Basic Information

Gene Symbol
ARID4B
Assembly
GCA_030522585.1
Location
JAPYYQ010000083.1:53229-60918[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.2e-27 1.1e-23 84.3 0.1 2 89 316 402 315 402 0.95
2 2 1.4 6.9e+03 -1.6 0.1 66 84 1105 1124 1097 1124 0.76

Sequence Information

Coding Sequence
ATGTCTTGTAATGTTTTGCAGGGGGACGATCCGCCTTATTTGTCGGTGGGCACCGAAGTCAGTGCCAAGTATAAGGGGGCCTTCTGCGAGGCTAAAATCAAAAAGGTCCAGCGATGTATCAAGTGCAGAGTGACTTACAAGCAGGGTCTTGGCCAGGCCACTGTTACCGACGATCAAATCAAGGGGACACTTAGAGTTGGTGCCCTGGTGGAGGCAAAGTATAGTGATAGGAAAGACTATGTTGAGGCAACTATCAATAAAATACAAGACTGCAGTCAATATACTGTTGTATTTGACGATGGTGACATCACTACCTTGAGGAGATCTGCATTGTGCTTGAAAAGCGGCAGGCATTTTGCAGAGAGTGAAACCTTGGATCAGTTACCTTTGACACATCCAGAGCACTTTGGCTATCCTGTTACTGGTGGCAGAGGACGTGGTAGAAGGTCAAGACAAAATCAaGATGGTAGTAGTGATGAAGATGACGATGATGGAGCTAGAGGCAGCAATGACTCTGGATCTGGTTCTGGAGGAAAAGATGAGCCTGAAAAAGAACCAGAAGTTGGAAAGGTAGTATGCGTGGAACTGAGTGTtgataagaagaagaaagacaaCTGGTTTCCTGGCTTAATTGTTTCACCAAATGCTCAGGATactgtaaaaattaatattcgaGATGAATACCTTGTCAGGTCCTTTAGAGATGCCAGATAttATACTGTGCCTAAAAAGGAAACAACTTCTTTCAATAAAGAATTAGGTGCTAAAGTTGAAAACAGTGCTTTAAAATCTGCAGTGGAAAAAGCCTTACAATATTTAGAGAAACATGAGTTGCCTGCCCACTGGGATAGAGATACATTGTTTGGAAATACAGTGTCTAGCGATAACAGCGACAGCGATGGAGACATTGATACGGCTAGTTCTGACGATGAACcacgagaagaaaaagatcACGTCgtggcaacgttgtataaatTTATGGATGATCGGGGTACACCCATAAATCAGTGCCCGATGATCGGAAACGAGGACATTGATCTCTACCGCCTTTTTCGCGCAGTCTACAAGCTTGGCGGCTTCAATCGCGTTACCAATCAAAATCAGTGGAAGTACATCACCAAACGACTTGGCTTCACAGTTCAAAACAATACCTCAACGCGCAATGCTGTCAAAAATTCATACAAGAAATACCTACATTCTTTTGAAGACTTTTATCGGAAATTAGGCTGCACGATGGTCAACCACCCTCGTGGAAGTATGAGAAAACAACGTCCTGGCCGCAGCTTAATAAGAGATAAAGATCGAACAGCTACTCCAAATCAAGATCAATTGGCTgttaaaacagaaaaagaagaagatgaaaaggaaaaaaagactgTTCTGATTCCGGAAGAGgaaattaaaaaggaaaaaataaaaaaggagttGACACCAAAAGAAGAGGAAGTACAGccgaaagtaaaaaggaaagaagaacTCACGGAAGAAGATGCAAGTGGCCAAGAAAGCGATGTTAACATTGATGCTGAAGAAGAGTCTTCCAGTAgtgaaaaatcacaaaaaagtacatCAAGACTGACTCCTTCAAGTACTATCAGTAACAAATCCAAAGCAATGGCGCCCGTTAAAGTTAAAGAAGAAGCTCCGAAAAAGAAACCGCCcgctgaaaagaaaaagcctgAGCCGAAGaagcaagagaaaaaggaacCGGAAAAAGTTAAAGAAGACGATAGTGCAAAAACAAGATCTAAATCGAAGGAAGACGTGACGAAAGGTGGCAAATCGAATTCTGAAGTGAGAGAAACGAGGACACCTTCCAGGGAATCAGAAAAGAAACCGATAGCTAAGCCGAGGAGATTGACGGATGATGAGTTGAAAAAACGTGGGCGTAAGAAAAAGGAGACTGAAGGtgagaaaggaaaaagctcGGACGAACGATCGGTCGAGTATGCACCGTTCTACAGAGGGTCAGTTGAAATCGGTGATAAGCTTAATGTATACTACGGGCCAACGCATGAGTCAAAAGTTACGTACGAAGCTAAAGTTATCGATATAACAAAGGATGGCTCTGAACCTTTGTATTTAGTTCACTATACTGGATGGAATACTAGGTACGATGAATGGATCAAATGCTCGCGGATAGCTCAAAACTACACCCAAAGCCAAGGCCGCATGAAGCGCACAAAAACAACTCCACGCCCGCAGACTCCCAGCACCAATTCCTCTTCTTCAAAGTCCATGAAGGGAGCTGCGCCAAATGCAGGAACTGGAGCATCTCCAGGATCAGCCCAGAATCGACGACGGGCCCAAGGAGACTCTTCTGGAGGTGGTGGTTCTGGACCTGGCAGGGACTTGCGGAAGGATGAGCGCGAGGCCACACCGACTACTCGCTCGATGACTCCTtcacctctcatctcgaacGCCCTGCGCACTAAGAGTCCTGCGTCGACGGCAAGCAATCGTTCGACGCGAGTCACTCGCAACGCTGACTCCGCGTCTTCGAGCGACATGGGCCGTCGACCGAGACGCTCATCGGGACTTACAGACGCAATTGCAGCCGAGGAGACCGAAACCGAAGACACGGATACACTTGAATCTGATGCGAGTGCCTCGACTCCTGTGCAATTTCGACCGCGTGTCAGGGCTGGTGCCCAGGAACGCAGTCGGAGGGAAGCAAGGCGTCGAGCTGAAAGTCGAATGAAAATCGAGGATACGAGCGATGCAGAGGCAGAAAAGGAGTGCGAGGAGCCAAGGCGAGGCAAGCGATTGAGAAAGGAGGAACCGCCTAAAGGTAGAGATTACGATTTGAACGAGATTAAAGCCGAGCTCAAAGGATATGATAAAACTGTCAAATTAGAAGTTGTAAGTGTAGGACCCGATGTAGACGAAGACGAAGATGAGCAACCTACCATTACCATCAaacaagaaaaagttgagCCAGAAAACGTAGTTGCAGAAAAGAAGATTGCACCAGAACCAGAAAAGAAACGTGAAGTTCCGAAAGTTGAACAACAAGTCGTTTCACCAATCAAACGAGAAATTAAAGTGGAACCAAGTCAGTCCGATAGCACTGATgatatttatgaatttaaagAGCCAGAACCTTTCGAATTTGAGGTGCGAAATAAACGAGACTCAGGGGGCAGTAACAATTCTaccgataaagaaaaagacaaagaaaagGATAAACCAAAAAAGCGTACTTTCGAGGATGAATCTAAGAGTCCGAAAAAGCGTCCAAAGGCCTTTAACGCAACAAGTACGACACCCGTAAAAACTACCGAGCAGCAAAAGTCAACGGATAATAGTCCTCCCGAGCAGCAAACAACAGTGGATGCTAAGAAAAAAGTTAGAAAGATATATAAGAAGAACGAAGAGGCAGAAGAAAGTGTAGACGCTGATTCGGAAGAACCCACTCGAGAAATCTCAAAGTTCTTCCCCTCGACTAACTACGCTAATGTCATGATGTACAAACGCAAGGGTAATTTTGCCGCTAACTCGAATGTGAAAGCAGCCGAAGATAGTTCTGTCGAAGATTCAAGTACGATTGCGAGCGTGATTGATAGCGTTGTAGAGGACAAGGATAAATTGAAACGAGTCGGGCAGGAGGATGATAAAAGTCCTAAAAAGCGGCAAGTAAAGACCTTCGGGGCTTCTGCTGCTACCACTGTTgttgctactactactaccactGTTGCCGCTGCGGCTACTACAGCTGCAACTGCCGCTAGTGCAATGAAAGTTAGTGAAATCAAGCCTAATGATACTTCGGTTACAGATGAGAATAAGAAGAAGCAGCGCAAGGTATTTGGGAAAAAGCCGGAAGAAGTAGAAAACAACATAGAAAATGATAACTCCAATAAAGACGTTAAGTTTTATCCTAGTTATGCTGCAACAAAAACTCAAATTCGCAAAGAAGATCCGGACGAGGCTTCGCAGGCTGAGGCgaaagaaaaaccaaaaaaaccTATCGAAGAAGAatctgtaaaaaatgtaaaaaagagaCAGAAGACTGTGGCAACTGTGGTCACTGGGAAGGCCGACGTCAATTCATCAGAAAATGtggaaacaaagaaaaaacccgtgaGAAAAGTTCCTGTCAAGAAGGTAGAGGATACTGAAGACACAAATGGCGATAGCGATGATATGGATGAAGTTATCATAACAAGTACTAAATACTTCTCACATTACTATGGGCCAAAGACGAAAGCAGCCGCAGCAAACAATGAAAATGATAGCTTGAAAGATCGCCGATCATCTCCAGCCGTTATAAAGCCTGAAGCTCAAGCAAATGAACCTTCAAAGCTTTCCATTCCGCCGAGCGTGACGAATGCTACTAAAGAAGatagcaaattaaaaattggagaGCAGGTACCATCGACATCTACGACTTTAGCATCGGAACAAAAGCAAACTCTCATTAATGTTGACAAGAAACGTGGCGCAGATTCTACAGTACCGAACAAGACTGAACCGAAATCCGAACTCAAGCCTTTGGACTTTATGCCAAGCGTTACACACTCCTTGACGGTGCCAGCGCCGCTAAGCGCTCGACTACCTGCGACTGCAAGTATTGAAGAGAAACTTTCTGCAGCAGCGGTATTCCGCAGTAAAATGAAGGACACGAAGAAGGACGAGGATTCAGAGACAACACCGGCCCTTGCCAGGAAGACTTTTAAAGATATGACGAAGAAAATCGAGTTAACGTCCATGAAAAAGGCGCAGAAAGATaaagaagaaagcaaaactaaACACGAGcccgagaagaagaagcagcaggagCCAACCGTTTTAAGGAAAGATATTCTTCCGGAAATCGAAGTGCGGAAAGATCCGTTACTAGAGGTAATTAAGAAAAAGGAGGATGACCTacttaaagttaaaaaagaacCGGAGCCCAAAACTAACATGATGCCAATGTCAACTACCATGGTTAGTGGGCCGAAGACCTATAGTAACCAGAAGAAAGAAACTGCGGCTAAGCTCGAAGAAGTGTGGAAGAAAGCGGCGGCAATGGCTTCTACGGTTATCAGTAGTAGCGACGTCGTTGCAAACAGTCTGTCGAGCAATGAAGCGGCCAAGGACTATCCTCCAGTGCGCAAGGAAACGATCGTTAACAAAATCAAGTCGTGCATAGACCGCGATTCGGTCGATTCGACCGACAGCAGCGATTCTGAAAGGCGGTTAACAATCATCGATAACGAGGACTTTGCCGATGAGAAGGGCAACGAATCTGGATCTGACGCTAAAGCCAACATAAAGCCCCCGTGCTCCGTTACGGTAAATCAATACAACAACGCTTCAGGTCCGCCTGAGATGGTTAGCGTGGTCACGAGTCATAATGAGGTGGCACAAGTTGTGGGTCTTATTGGTACGGCGATGCAGGTAAAAAGCGCCAAGATGGAAGAGGATGGCGAGAATCTCAATTCGTTGCTATGCGAAGAGGAAATTCCTGGATCACCAACGCCAGGCGTCGAGTCGATCGAGCCCGAACATCGATCGGCTAGTTCTCAAAATCTAGTCAAGACTGATATGGGTAGCAAAGTTGCCGTTGCTTTTGTTGCCGCTCAACTGCCTTTGAGTACTGTGCCATCGTCAACTCAGCTAACAAATTGTTTGGTAACGACAATGAGCGGGTCAGTACCTCAGAGTTCCAATCTCGTCACCGTGTCCATGGTTCAGCACGCAAGCGTACAGTCTTTgcgacagcagcagcctcaAATTCAAGTGCCAATATCTCAACTCCATCAGCCTCAGGCACAAGCTCAAGCCTTGGCCCAACTACATCAGCAAGcacatcaccagcagcagcagcaacaactcCAGCAACGCCAGCTagaacaacagcagcaaccaATCGCCGTTTTGGCAATGCAGCAACGCAGGGAGAGCAACGAAGCAGCTCCAGTCATGGACAATACGCCTCCTCGTACACCCGACTCCAGCATTTCGAATTTGTCGAGCTCACCTCGCAATGAACGAACTGGTGGCTCAACGCTTTCTTCTTCCGAAGACAACTCCAGCAAAACACATCGCGACAGCTCCGAGACCGAGAACGAAAACGCCATTGGTGCGCGTAAGCAAGGAGAGACCGATCTTGGCTCGTCTTCGCTTTCCACCCAGGAGCACCGAGTAAACGCCGGGGCTTCTTCCTCCGTCGATCGAGCGGGCAAAACACCGCCTAAACGATTGAGCACCGATACAAACGACGGTGCGACATCTCCTAAGAAACGCAAGAAGCGAAAAGAATCGGACAATGGCAGTGGTAGTTCTACCCAGGCAGGTTCGAGCAACGCTTCATTATCGGGGAAGAAATCTCCTAGGCAAGGCTTGCGCAAGCAAACGGGTAGTGATAGCGACGACGATCCAAGGGACAGCATAAATACCGCATCGGTTAACAACAATAGCCATTCCGGGCCAACGCCGGGGCCATTAGTTCCAAAACACGCTGCGAACATCCCAGTTGCGTCGGTCGCTGCGGCAGTGGCAATTAATGGAGCATCAATGGCAACACCTCTCATAGCTTCGGCTGCGCCTACTTCGACTAATAGCAATACAGACTGGGACTGGGAATATAGGCCTCGGTCGAGATACAATTTCCTACCTGAATTGGGTCCACATTTGAGCCATGCCGAGAGGATAGCCATTATGTACAGTCGTGCAAACGATGCAAGGAAAGCTTACAGCATGGAGCAAACGAACATGAACCGAATAAACAAgcacttgaaaaaaatcaaacggaAAAAACGAGAAGCGCAAAGAGCAGCGATGATAGAAAGACAGCAGGATAAACTAATGGCTACGTGA
Protein Sequence
MSCNVLQGDDPPYLSVGTEVSAKYKGAFCEAKIKKVQRCIKCRVTYKQGLGQATVTDDQIKGTLRVGALVEAKYSDRKDYVEATINKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFAESETLDQLPLTHPEHFGYPVTGGRGRGRRSRQNQDGSSDEDDDDGARGSNDSGSGSGGKDEPEKEPEVGKVVCVELSVDKKKKDNWFPGLIVSPNAQDTVKINIRDEYLVRSFRDARYYTVPKKETTSFNKELGAKVENSALKSAVEKALQYLEKHELPAHWDRDTLFGNTVSSDNSDSDGDIDTASSDDEPREEKDHVVATLYKFMDDRGTPINQCPMIGNEDIDLYRLFRAVYKLGGFNRVTNQNQWKYITKRLGFTVQNNTSTRNAVKNSYKKYLHSFEDFYRKLGCTMVNHPRGSMRKQRPGRSLIRDKDRTATPNQDQLAVKTEKEEDEKEKKTVLIPEEEIKKEKIKKELTPKEEEVQPKVKRKEELTEEDASGQESDVNIDAEEESSSSEKSQKSTSRLTPSSTISNKSKAMAPVKVKEEAPKKKPPAEKKKPEPKKQEKKEPEKVKEDDSAKTRSKSKEDVTKGGKSNSEVRETRTPSRESEKKPIAKPRRLTDDELKKRGRKKKETEGEKGKSSDERSVEYAPFYRGSVEIGDKLNVYYGPTHESKVTYEAKVIDITKDGSEPLYLVHYTGWNTRYDEWIKCSRIAQNYTQSQGRMKRTKTTPRPQTPSTNSSSSKSMKGAAPNAGTGASPGSAQNRRRAQGDSSGGGGSGPGRDLRKDEREATPTTRSMTPSPLISNALRTKSPASTASNRSTRVTRNADSASSSDMGRRPRRSSGLTDAIAAEETETEDTDTLESDASASTPVQFRPRVRAGAQERSRREARRRAESRMKIEDTSDAEAEKECEEPRRGKRLRKEEPPKGRDYDLNEIKAELKGYDKTVKLEVVSVGPDVDEDEDEQPTITIKQEKVEPENVVAEKKIAPEPEKKREVPKVEQQVVSPIKREIKVEPSQSDSTDDIYEFKEPEPFEFEVRNKRDSGGSNNSTDKEKDKEKDKPKKRTFEDESKSPKKRPKAFNATSTTPVKTTEQQKSTDNSPPEQQTTVDAKKKVRKIYKKNEEAEESVDADSEEPTREISKFFPSTNYANVMMYKRKGNFAANSNVKAAEDSSVEDSSTIASVIDSVVEDKDKLKRVGQEDDKSPKKRQVKTFGASAATTVVATTTTTVAAAATTAATAASAMKVSEIKPNDTSVTDENKKKQRKVFGKKPEEVENNIENDNSNKDVKFYPSYAATKTQIRKEDPDEASQAEAKEKPKKPIEEESVKNVKKRQKTVATVVTGKADVNSSENVETKKKPVRKVPVKKVEDTEDTNGDSDDMDEVIITSTKYFSHYYGPKTKAAAANNENDSLKDRRSSPAVIKPEAQANEPSKLSIPPSVTNATKEDSKLKIGEQVPSTSTTLASEQKQTLINVDKKRGADSTVPNKTEPKSELKPLDFMPSVTHSLTVPAPLSARLPATASIEEKLSAAAVFRSKMKDTKKDEDSETTPALARKTFKDMTKKIELTSMKKAQKDKEESKTKHEPEKKKQQEPTVLRKDILPEIEVRKDPLLEVIKKKEDDLLKVKKEPEPKTNMMPMSTTMVSGPKTYSNQKKETAAKLEEVWKKAAAMASTVISSSDVVANSLSSNEAAKDYPPVRKETIVNKIKSCIDRDSVDSTDSSDSERRLTIIDNEDFADEKGNESGSDAKANIKPPCSVTVNQYNNASGPPEMVSVVTSHNEVAQVVGLIGTAMQVKSAKMEEDGENLNSLLCEEEIPGSPTPGVESIEPEHRSASSQNLVKTDMGSKVAVAFVAAQLPLSTVPSSTQLTNCLVTTMSGSVPQSSNLVTVSMVQHASVQSLRQQQPQIQVPISQLHQPQAQAQALAQLHQQAHHQQQQQQLQQRQLEQQQQPIAVLAMQQRRESNEAAPVMDNTPPRTPDSSISNLSSSPRNERTGGSTLSSSEDNSSKTHRDSSETENENAIGARKQGETDLGSSSLSTQEHRVNAGASSSVDRAGKTPPKRLSTDTNDGATSPKKRKKRKESDNGSGSSTQAGSSNASLSGKKSPRQGLRKQTGSDSDDDPRDSINTASVNNNSHSGPTPGPLVPKHAANIPVASVAAAVAINGASMATPLIASAAPTSTNSNTDWDWEYRPRSRYNFLPELGPHLSHAERIAIMYSRANDARKAYSMEQTNMNRINKHLKKIKRKKREAQRAAMIERQQDKLMAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-