAAGTTCCCGAACCACTCGATGCTCGTGATCCATCGGAACCGCACGCACAAAGACGGGCGCAACTACACCTGCCACATCTGCAACCGATCCATGATGAcgacgcgctcgctcgagtgGCACCTCGCCCACATCCACAACGAGACGCTCCCCGGGATTCTCAAGGAGTGCTCGAGCATCGACGCCGAAACGAAGCGAGTCGCGTGCGTCCACTGCGACAAGACCTTCAAGACGGAAATGATCCTGCGCAATCACGTGAAGAACACGCACGTCGAGAAGGAGCCGATGAAGTGCCTCGACTGCGACGAGGTCTTCACCTCGGAGGTGCGGCTCAAGCACCACATGATGGTCCAGCACGGCCGGCTCGAGGGCACCTTCCCCTGCCCCCATTGCCCGAAGCGATTCGTCAACCAGCTACGCCTCAAGACCCACATGATTTCGCACTCGGACGAGCGGCCCCACACCTGCGACGTTTGCAACTTCATGCTCAAGACCAAAATACAACTGATCAAGCACAAGCAGAACCGTCACAGCAACGAACGCCCGCTGCAGTGCCGCTACTGCGAGCACACCTGTAAGCAAGTCAGTGCTCTTGTCTGTCACGAGCGGACCCACACGAACGAGCGACCCTACAGCTGCAGCGTATGCCAGCAACGATTCAAATACCTCGGCGACAAGAACAAGCACGAGCGACGGCACGAGAGTCTTGGAGGGACCGGATTCAAGCGCATTGTCACTGGTAGGAATACCAACAAGGGTGGCAAAAAGAAGTCGAGAGAAGCCACCGAGCAAGATCAAGATCAGGAGCACGAACTCGAGCAGGGCGATGAGGAGTGCGCGGCACAAACCGAAATAATCGAGGGCTTCCAAGAAGGAGCTTTGATTAAGCTGAAAGACGGACAAGTTATCACCGGAACTTCCAATGCCGCCTTTGAACAGATTGTTATGGAAGATCCGACACAAGGTACGAGTAATACCGAGATCATCGTTGGCGTAGAAGAGGGAACTGTTTATACGGAAGAAGTTACGTCGGACCACATTGAACCACAAATTATCATTCCCGAGATAATAGACGAAAGTGTTTTGCAACCGGGAACAGTGATTCAAATACAACAACAGGACGAAACgggtgaaattaaaattgtaccGTTTATGTTGTCCATGTCAGATCTAACCGATGTCAAcaccgaaataaatttaacaacggCTTCTATAACGTACAATAACTAG
Protein Sequence: MENITNLNIKSNIIYSKVSNAGKEKYIGLKITNLNELKRATPRLKLPSILSPTIKKNQAVPKEIKQKLQKYCRTCAGLKVPLIDIFSDKGNQMRLFQQIQHLEDIDKDDSLSTQMCMDCIYDMKISYKFFMQIKKAEMKLKLICDSYSSVLSKPASVDIENETDDKTKKCLPLVLDKLVSKENETNFNDKGGNCEASDTEYSETNETYDQEIQNSFEEFEAPDSSQDCQEEKVDNTELEKTIKEEVNQLELSSNAKNTAYKYDESINAYIKIEVDKESTPNAEPQSSTVKSVPKDETTTIVHSKTPNILKRKLSSGNISDDSAEKISKKDLQKLNLDLKVKIPKLNLQDSVSVKSEEDGVMYVTAKGSNPNEMLLIKVRKVDKSLEKKSDKVHGKKKSDAAAALKPFLKFDNRDQTDIDKQIEQYKKKRVQVLGDIANLTDEEIKGASEIRTLEKNELKVNDIEMKEAAKIKDNSNSSETIIETISPKNIQLSEKTKLKLMDNKLKYTELTKEAQEDCIERLKSVLKQKDEYITEFMSYLKQRKITVTRLRNEDLISLYETKNNVVIDRDDDEFAESMNPREKYDCDFCFRTFASQELENEHSKIHEFRIMHFCEDCKQEFLTHKAKRAHNNACAEKIICKYCKKILDSKGKKRQCEQKHSDEQHGQLCDRCGEKFKHLGTLDQHVKSKHMHLEKIFKCPQCPKRFALRTKLTFHLKTVHTNCRAFLCEDCGSDFKNPASLRHHRIRKHQTANSRKECPECHKSVPVYSMSKHMHTHKAYSIACAHCDKKFKNTSTLKQHLRIHEDQRQYKCDTCGVGFNRRDGLRLHLKVHEKPDSRGLKECACQVCGDKFPNHSMLVIHRNRTHKDGRNYTCHICNRSMMTTRSLEWHLAHIHNETLPGILKECSSIDAETKRVACVHCDKTFKTEMILRNHVKNTHVEKEPMKCLDCDEVFTSEVRLKHHMMVQHGRLEGTFPCPHCPKRFVNQLRLKTHMISHSDERPHTCDVCNFMLKTKIQLIKHKQNRHSNERPLQCRYCEHTCKQVSALVCHERTHTNERPYSCSVCQQRFKYLGDKNKHERRHESLGGTGFKRIVTGRNTNKGGKKKSREATEQDQDQEHELEQGDEECAAQTEIIEGFQEGALIKLKDGQVITGTSNAAFEQIVMEDPTQGTSNTEIIVGVEEGTVYTEEVTSDHIEPQIIIPEIIDESVLQPGTVIQIQQQDETGEIKIVPFMLSMSDLTDVNTEINLTTASITYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -