Apse004882.1
Basic Information
- Insect
- Anagyrus pseudococci
- Gene Symbol
- ZFX
- Assembly
- GCA_030522585.1
- Location
- JAPYYQ010000596.1:4767-9889[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 2 2.8e+02 3.2 0.1 3 23 42 62 41 62 0.94 2 15 1.2 1.8e+02 3.8 2.6 1 20 1057 1076 1057 1080 0.76 3 15 0.00047 0.068 14.5 2.9 2 23 1173 1195 1172 1195 0.97 4 15 0.00037 0.054 14.9 0.4 2 23 1208 1229 1208 1229 0.98 5 15 2.1e-05 0.003 18.8 2.3 2 23 1232 1253 1231 1253 0.97 6 15 0.03 4.3 8.9 2.8 1 23 1259 1281 1259 1281 0.96 7 15 2.9e-05 0.0042 18.3 4.5 2 23 1288 1309 1287 1310 0.95 8 15 0.13 19 6.9 3.7 5 23 1323 1341 1322 1341 0.97 9 15 2.6e-05 0.0038 18.5 1.5 3 23 1348 1369 1347 1369 0.97 10 15 0.012 1.7 10.1 0.3 2 23 1385 1405 1384 1405 0.97 11 15 4.9e-05 0.007 17.6 1.2 1 20 1411 1430 1411 1433 0.92 12 15 9.9e-05 0.014 16.7 2.7 1 23 1441 1463 1441 1463 0.99 13 15 0.0028 0.4 12.1 3.2 1 23 1469 1491 1469 1491 0.97 14 15 2.7e-06 0.00039 21.6 3.8 1 23 1497 1519 1497 1519 0.99 15 15 0.0033 0.47 11.9 8.7 1 23 1525 1547 1525 1548 0.95
Sequence Information
- Coding Sequence
- ATGGATCTGAGCACAGCCGTAAGCGGGATGTCAGGCGGCGGCGCATCGGCGGCCGGGACGCCGGCCAGCAGCCCCATCAgcggagctgctgctggcggaggaggaggaggcggcgcgGTTGCCTGCCCGGTCTGCACGTTGTACCTGCGCGAGGGTATCAGCCTGCAGAAGCACTTGGACACGCATCCGAAGGAGCAGGTGATCGAGGCGCTGATCCGGGCAAGCGCCGGCGGCGGAGCAGCGGCCCTGCTCGCCAGCCAGGCATGCGCTCCGAGCCCTCAGCCGGCAGCCGTCCAGGTCCCGACGACCCAGCCACCGATGCCCCCGGTTACGGCCACTGCACAACAGCCTCCGCCGGCCTCGCCCACTCCGCATGTTCCTCACGCCCAGTCGCCCTACCCGATTGGGCCAATCTTCGAGTGCCCGCCGCAGATCAACGCCATGCTACCTCCACCGCAATTTGCTTCCTTCAGTTATCAGCAGTTCGTCAATAATGGTACCATGATGATACCGGCACAGTACGCGATGGCACAGGCGCAAGCTCCACCCTCGAACCAAATGATGCAGATGCTGTACAGTCCTTACGGCATGTATCATCAACAGCAAATTCCAACTGTGCAAATGATATCAgcgccaccgccaccgcctcaAGCAATGATGCCAAGTACGACGGCGCCGCTGCCTGTAGCGAGTACTGTGGCCGCTGCGACGACGCGCATGAGGCCGGCCGTAGTTGCTGTAACGACGAGTGCTGCGAGCCACGCCGTCACTGCCACCGTTAATGATCCCGCGACCTCTACATTGACGACAACAGCCTCGCCGCCGAGACCAACCATGTGCGCGCCCGAGCCTCTGCCGCACGTGCAGCAGGCAACGGCACCACCTCAGGTCCAATCGCAACAGCAACACCAGCAAGAGCCTACAGTTGTTGACCAATGTAAGGACCGCGAACTTATCGTTGACGAAAAAATGATACCTGCACCCGATAGCATACTGCCTGATCTCGAAATGCCCGAGTCACCGGAATCGGTGCAAgtcgagcaggaggaggagagaagtaGATCACACGCGGAACATTTggaacaaactcaaaatgcacGCGTGCAAGAAGAGCAAAGCCATGTCGTTGAACAATATCATAGGGAGGATCAACCTACATTAATTAGTAACTCTTGCAATGATGTTACTGATGATGATAAGACTGAAAGTATCCTACCAGATATTGAAGACAACGATGAAATCGAATCATTAATTGTTCGAAAACCTAATTCTAGATCAGAGAGTCATGAAAACAGTGATAGAATGGAAGTGACCGAGTCCGTTCAATCACGGGAAATGTTAATCTCTAATGATATGATGGAAAAGGAATTTGTTGAAAACATTCAATGTAATGAAGTACACAATTGTAAAGAATTGGATGACAAATCTAATGACGTACAAATCATTAACGAAAAAGTAGAGCCTCAGAATATGAGTGTCGACGAATCTCGAGTTTCTACGATCGACAAACCTGAATTTGAACAAATGAAtcgattattaaataacatgGAATCCGAATTAAGCaatattgatttatcaaaTAAGGAATCTGAAGACATAAACAATAGTAAATGCAATGAAGCAGAACAGAATGCTATGTCTGTATCGGATCCCCTTGAAAAGCAAGCTGATGAAGACGAGACGACAAACACCTCATATCATAAAACTATCCTTGAGCCAATAGAATGTAAGATTATTGTTGCCCACGAAGATACTGATGTCTCATCCGTAGCCTCTTCGGAAGATGGCCTCATCAATTATGACATGGAAATTCAAAAGATCATGTCGACGTCAAAATCCTTCTACCAATACAAGTACTCACAGTCGGTACCTAACTCACCCGTCagtaaaaagaagttttaccGTTCATTATCCCGTGCCTCGCTGCCATCGGATTTTGACCGCTCAAACGAGAACGTCTGCTCATACCCAGTAGGTTTCGAAGCTACGACACTTCATGATTTTCTTAAAGACAATTACAATGATGAAGATATGGAGCTAGAAGATCCGCAGCCTCATCATTCGCatcttaaacaaaataatagtgTTATTCAGAGAACAATTTTGCATACGGATGATGTCTGCATGATGAAATCGCGACGCAGTGATGGCGCGGTCTCGCCTGTATCTGTTCGATCATCTTCTTCGTACTGCCAGatagaagaggaagaagaagacgaagaagaagaagattcAGATGATGCGGATAGTTGTGCTAGTGGACAGTCAAACGACAAAGACGAGGACGATGAAGATGAAGACGAGGATGAAGATCACATGATTCTGGGTGAAGGGTCGCAACGGACCCTTGGACACGAACACAGCGATAATAAAAAGGAAATGGCGCATACCGACATCTGCAAGGCTGTAACAGCCACCGACATTGCACAACAGCAACACTCAGACTTTCGATCTCAAAGCCTCATGACTGAGCACTACTCATCAAGTCAGTTTCCCACACTTAGCCATCATTCAGGACACCAGCAGTCACAGTCCATACCTGTACTTCACCACGATACGTATCCAATCTCGAACAGTGGTACCTCGCAGAATCTTCTCAACATGACCGAGTGTATTGATCCAACAACGAGCACAGATTCCAAAAGCTACAATTCAAGTTCACCCAAGTCATCGATTGTTCCTAAGCCGTCATCAACCGAACTACTCAATATCAGTGAGGACGCGCATGCAGGGCCCATGAACGTCTTTGAATTCGACGGACTGCAGATACTCGTGCCTAGCACTTTTATCAGTGAGTCATCGCAAAAGGCCGTTAGCGCTACAAGCCAACAATCTATGTCAAGCAGTGAAAATGGTGCGGGCAATGATGAAGAAGTTAAAAGTGTCAATATGAGGGCAGATGAAACGATGCCGGCTAGGGGAGAATTGTCCGAGCAAGAGAGTAATGGATGTACAGAGCAGTCTGCTTGGCAGttgTACATGGGCCAAGAGTCGTCTCGAATGTCAACTTCTTACGATTTAATGGCACGTGAAAGTTGGGAAGAGTCAGAGGGCTCAGAACACGAAGATAACAATAGCGGACCTCTTCTAGACAGCCGTTCTCTTGCTACCCATTTCACCTCTAGCCTGTTCCTTGATCGCGATCGTAAAACACCGACTAGACGGATCTTTAAATGCTCGCACTGCCCGGAGGTGTTCGAGTGTCCAAAAGAGCGTCGTGTGCACAGCACGATGGTACATAAAGAAGCTGGGCCATCGAGCTGTAGTAACGATAATATTGACCAACCCGAGCTGAAGGAGATCAAGCTGCTCGAGGGCCGAGCCAACGTCTTTGAGGACATCTTCGCACCCGGTGGCCTTCATTTGGCTCAACAAGCGTACCAGGCACAACATCTTCAACAGCAGCAACCGTTGCTCCATCAGCTGCAACCACCTCAACAGCATCAGGGCTCAGCCAAGGCTGATGCAGATGTGAAGCTTACTGATGGACTCCATCTGGCTACTGCAGCTGAGGTTACCTGCAGCTTGTGTAATCAGCGTTTCAGTAGCGAAAAGTCGCTGCAGATTCATCACAGACGTATGCACATAGCGGAGCCGGTTAAACGTGTACGCGAAAACGCCAAATGTCAGATCTGTAATGAGGAGTTCACTTCAGTTGCTAATTTCAATCTACATCTGAAGATTCACCCTCTAGAGTGTGGTCAGTGTGGCAAGTACTTCTACCGCAAGCAAAATTTCAAGCTCCACATGAAACGGCATTTGGGTATCAAGCCATTCTCCTGTAACCACTGTAACAAGGCCTTTCTCACGAAACAGAAACTTGACGAGCACACAAACGGTCACACTGGTAATGCGCCTGTCAAATGCAACCTCTGTAACGAGACTTTCCGACGTTACTCAAACCTTACGCAGCACAAGAACCGTCACCATCTGAACATTAAGAAAAAGCTGAAGGATTATATCTGCCATTGCGGTGAGGTTTTCCATACGAAGAAAAAGCTTGCTTGGCATAAGGAGACACACGACGAAAAGCCGAAGGCTTGTACCTACTGCAATGAGCGTTTCATTCATATGGCCAGTCTGACACGGCACATGCGTCGTGCACATAACCGACGTTTCGTGCCGGATGCCCAGCGCGAAAGCGAAAATGTTGAGTGTCCAATCTGTAAGTGCATCTACCTGCGCTCTTCGCTAGCCGTGCATATGCGTGTACACAACGGTGAACGGCCGTACGAGTGTCAGGTGTGCTCCAAGACGTTTAGTACCAAGTGGAATCTTCAGCTTCACAAGTGGACTCATGCGGCTCGCAGTACCAAGCCCTTCAAGTGTAACCAGTGCAGCGCGGCTTTCTACCGACACAGCGACTACACGGCACATATGAACTCTCACCGAAATGTGCGGCCCTATACTTGTAACTACTGCGGTGCCCAGTTCATTCGCAAATACAACTGTTTGCGCCATGTAAAAGAGCACGAAGAGAATAAGGCTTACACCTGCGAGATTTGCAACAAAACCTTCCATCGCTCTTATTATCTCAAAGAACATTTACGTGTGCACTCCGGCGCGCGTCCTTACGCTTGCCATATTTGCGGCAAGTGCAGTAGCACAAAGTCCAATCACAATAAGCATGTCAGAATCCATCATGCTCGCGAGCCTGTTAATACGgagaattaa
- Protein Sequence
- MDLSTAVSGMSGGGASAAGTPASSPISGAAAGGGGGGGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIRASAGGGAAALLASQACAPSPQPAAVQVPTTQPPMPPVTATAQQPPPASPTPHVPHAQSPYPIGPIFECPPQINAMLPPPQFASFSYQQFVNNGTMMIPAQYAMAQAQAPPSNQMMQMLYSPYGMYHQQQIPTVQMISAPPPPPQAMMPSTTAPLPVASTVAAATTRMRPAVVAVTTSAASHAVTATVNDPATSTLTTTASPPRPTMCAPEPLPHVQQATAPPQVQSQQQHQQEPTVVDQCKDRELIVDEKMIPAPDSILPDLEMPESPESVQVEQEEERSRSHAEHLEQTQNARVQEEQSHVVEQYHREDQPTLISNSCNDVTDDDKTESILPDIEDNDEIESLIVRKPNSRSESHENSDRMEVTESVQSREMLISNDMMEKEFVENIQCNEVHNCKELDDKSNDVQIINEKVEPQNMSVDESRVSTIDKPEFEQMNRLLNNMESELSNIDLSNKESEDINNSKCNEAEQNAMSVSDPLEKQADEDETTNTSYHKTILEPIECKIIVAHEDTDVSSVASSEDGLINYDMEIQKIMSTSKSFYQYKYSQSVPNSPVSKKKFYRSLSRASLPSDFDRSNENVCSYPVGFEATTLHDFLKDNYNDEDMELEDPQPHHSHLKQNNSVIQRTILHTDDVCMMKSRRSDGAVSPVSVRSSSSYCQIEEEEEDEEEEDSDDADSCASGQSNDKDEDDEDEDEDEDHMILGEGSQRTLGHEHSDNKKEMAHTDICKAVTATDIAQQQHSDFRSQSLMTEHYSSSQFPTLSHHSGHQQSQSIPVLHHDTYPISNSGTSQNLLNMTECIDPTTSTDSKSYNSSSPKSSIVPKPSSTELLNISEDAHAGPMNVFEFDGLQILVPSTFISESSQKAVSATSQQSMSSSENGAGNDEEVKSVNMRADETMPARGELSEQESNGCTEQSAWQLYMGQESSRMSTSYDLMARESWEESEGSEHEDNNSGPLLDSRSLATHFTSSLFLDRDRKTPTRRIFKCSHCPEVFECPKERRVHSTMVHKEAGPSSCSNDNIDQPELKEIKLLEGRANVFEDIFAPGGLHLAQQAYQAQHLQQQQPLLHQLQPPQQHQGSAKADADVKLTDGLHLATAAEVTCSLCNQRFSSEKSLQIHHRRMHIAEPVKRVRENAKCQICNEEFTSVANFNLHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFSCNHCNKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKTFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCEICNKTFHRSYYLKEHLRVHSGARPYACHICGKCSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -