Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_030522585.1
Location
JAPYYQ010000066.1:31605-33881[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.7 1.3e+04 -2.7 0.0 1 9 260 268 260 269 0.85
2 3 1.4e-08 2.7e-05 25.1 0.0 2 38 298 337 297 344 0.88
3 3 1.1e-08 2.1e-05 25.4 0.1 2 44 378 425 377 427 0.87

Sequence Information

Coding Sequence
ATGAGGTTAACCAGGTCCCACGCTTTCTGGCCGATCGGCCTGATACTTATCTGCTGGTGCACCGCTCCGGCCGGTGCCTGGGACGAGGCTGAACTTGAAGTTTTCGACGTCGTCGAGGAGGTCAATGCCAATTTTTATGAACTCCTCGGCGTGCCCAAGGATGTCAGTTCTGCAGAGATTAAGAAAGCTTTTCGAAAGCTATCACTGCAGCTTCACCCAGACAAAAATTCAGCTGAAGATGCAGCAGTACAGTTTCGAAATTTAGTATCAGTTTATGACGTCCTTAAAGAttctaaaaaaagagaatactACGACAATGTTCTTGTTAACGGGCTGCCCAACTGGCGGTCTGCTGTATATTATTATCGCCATGTGCGGAAGATGGGCATTTTGGAACTTAGTAtcattctttttataattattacaattgGTCAGTATTTATATGCATGGGCATCATATTTTGAAAGAAGATACGATGttgaACAAGTTGTTGGAAGTAAACTGCAAAAGttgcaaaaaaagaatagaaaaggTAAAATGGAAATTCCTGATTTGGCAGAAATTTTGGACAAGATTCCTTTGCCAAGTATCAAGAATACTCTTCCATTCCAGTTGCCAAAGTGGACTTACTTTTCCATTGTTGGTATTCCAAAAACTATTTGTGCTGTATATAACTTATTAGAAGCgcaaaaacaaaggaaaaaagaagaagaagaagctctaGCTCAAGAAGAAGAACCAGAACCAGAACCGATACCTCGTGGACCAAGAAGACGACGTCAGGCTTTTACACCACAGGAGCGTAACGAGAAAATTGCCagagaaaatttaagaaaattaaacaatgaGACTGCAAATCATCAAGTTCCTGAAAAACCTAGAATTAGTGGAGGTCTTTGGACTGATGATGATTTACACGAGCTGATCAGGCTCGTCAAAAAATATCCCGGAGGCACGCCAGAGCGCTGGGAAAAAATAGCCGACATGATGAATAGAAGTGTCCATGAAGTAACGCACATGGCAAAAAAGGTCAAAGATGAAGGTCTGAGACCTAGCCAGCCTGAAGAAGAAGTGCCAGTGGAAGAAGCTcctaaaaaagttaaaaccCGTGCTGAGGCTGTTGAGGCTACCAATGACTGGAGTCAGGATCAGCAGAAAGCACTCGAAGCAGCATTATTAAAGTATCCTAAAGGAGGCTCAGGTGATAGATGGGAGAAAATAGCAGCATGTATTGAAGGCAAAAATAAGgaaGAGTGTCAAGCTCGTTATAGATATTTGGTTGatgttgtgaaaaaaaaacagacacAGTGA
Protein Sequence
MRLTRSHAFWPIGLILICWCTAPAGAWDEAELEVFDVVEEVNANFYELLGVPKDVSSAEIKKAFRKLSLQLHPDKNSAEDAAVQFRNLVSVYDVLKDSKKREYYDNVLVNGLPNWRSAVYYYRHVRKMGILELSIILFIIITIGQYLYAWASYFERRYDVEQVVGSKLQKLQKKNRKGKMEIPDLAEILDKIPLPSIKNTLPFQLPKWTYFSIVGIPKTICAVYNLLEAQKQRKKEEEEALAQEEEPEPEPIPRGPRRRRQAFTPQERNEKIARENLRKLNNETANHQVPEKPRISGGLWTDDDLHELIRLVKKYPGGTPERWEKIADMMNRSVHEVTHMAKKVKDEGLRPSQPEEEVPVEEAPKKVKTRAEAVEATNDWSQDQQKALEAALLKYPKGGSGDRWEKIAACIEGKNKEECQARYRYLVDVVKKKQTQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-