Apse012695.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anagyrus pseudococci
Gene Symbol
clz9
Assembly
GCA_030522585.1
Location
JAPYYQ010003903.1:1641-6215[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.3e-08 3e-05 24.5 0.0 6 35 78 107 75 112 0.92
2 2 9.7 1.3e+04 -3.1 0.0 27 40 448 462 448 464 0.86

Sequence Information

Coding Sequence
ATGGGTCAACAGCTGCTGCACTGTTGGCCTCAGCGATCCAGATCTTACATGCTTATGGCCCTGTTATTGGCCCTGTTATTGTCGTTCAAGACTCCCGTAAAGACAATGAAGGCACAggcaacaaaaacaaaaaaaaagaaatctaacaaaaaattgaaaaaagatatTAATAAAGGACTAagtaacaaaaagaaaagaaatacgTATCATTCTTATGAAGCTGGAATTGTACAAAAAGCCATAGAAGAAGTACAAAATGGAAAATCTCTTAGGCAAGTTGCTTCTCTTTatggaatttcaaaaagttCTTTGTATGATAAATTGCACAGTATTAGACCATTGGAAACTTTGAGAGGCCATACAATTTTGAGCAAAGAAACAGAGAATGACGTAGAAAATTGGATTTTGAAAAGTTCTGAAAGAGGATTTCCTGTCACCAAAACTCAGTTGTTAGACTGTGTCCAAAAACTCGTATTAGAAACTGAAGCGAGCACTCCATTTAAAGATGGTAGACCAGGAAAAGCTTGGGTAAAAGGATTTATGAAGAGACATCCAACGTTGAGCAACAGATTAGTACAAAATCTCACAAGTACGAGGGCTGCAGTAAGCGAAACACAATTGAGGCAATGGTTTTCTCATGTGAAGGATtacttggagaaaaaaaatcttcatgATATAGAAAGAAGCCGAGTGTTTAATTTAGATGAGTCTTCTTTTAAACTTGTACCAGAAAGAGGGAAAGTCATCGCTAAGAAAGGCTCCAGAAACGTTTATCAAATTGTTGGCAAGTGTGAGAAATCCTGCAttacagttttatttattgcatCTGCTGCTGGTTTGTTACCTCCACCAATGATAGTGTTTGAGTGTAAGACAGCACCTAAGAGAAGTACTTTAATGCATGTACCTAAAGGATGGGGAGTAGGTCATTTAGAGAATGGTTGGATGACCTCGGAAAGTTTCTTTAGTTACATCAAGAATGTGTGGTTTAAATGGCTCATAGAAAACCAAATTCAATTCCCTGTTGTTTTGTACGTGGATAACCATATATCTCATCTCTCTAtggaattattgaaattttgccAAGATAATGACATTGAAATCATTGCACTGTACCCAAACTCCACGCACATCATACAGCCTCTTGATGTAGCCTTCTTCCACCCATTAAAAGATTTGTATAAGAAAGGAGTCGAgcaatataaaattcaaaacaatattattgaagttaaaaaatatatggtTGCTGCTGTTCTGAATCAAATTTTGgaagaaaatgattttggaGAAGTGCTCAGAAATGGATTCAAAAGATGTGGATTATATCCTCTCAACCCAGATGAAATCAACTATaacgttttaaataaagagagtaagagaaggCACCAAGATCAAGAGGCAATTGAAACACTCGTAACCTCTAATGAAAATAGCAATACAAGTAGCAACTATGATTTTTTGGACtacttcaataaaaatattttatctccAAGTACTCTAACAGCATTTACAGAAGAATCATTGAGTGACGAGTGGACTGGAGATCCAAGACTACATGAACTCTTTGCATCTTGGCAGAAAATGCAATCATCTTCATCTTGCGATACTGACAATATACCACGAACAGACAATCATAACTGCCAAGAATCAGACATTTTGACAGACAATGACGTAGGTTTACAAGAACCTGTTGAAAACTTTGATTTTAGTACAGAAAAAGAAGTTTCTAATTCCTCCTTAGTTGAGCCGTCAACAAGTAAACTTGACCAACCTATTACAATAGAAATCATATCAGAAATTAATGATATAATTGTGGAACCTACCCAAGAacttaacagtataattttaaaacccACCCAGGAacttaacagtataattttaaaacccACCCAGGAacttaacagtataattttaaaacccACCCAGGAACTTACTAGCTTTATCATAGAACCCAACCAAGAATTAACtcaagaaataaatgaaaattcttcTGAAAGTACTTGTGTACCTGAAGAACATTCAGTTCAACAAATTGAAAAGCAAGCACAAAATAATGAAGCAAGTTTACAAGttctTAACCTGTCCACAAATGATGTAGTCCAAGAATgtcaaaaaatttgtaatactGATAATGAACGCAATGaaCCAGTGTTTGaaagaattttcaaagtacCGAGCCCGATCACTAAGAAAACTTGTAAGAATAAGATTAAGAAAATTGATGGAAAATCCGCTTACGTTGTTGATGATTTACTGCAAGTTTTAGAAGCAAAACAGCAAGAAAAGATATTGAAAGAGAAGCAGAAGGAAttagaaaaacagaaaaaagaacaaaatagattaataagagaaaaagaattaaatattaataaagcacataaagaaaacaaattaaagttgatagctcaaaaaaaaaagattttggaGGAAATTAGAAATACcaaagttatattaaaaaatgaaaataCAATGGTAGATGGCCACCTGACAGACGACAACCCCCAGacagcagagcagcagcagcagcgagcagTCAGTAGGCAGGCAACCCTCCAGGCAACAGCGCAGCGACAGGAGCAGACCCACGGGCGGCAGCAGGGCAGAAGCCAAGAAACGGACGGCAGCCCATAG
Protein Sequence
MGQQLLHCWPQRSRSYMLMALLLALLLSFKTPVKTMKAQATKTKKKKSNKKLKKDINKGLSNKKKRNTYHSYEAGIVQKAIEEVQNGKSLRQVASLYGISKSSLYDKLHSIRPLETLRGHTILSKETENDVENWILKSSERGFPVTKTQLLDCVQKLVLETEASTPFKDGRPGKAWVKGFMKRHPTLSNRLVQNLTSTRAAVSETQLRQWFSHVKDYLEKKNLHDIERSRVFNLDESSFKLVPERGKVIAKKGSRNVYQIVGKCEKSCITVLFIASAAGLLPPPMIVFECKTAPKRSTLMHVPKGWGVGHLENGWMTSESFFSYIKNVWFKWLIENQIQFPVVLYVDNHISHLSMELLKFCQDNDIEIIALYPNSTHIIQPLDVAFFHPLKDLYKKGVEQYKIQNNIIEVKKYMVAAVLNQILEENDFGEVLRNGFKRCGLYPLNPDEINYNVLNKESKRRHQDQEAIETLVTSNENSNTSSNYDFLDYFNKNILSPSTLTAFTEESLSDEWTGDPRLHELFASWQKMQSSSSCDTDNIPRTDNHNCQESDILTDNDVGLQEPVENFDFSTEKEVSNSSLVEPSTSKLDQPITIEIISEINDIIVEPTQELNSIILKPTQELNSIILKPTQELNSIILKPTQELTSFIIEPNQELTQEINENSSESTCVPEEHSVQQIEKQAQNNEASLQVLNLSTNDVVQECQKICNTDNERNEPVFERIFKVPSPITKKTCKNKIKKIDGKSAYVVDDLLQVLEAKQQEKILKEKQKELEKQKKEQNRLIREKELNINKAHKENKLKLIAQKKKILEEIRNTKVILKNENTMVDGHLTDDNPQTAEQQQQRAVSRQATLQATAQRQEQTHGRQQGRSQETDGSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-