Apse023462.1
Basic Information
- Insect
- Anagyrus pseudococci
- Gene Symbol
- -
- Assembly
- GCA_030522585.1
- Location
- JAPYYQ010022343.1:619-1146[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-10 3.5e-07 30.7 0.1 3 36 33 65 31 68 0.92 2 2 5.6 7.3e+03 -2.3 0.0 17 24 146 153 143 154 0.81
Sequence Information
- Coding Sequence
- ATgggaaagcaaaagaaaaaatcgagttttttaaaaacttcaaataaaaataaaacaaccaaaaaagagaagcctccaagaataaaatatgaaaaagaagcTGTTGAACGTGCTGTAAAAGCTGTAGATTCTGGAGTTTCTATAAGAACAGCTGCCAAGACATTTGGAGTGCCAGCAACAACAATTTATAgaataagtaaaaatccagatttaataaattctaaaattgGTGCACAAACTGTTTTGAGTACAAACGAAGAAGATGAAGTAGTAAAATGGATTTTATACAGAGCTCAGACCGGTAGCCCTGTAACAAAAACAGAACTTCTTGATAGTGTGCAACTCtatgtaaaaagtttaaagaaGAAAACTTCATTTACAAACGATAGACCAAGTAGACATTGGTACGAAGGATTTTGTAAACGTAATCCTAGTGTAACAATTAGAAAAGCTCAAAATTTACCTCTTGTACGAGCATCTGTGTCTGAAGAACAGTTGAGAAATTGGTTTAGTGAAATAATAGGATAA
- Protein Sequence
- MGKQKKKSSFLKTSNKNKTTKKEKPPRIKYEKEAVERAVKAVDSGVSIRTAAKTFGVPATTIYRISKNPDLINSKIGAQTVLSTNEEDEVVKWILYRAQTGSPVTKTELLDSVQLYVKSLKKKTSFTNDRPSRHWYEGFCKRNPSVTIRKAQNLPLVRASVSEEQLRNWFSEIIG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -