Basic Information

Gene Symbol
ncor1
Assembly
GCA_030522585.1
Location
JAPYYQ010000002.1:130256-138568[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-08 2.6e-05 25.1 0.0 3 43 770 810 769 811 0.97

Sequence Information

Coding Sequence
ATGGCGACCATCGCTGCGCAAATCCTGTGCCAGGGCCAATCGCGCGCGCCATTGCCAGCAAAGCCGCCGACGCCACTGCCGAACAATTCGCTGCGCTCCGCATTCGAGCCCCAGCAGAGCTACGGTCCAAGCTCCCACCGAGCGGTGTCTCCGCGGACGGTCGAGGGTAGCGGTGTTGGGGCCGTCGGGGGCGGCGGCGCTGCTGCGgcgggcggcggcggcgggcccGGTAGCGGCGGTGGCACCGGTAGCCTTGCCgtcggcggtggcggcagcgGCGTCGCAAACGCAGCAGCACGTTACCCCCTTCACCACCTGCCGCACCAGCAGCAACCGCCACCTCCGCAGCCAGGGCCGCCACCGTCAGcagctcagcagcagcagcaacagcaggcTTCGACAGGAGGATCGAGTGCCCCGCCACCCCACCCGCACCACTACTATCACTACCCTCATCTACCGCAGCATCATCACTTCCAACAACACCATCACCATCAGCAAGttgcagcagccgccgccgccgccgcagcttCTTCATCATCGTTGGGATCCTTGGCGATGAACAGTGGCCCGGCTGGCGGCCCTGGCCAGCCACCAGCGGGACTACAACCCACCTCCTCCACACCCTCGTCGCGGGATCAGCATACGCAAGGAAGCGACCCGAGCGGTCTCAACATCACAATAATGAACATCACGGTGCCGCCGGTGGTGCCGGTACCTGCGAGCCTGCGCTTCGTTCACCCGTAcctgccgccgccaccgccgcatCCGCATCCACCGCTATCGCAGTCGGTCGCCTCGGTGGCCCAGGTGGCCTCCTCGAACTCGGCCTCGCCGGTCTCCGCCTCCTCGGGCCCGAGTTCTATCGTCCAGGTCGGCAGCAGGCAGCACCCCCCGTCCGCGCCCTCCCCGGCCTCGATCGCCTCCAGTGCGACTACCGCCTACACTAGAGACGCCTATCGCAATCCCAGTCCTAATatAAATGAGAGGGTTGCGATAAGCGTGAGTAGCAGTCCGGTATCATCGCAGCATCAGGTCGTGGGGATTGGTAGCGACTACGTCGTGAGCGGGCGAGCCGAGCGACCGCGGATATCATTGCTACCGTCGCCAGCATCGATACCTCCCTCGGCCTCGCCAACCGCGCCCACAGACTACCACACGTCGGCAGTGCGCAATAACCGAGGCCCTGGCTCCTCCGGACCTGCAATTCTCGCAATGCAGCCTCAGGATTACAGGCCCAGCCCCGTCGATATAGCACAGCTGCAGCATGATGCGCCGCCCTTCAAAAAGATTAGGCTCAGCCAGCCCACGCAACAGCTGCCTCCGCCACACACGccgccccagcagcagcagactcagCCGCAGTCGATAGTTCAGACGCTTCAGCCCCTCAGGATAGATACGAGGCCAACTTCTGGTGTTTATACGCCACAAACGGAAGCGATCTCGCCAACATTACCTGAGCCCACGACACAAGAGGATTGGGTACTGAAGAAAACCAAAGATGAACTTCTTGCACAACTTTCTAAAGTCGATAGGGAGATCTCAAATAAAGAGTCGCAAGCTGGCATACTTCGTAAAAAGCTTAAGGAATTGGAAGAAAATCAGTCACTGGAGGCTGGAAAGCGGCCGGCTGAAGAAGCCTCGCAACAACCTAAGCACCAATcgaatatacaaaaaatttatgcgGACAACAGGAGGAAAGCGGAGGAGGCGCATAGGCTGCTGGATAAGCTGGGTCCAAAAGTAAAACTGCCACTTTACAATCAGCCCTCAGACACGAGTATATATCACGAGAATCGGGCGAGGCATCAGTGCATCAAGACACACCTCGTTGCACGGCTGCGCAAAGAGTACTCGGAACGTAACACTTTGCGCCAGCAGCAATCTCAGACGTATGCCATACTCGTGCAGGAGTGGCACCGTAAAGTTGAAAAGTTGGAGGCGACACAGAAGCGTAAAACGAAGGAGGCCAAGAACCGCGAGTTCTTCGAAAAAGTCTTCCCAGAGCTGCGTAAGCAGCGTGAAGATAAGGAGCGCTTTAATAGGGTTGGCGCACGCATAAAAAGCGAAGCTGATCTTGAGGAAATTATGGACGGCTTGCAGGAACAGgagGAAGAGTTGTCGACTGAGCAAAAAAATGCGTTAATAGCTCGTCAGATGGAGGACAAAAAGATGCGCTCGTACGCTGTGATCCCGCCACTTTTGTTGGACTCaaaacagcgaaaaatcgCATTTCAAAACCGCAACGGACTGCTACAGCCTGAGGAGCTCGAGGCGCTTCATagcgaaagaaaaatgatcaaCGTCTGGAGCCAGACCGAGCATGACATGTTCAAGGAAAAGTACCTCCAGCATCCCAAGAATTTTGGGGCAATAGCACAGTCGTTTGAGCACAAGTCTGTGTCTGACTGTGTGCATCATTATTACATTACCAAGAAAGCGGAAAATTATAAGCAGCTACTACGAAAGTCGAGGCGTACGCGTAGCTCTCGAAACAATCCTAACAATAAGGTAAATAATAGTAACACCACAATCGGACCTATAGATATATTAACGACCGGAGTGACGACGAGGCTGCAGCGTGAGCAGCAACAAAAGACTCAAGAAAATCCACAGAACAATTCTGCGTCAGcaagtagtagtagtagtagtaataGCAGTAGTACTGCGACTACGACGATGTCGGCTCTATCGACAAGCATCTCGACCTCGGCCTCGTCGACATCGGTCACGAGCTCTGCCGGCACACCGTCGTCGTTTAGTTCAGGTTCTGCCACCGTTGCCACTTCGAGCAGTAGTAATTCGGTGAGCAGTGCTACCGCCACCACCACTCTGTCTTCTGAATCCCTGGCGTCCGctacgacgacaacgacgtcGACAACGATAACGACGtcgacagcggcggcgtcaTCAGTATCCGTCCTGAGTACCAGCGCGACAACGGCGACGTCGAGCGTACTCACCACGACGTCCTCGTCGTCCGCTAGCGCCAAGGACGTCCGTGAGgcgaataatgaaaataaggaTATCAAAACGGAACCAAAAGACACCTTACTGATCAAGGATATTAAAGAGGAGTCACAGTCGAGTTCTGAAACTCTTTCCAGTAGGGAAATAAAAGTCGAGGCCAAGACTGCTCTAGCTTCATCGTCGGGCGTAGCCAATACGATTAATGCGAGCAGCTCTCTTTCGCacgagcaacagcagcaacagcaccagaaagataaaaagaagaacGCGGCCATAGGAGGCTCGACCGCGATAAGCAGGTCGAAAGATAAGAAGAAGGAGAACCATGCGGCCCCCATGGAAACCAGCGATGAGGAATCCCAAGCAATGGACGCCATTGTTGATAAGTAA
Protein Sequence
MATIAAQILCQGQSRAPLPAKPPTPLPNNSLRSAFEPQQSYGPSSHRAVSPRTVEGSGVGAVGGGGAAAAGGGGGPGSGGGTGSLAVGGGGSGVANAAARYPLHHLPHQQQPPPPQPGPPPSAAQQQQQQQASTGGSSAPPPHPHHYYHYPHLPQHHHFQQHHHHQQVAAAAAAAAASSSSLGSLAMNSGPAGGPGQPPAGLQPTSSTPSSRDQHTQGSDPSGLNITIMNITVPPVVPVPASLRFVHPYLPPPPPHPHPPLSQSVASVAQVASSNSASPVSASSGPSSIVQVGSRQHPPSAPSPASIASSATTAYTRDAYRNPSPNINERVAISVSSSPVSSQHQVVGIGSDYVVSGRAERPRISLLPSPASIPPSASPTAPTDYHTSAVRNNRGPGSSGPAILAMQPQDYRPSPVDIAQLQHDAPPFKKIRLSQPTQQLPPPHTPPQQQQTQPQSIVQTLQPLRIDTRPTSGVYTPQTEAISPTLPEPTTQEDWVLKKTKDELLAQLSKVDREISNKESQAGILRKKLKELEENQSLEAGKRPAEEASQQPKHQSNIQKIYADNRRKAEEAHRLLDKLGPKVKLPLYNQPSDTSIYHENRARHQCIKTHLVARLRKEYSERNTLRQQQSQTYAILVQEWHRKVEKLEATQKRKTKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEEELSTEQKNALIARQMEDKKMRSYAVIPPLLLDSKQRKIAFQNRNGLLQPEELEALHSERKMINVWSQTEHDMFKEKYLQHPKNFGAIAQSFEHKSVSDCVHHYYITKKAENYKQLLRKSRRTRSSRNNPNNKVNNSNTTIGPIDILTTGVTTRLQREQQQKTQENPQNNSASASSSSSSNSSSTATTTMSALSTSISTSASSTSVTSSAGTPSSFSSGSATVATSSSSNSVSSATATTTLSSESLASATTTTTSTTITTSTAAASSVSVLSTSATTATSSVLTTTSSSSASAKDVREANNENKDIKTEPKDTLLIKDIKEESQSSSETLSSREIKVEAKTALASSSGVANTINASSSLSHEQQQQQHQKDKKKNAAIGGSTAISRSKDKKKENHAAPMETSDEESQAMDAIVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00877800;
90% Identity
-
80% Identity
-