Basic Information

Insect: Anagyrus pseudococci
Gene Symbol: -
Assembly: GCA_030522585.1
Location: JAPYYQ010000210.1:52984-53991[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.16 22 6.6 1.6 1 23 77 100 77 100 0.87

2 9 0.12 17 7.0 4.0 1 23 110 133 110 133 0.86

3 9 0.0009 0.13 13.7 0.7 2 23 142 163 141 163 0.97

4 9 1.9e-05 0.0027 19.0 0.2 2 23 170 191 169 191 0.97

5 9 4.5e-05 0.0065 17.7 0.3 1 23 197 219 197 219 0.96

6 9 0.096 14 7.3 0.6 1 23 228 250 228 250 0.96

7 9 0.00012 0.018 16.4 0.0 3 23 257 277 255 277 0.97

8 9 3.7e-08 5.4e-06 27.4 1.2 1 23 283 305 283 305 0.99

9 9 4.4e-06 0.00063 20.9 3.4 1 22 311 332 311 332 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.16	22	6.6	1.6	1	23	77	100	77	100	0.87
2	9	0.12	17	7.0	4.0	1	23	110	133	110	133	0.86
3	9	0.0009	0.13	13.7	0.7	2	23	142	163	141	163	0.97
4	9	1.9e-05	0.0027	19.0	0.2	2	23	170	191	169	191	0.97
5	9	4.5e-05	0.0065	17.7	0.3	1	23	197	219	197	219	0.96
6	9	0.096	14	7.3	0.6	1	23	228	250	228	250	0.96
7	9	0.00012	0.018	16.4	0.0	3	23	257	277	255	277	0.97
8	9	3.7e-08	5.4e-06	27.4	1.2	1	23	283	305	283	305	0.99
9	9	4.4e-06	0.00063	20.9	3.4	1	22	311	332	311	332	0.95

Sequence Information

Coding Sequence: ATGGCGGAAGCCGACGTCGTCGAGGATGTCGAGCTGAACGAACTGAAGCTGTTCGACTACGATCACCTGCTGAAGTTcgcagacgacgacgacgcggacAACGAAGATCACGCAGAAACGAACGTCGAGAACCGGTCGAAAGATGAAGCCGAAGAAGGCGATGTCCAGCAACCGGAGCCGCTGGAGAGTTTTCTCGTGCGTACGGCATCGGGCTCTCTGCACCGTCTCTTCCCCTGTAGCCAGTGCGACCAGGTGTTCGGTAGCGTTAGGCACTGTCTGATCCATATAATAAACACTCATCCAGAGTCGCGCAGGTACAGAGTTGCCTACCGCTGCAAGACCTGCCAGAAGCTCTTCCGCTCGAAATCCATCTGCGAGCGTCACGTTCAGTCCGAGCACAAGTGCCAGCAGCGCGACCAGCTGACCTGTCGCTACTGCGCCTTCAGCAGTCCCAGTCCGAGCTACCTCAAGAAGCACGAGCGCTCGCACATCGACGACTTTCAGATCCGCTGCGAGCTCTGCAACAAGGGCTTCAGCTCGCGGGCTCTGCTCGATCGGCACCTCATCAGCCACACCGGCGCCAAGCCCTTCGTCTGCGAAATCTGCGGGGCTTGCTACGCCGACAAGCGCAGCCTGCAGATGCACGCGACCATTCACGATCCGGCTGGCAGGCCGAAAAAGTACAACTGCGACCTCTGCGACTACTCGAGCTTCTGGAAAAACGCTGTCAAGACCCACATGAAGATACACACCGGTGCGAAGGTCATTTGCGACGAGTGCGGCCAGCCCGTGGCCAGCAATTACTATCTCAAGGTGCACAAGCGAATACACACGGACGAGAAGCCCTACACTTGTGATGTTTGTGGTAAAAAATTCCGGCAGATGAAGAATCTCGTTGTGCATCAGAGGACTCACAGTAAAATTAAGCCCTACAAGTGTACAGTCTGCAATAAGAGCTTCTCGCAGAACGTCTGGCTCAAGAAGCACAAGTGCACGGCTACGGCCTAA
Protein Sequence: MAEADVVEDVELNELKLFDYDHLLKFADDDDADNEDHAETNVENRSKDEAEEGDVQQPEPLESFLVRTASGSLHRLFPCSQCDQVFGSVRHCLIHIINTHPESRRYRVAYRCKTCQKLFRSKSICERHVQSEHKCQQRDQLTCRYCAFSSPSPSYLKKHERSHIDDFQIRCELCNKGFSSRALLDRHLISHTGAKPFVCEICGACYADKRSLQMHATIHDPAGRPKKYNCDLCDYSSFWKNAVKTHMKIHTGAKVICDECGQPVASNYYLKVHKRIHTDEKPYTCDVCGKKFRQMKNLVVHQRTHSKIKPYKCTVCNKSFSQNVWLKKHKCTATA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -