Apse010671.1
Basic Information
- Insect
- Anagyrus pseudococci
- Gene Symbol
- -
- Assembly
- GCA_030522585.1
- Location
- JAPYYQ010002421.1:31084-31551[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-11 2.5e-08 34.4 0.0 1 35 22 56 22 63 0.94 2 2 0.47 6.2e+02 1.1 0.0 21 34 115 128 114 134 0.80
Sequence Information
- Coding Sequence
- ATGTCGTGCAAGACTCCTAATGATAAATCCAACGAAACACTGCGACGTCGAAGAAATACATGGAGCGAAGAGGACATGAAGCAAGCGATCAAGGCAATCCACGAGAAGACAATGGGATTGAAAAAAGCTGCGAAACATTACAACGTGCCAATGACGTCGCTTCGGAGATTAGCTTTGGAATTAACAAACTCCCCAACTGGCAGTAGTGtggcgattaaaaaaaagattggcCGCAGAACCGTACTGCCTGCCGCGCTCGAGGAGGAGCTCGTCCAGCACATACTATTAGCGGAAAAACAATTGACCGAACTCACGCCTGCCGAAGTCAAGTCCTTAGCTTATCAATTAGCCGTGAAACATTCCATTCCAAATCCCTTTTTAAACGAACGAGCCGGACGCAAGTGGCTCGACTTATTTTTACGCAGGCACAAAAATCGCctgtcaaagaaaaaattgaataaaacttGA
- Protein Sequence
- MSCKTPNDKSNETLRRRRNTWSEEDMKQAIKAIHEKTMGLKKAAKHYNVPMTSLRRLALELTNSPTGSSVAIKKKIGRRTVLPAALEEELVQHILLAEKQLTELTPAEVKSLAYQLAVKHSIPNPFLNERAGRKWLDLFLRRHKNRLSKKKLNKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -