Apse009243.1
Basic Information
- Insect
- Anagyrus pseudococci
- Gene Symbol
- -
- Assembly
- GCA_030522585.1
- Location
- JAPYYQ010001748.1:6760-7584[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-11 6.4e-08 33.1 0.0 3 42 33 71 31 74 0.86 2 2 6.6 8.6e+03 -2.5 0.0 28 42 252 266 252 268 0.82
Sequence Information
- Coding Sequence
- ATGGATTCAACaagtaaaaagaaaggaaaacgaAAAGGGCAAGGAAAAGTTACTAAAAAAGAGACCAGggcgaaagaaaaatcatCTTATACAGTTGATAACGTTTTAGAAGCTTTGAACAGTATTGAAGTCGGAATGTCTCTTAGTGAAGCTTCTAAGAAATTTAGTATTCCAAAAACtactttgtataaaaaattaaataacattacaactGTGGAAACTAGAAAAGGTCCACCTACTGTTTTGCATGAAGCTGAGGAAGATGACATAGTAAAATGGATAGTATATTCTGCAGAAAGAGGCTTTCCAGTATCAAAAAGTATGCTACTCGAGACTGtacagaaatttataatttctcaaAATAGGAAAACTCCATTTACAAATAACCAACCAGGAAGACACTGGTATAAAAGTTTCATGCAAAGGCATCCCAATTTAAGTGTCCGATTAGCTCAAAGTCTAACAACAAGTAGAGCAGCTGTAACAGAAGATGACTTAAGGAAATGGTTTGATGATGTTGGAGTCCATTTAAGAAAGaacaatttgattaatttaaatcCAAGTCGGATTTTTAATCTTGACGAGTCTTCATTTTTACTTGTTCCTCCAGACAATGAAGTAATTGCTGCAAAAGGAGCAAAGTctgtatacaaaattgtaagtaaaaatgaGAAAGCGTGCTTGACTGTATTATTTACAGCATCTGCTTCTGGATTACTACTACCACCTATGATCTTATTTGACGTGAAAACTGTTCCTAAAAAAACGTACTGGAAAATATTCCAAAAGATTGGGCAGTTGGAAATACAGAAAAAGGATGGATGA
- Protein Sequence
- MDSTSKKKGKRKGQGKVTKKETRAKEKSSYTVDNVLEALNSIEVGMSLSEASKKFSIPKTTLYKKLNNITTVETRKGPPTVLHEAEEDDIVKWIVYSAERGFPVSKSMLLETVQKFIISQNRKTPFTNNQPGRHWYKSFMQRHPNLSVRLAQSLTTSRAAVTEDDLRKWFDDVGVHLRKNNLINLNPSRIFNLDESSFLLVPPDNEVIAAKGAKSVYKIVSKNEKACLTVLFTASASGLLLPPMILFDVKTVPKKTYWKIFQKIGQLEIQKKDG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -