Basic Information

Insect: Anagyrus pseudococci
Gene Symbol: Trl
Assembly: GCA_030522585.1
Location: JAPYYQ010001357.1:18295-20446[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 8.7e-08 0.00011 22.7 0.0 2 37 206 241 205 249 0.87

2 5 1.3e-13 1.8e-10 41.3 0.0 3 39 257 292 255 296 0.93

3 5 0.00078 1 10.0 0.0 7 34 314 340 310 346 0.85

4 5 0.63 8.2e+02 0.7 0.0 31 41 354 365 353 368 0.84

5 5 1.4e-11 1.8e-08 34.8 0.2 4 40 371 407 370 411 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	8.7e-08	0.00011	22.7	0.0	2	37	206	241	205	249	0.87
2	5	1.3e-13	1.8e-10	41.3	0.0	3	39	257	292	255	296	0.93
3	5	0.00078	1	10.0	0.0	7	34	314	340	310	346	0.85
4	5	0.63	8.2e+02	0.7	0.0	31	41	354	365	353	368	0.84
5	5	1.4e-11	1.8e-08	34.8	0.2	4	40	371	407	370	411	0.92

Sequence Information

Coding Sequence: ATGGACGAGGGGGACGAAAGTATGACTCTCACCACCACTATTACGTCCGACGCCGACGACAAGAGTCACAACATAAAATGCGAGAATTACCGGCTACAAATATTCGAGGTCGTACGCCAGCTCCTCGCCGAGGAGTCCATGGTCGACCTGACGCTATGCGTCGCCGGGGAACGCATAAATGCTCACAGGGTCGTTATGAGCAACTGCAGCTCTCTTTTCAAGGAGATCTTGTGCCGGGTCAATGAAGAACACACCACTATTATACTTCCTGGAGTGGAAGCACAATATGTGAAAgctattattgaattttgttaCAATGGAGAAATAAGAATTCCTTATGATGATATAGGAAGTTTTTTGGAAGCTTCtcactttttgaaaattgaggGTCTAAAAGataTTGCTGGAATTgttgatgaaaatgaaaattctaaagaaggagaagaattAGAAGAATATGTTCTTCAGGACTCAAATGCAATTAATTCTGATAGTAATCCAGAACACGTAAAACAGACTACTCCTAAGTCtaataaatctataaaaaGAAGGCTTACAAGCACAGATGCTAATGAGTTAAAACGAAGAAAGAGCGTTTGCAAAAAGGAATACACTAGTGAACAATTGGAAACTGctataaatgatattaaatcTGGATGTTCACTGCTGGAAGCATCTGTAAAAAATGGTATTCCTCGATCTACCTTGTATATGAGAACAAAAGCTTTAGGTATACCATTAAGTACTTCTAGATCTGATTATACACTTGAAGATATGAGGGCAGCAATACAATACGTTATAGagGGATCTAGTTTACAGCAAGCTGCTGATTGTTATGGAATAccaaaaacagttttatgGAGGAGAATTCAGAAAGAAGGtcatgaaattaaaaataaacgagaaacTAGAAAGAATTATGGTGATGAAAGAAGATTAGCTGCTGTAAAAGCCTTGGAGAGAGGAGATTCTCTAACTAAAGTTGCCAATGAATATAAGATACCTAAAACGACGCTATTTCGAGACAAAGCTCGCTTAGTAGACCAAGGAAAACTACCATCAACCTTTTGGAAACGACGTAAATCTGAaggtgaaaaacaaaaatattctcGTTTAGCAGAAGCTGTAGCAGCATGTAAAGATGGTACAATGTCCCAAGCATCAGCTTCAGCGCATTATAAAATACCAAAAACAACTATATGGCGCCGACTGCAAAAGGAACTCGCTAAGTCTAGTTCTCCGACTAaatcaccaaaaaaaaagaccgaacctttaaagaaaaaaacgctaATAAAATCAGAAGAATTTAATGAAGATGATTTTGAAGCCTATTGTCCAgATGAAGCGGAAATGAACATCACGTAcataaatgaagaaaatttatCAGAAGATCCAGTGATTATTCTAGCTGGTGAAGATACTGAAGAATTAAATAGACAATCTTATGTTGTTGTACACGAAGGTTCATctgaagaaaatttaatatcattaGAATATGATAGTATCAGATAA
Protein Sequence: MDEGDESMTLTTTITSDADDKSHNIKCENYRLQIFEVVRQLLAEESMVDLTLCVAGERINAHRVVMSNCSSLFKEILCRVNEEHTTIILPGVEAQYVKAIIEFCYNGEIRIPYDDIGSFLEASHFLKIEGLKDIAGIVDENENSKEGEELEEYVLQDSNAINSDSNPEHVKQTTPKSNKSIKRRLTSTDANELKRRKSVCKKEYTSEQLETAINDIKSGCSLLEASVKNGIPRSTLYMRTKALGIPLSTSRSDYTLEDMRAAIQYVIEGSSLQQAADCYGIPKTVLWRRIQKEGHEIKNKRETRKNYGDERRLAAVKALERGDSLTKVANEYKIPKTTLFRDKARLVDQGKLPSTFWKRRKSEGEKQKYSRLAEAVAACKDGTMSQASASAHYKIPKTTIWRRLQKELAKSSSPTKSPKKKTEPLKKKTLIKSEEFNEDDFEAYCPDEAEMNITYINEENLSEDPVIILAGEDTEELNRQSYVVVHEGSSEENLISLEYDSIR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00073887;
90% Identity: iTF_00073887;
80% Identity: iTF_00073887;