Apse018672.1
Basic Information
- Insect
- Anagyrus pseudococci
- Gene Symbol
- -
- Assembly
- GCA_030522585.1
- Location
- JAPYYQ010010265.1:374-1054[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-08 1.7e-05 25.3 0.0 1 38 10 46 10 48 0.92 2 2 1.3 1.7e+03 -0.3 0.0 17 24 125 132 120 133 0.83
Sequence Information
- Coding Sequence
- atgaaaaaaaacgttagaAGAAATTACACTAAAGACACACTTCAAAAAGCTCTTGTTGCTGTGAATGAAGGAAAATCATTCAGAACTGCGGCTAAACTGTTTGATGTGCCTGCAGCTACTATTCTTAGAGCAGTAAAGAATCCAGATAAAATTGAACCACGTTTTGGTCCTAGTGCTGTCCTCAGTGAAGAAGTGGAAAGTAGAATAGTTGACTGGATTTTGCATCGCTCTAAAACAGGTGATCGAGTAACAAAGCCAGAATTGCTAGAAAATATTAGAGCCTACGTAACAGTAAATAAGATTAAAACGCCTTTTATTGACAACAAACCTGGACGCCACTGGTATGAGGCATTTATGAAACGTCACCAGAATTTATCGCTACGTAAAGCTCAAAATTTGACAGCAGTTAGAGCCAATGTATGTGAAGAAGACTTGAGGCAATGGTTTAGTGatgttaaaaagtatttaaatgataaaaagttATTAGACATTGATGCTTTCAGAATATATAACTGCGATGAAacaagtattttatttaatccaaAGATGGAAAAAGTTTTAGCAGAAAAAGGCGCACCAACAGTATACAAAGTGATTGGAGGTAACGAGAAGGAAAATTTAACTGTTCTATTTACCTATGGTGCTGATGGAAGAAGAGCTCCTCCAATGAtctattattga
- Protein Sequence
- MKKNVRRNYTKDTLQKALVAVNEGKSFRTAAKLFDVPAATILRAVKNPDKIEPRFGPSAVLSEEVESRIVDWILHRSKTGDRVTKPELLENIRAYVTVNKIKTPFIDNKPGRHWYEAFMKRHQNLSLRKAQNLTAVRANVCEEDLRQWFSDVKKYLNDKKLLDIDAFRIYNCDETSILFNPKMEKVLAEKGAPTVYKVIGGNEKENLTVLFTYGADGRRAPPMIYY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -