Atra006482.1
Basic Information
- Insect
- Amyelois transitella
- Gene Symbol
- Zmiz1
- Assembly
- GCA_032362555.1
- Location
- CM063556.1:3939500-3943212[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.11 9.9e+02 0.2 0.9 4 24 387 407 384 412 0.88 2 2 9.8e-26 9.1e-22 77.2 4.6 1 50 470 519 470 519 0.98
Sequence Information
- Coding Sequence
- ATGAGCGGCGGCGGCGAGAACGCGCAGTTCGGCGCCACCGCCGCAATGGTCGCCGCGGCCACCACGGCCGCGATGCAGGACTCGCAGCCATTTGGCCAGaTGCAAAACAACATGACTATGGGAAATCCCCAATATGGCGCGATGAACGGCTACGGCCAGCAGCGCAGTCATAACCCAGCCATGAATGGCATGGGAATGGGAGGAAACGGTGGAATGAATGGTATGACCGGAATGAGTCAGATGAGCAACGCCGGAATGAACGGCATGAACGGTATGAATCCCATGGCGCAGATGGCGAATATGGGTATGCACGCAAATATGATGCCCTCGCAAATGGGTCCTGGCCAAATGGGCGGCTCGGCAAAAATGGGACCTGGGTACCAGAGACGACACACGCCATACCCGTCTGGAACCATGCTAATGAGCCAGAGAAAAACTCAATACATGGGTGGTCAGCCGGGCTTCGGCCCAGGGCAATACCCAGCGGGATACGGGGGCAGACCGGGCTTCCAGGGTCAATACCCTCCACAACAACCATTAGGCCCTTCTGGAAACTTTGGAGCATCTATGAGAGGAAGCATGAGGCAAACCACACCGCCGTACACAAACCAAGGACAGTACTTCAACGGTGGTGTGCCAAACCAATTTCCTCAACACCAAGGAAATAATGCACAGTACGGTGGTCAATACAGTGGACAATTTGCGCAGGAAGTAGCTATGCGCACTAATATGAGCTACCAACACAGTCCAGTTCCTGGTAACCCCACACCGCCTCTTACGCCAGCAAGTAGTATGCCGCCATATATTAGTCCTAACGCTGACGTAAAACCTCACTTCAACGACCTCAAACCACCGATGGGCATGCAAAATGATGAGCTCCGGTTAACATTCCCCGTAAGAGATGGTATTATACTGCCACCATTTAGATTAGAACATAATTTAGCCGTTAGCAATCATGTATTCCAATTAAAACCCACGGTCCATTCAACATTAATATGGAGGTCGGACCTTGAGTTACAACTTAAATGCTTCCATCATGAGGATCGACAAATGAATACGAACTGGCCAGCAAGTGTTCAAGTGTCAGTTAACGCAACGCCATTAGTCATAGATAGAGGCGAGAACAAAACATCACACAAACCGTTGTACCTGAAAGAAGTGTGCCAGCCAGGCAGAAACACCATACAGATCACCGTCTCAGCCTGTTGTTGTtcACATCTATTTGTACTACAGTTAGTCCACCGACCGAGCGTCCGAAGTGTCCTCCAAGGACTATTACGGAAGAGATTGCTAACAGCAGATCACTGCATTGCCAAAATAAAGATGAACTTCAACCAAACGCCGGCAAATAATAATGGTTCCAACACGGGTAACGATAGGGACAGTGTGGAACAAACCGCATTAAAAGTATCGTTAAAATGTCCTATTACCTTCAAGAAAATCACATTACCAGCACGCGGGCATGAATGCAAACACATACAATGTTTCGATTTAGAATCCTACTTACAACTCAATTGTGAAAGAGGTTCATGGAGATGTCCTGTTTGCAATAAACCAGCGCAGTTAGAAGGCCTAGAAGTAGATCAGTATATGTGGGGGATTCTCAACACGTTAAATAGTTCTGACGTTGATGAAGTAACCATTGATAATGGCGCTAATTGGAAAGCGgctaaaagtcaatcaagttcTGGAATCAAGcagGAAGACGATAGCAATGATAACAGCGTAGGAAAACGTGGCAAGGCAGTTTCGCCGGGTTCAATGAATATGCCAACGATGAATAACTGGGACATGAACCAAGCGTTGTCGCCTTACCTCCCACCGGATATGAACACCATTGCAAGTGGCTCCATGATCTCATCGTACAACCAAAGTGGGCAGAATAGGAACTCTGGGTCCAACAGCCAGAACTACGATTTCGGGATGAACAATGGCCCTGGGAGCAACGAGTTCGCGGGCAACGGCCCACTGTCACACCTCAATGACAGCGTCAATTCGTTGGATCCACTTAACGCGATGGAGAAAAGTCTCAATGAACAGATGCCGCATACACCACACACACCTCACACCCCCGGGTCAGCTCACACGCCCGGAGGCGGTGGTGGCGCGCACACTCCTGGTTCCTCCCACACGCCGGGCCCGCCGTCTGTTGGACATCACAGTCTCAACGAGGTAGACATCCCGGGAGATCTCAATTTCGATCCTGCTGCCGTGATCGATGGCGAAGGCACAGATAATCTCAATCTGTTGCCAGAAACAAGCGTGGATCCCATGGAGTTGCTCTCGTATTTGGATGCACCAGCCCTGGGTGAGTTACTAGCCACGCCGCCTTCATCATCATCGTCTGCTGGATCACATCCTCCACGAGCGCCATCATCCGACGATTTGCTGGCGTTATTCGAATAA
- Protein Sequence
- MSGGGENAQFGATAAMVAAATTAAMQDSQPFGQMQNNMTMGNPQYGAMNGYGQQRSHNPAMNGMGMGGNGGMNGMTGMSQMSNAGMNGMNGMNPMAQMANMGMHANMMPSQMGPGQMGGSAKMGPGYQRRHTPYPSGTMLMSQRKTQYMGGQPGFGPGQYPAGYGGRPGFQGQYPPQQPLGPSGNFGASMRGSMRQTTPPYTNQGQYFNGGVPNQFPQHQGNNAQYGGQYSGQFAQEVAMRTNMSYQHSPVPGNPTPPLTPASSMPPYISPNADVKPHFNDLKPPMGMQNDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVHSTLIWRSDLELQLKCFHHEDRQMNTNWPASVQVSVNATPLVIDRGENKTSHKPLYLKEVCQPGRNTIQITVSACCCSHLFVLQLVHRPSVRSVLQGLLRKRLLTADHCIAKIKMNFNQTPANNNGSNTGNDRDSVEQTALKVSLKCPITFKKITLPARGHECKHIQCFDLESYLQLNCERGSWRCPVCNKPAQLEGLEVDQYMWGILNTLNSSDVDEVTIDNGANWKAAKSQSSSGIKQEDDSNDNSVGKRGKAVSPGSMNMPTMNNWDMNQALSPYLPPDMNTIASGSMISSYNQSGQNRNSGSNSQNYDFGMNNGPGSNEFAGNGPLSHLNDSVNSLDPLNAMEKSLNEQMPHTPHTPHTPGSAHTPGGGGGAHTPGSSHTPGPPSVGHHSLNEVDIPGDLNFDPAAVIDGEGTDNLNLLPETSVDPMELLSYLDAPALGELLATPPSSSSSAGSHPPRAPSSDDLLALFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00112199;
- 90% Identity
- iTF_00319393; iTF_00448697; iTF_00383286; iTF_00621698; iTF_00771555; iTF_00412196; iTF_00723652; iTF_00777156; iTF_00248610; iTF_00247720; iTF_01183492; iTF_00208485; iTF_00209484; iTF_00213093; iTF_00429573; iTF_00720934; iTF_00146981; iTF_01091366; iTF_01562440; iTF_01194050; iTF_00359157; iTF_00358203; iTF_00120169; iTF_00236329; iTF_00006762; iTF_00959850; iTF_00959095; iTF_00960605; iTF_01437642; iTF_00762240; iTF_00078059; iTF_00428683; iTF_00463051; iTF_00156874; iTF_00818827; iTF_00056222; iTF_01430443; iTF_00277068; iTF_00788205; iTF_00291211; iTF_00362222; iTF_00874990; iTF_00876710; iTF_00924270; iTF_00663727; iTF_01510135; iTF_01010960; iTF_00859138; iTF_01429616; iTF_00716305; iTF_00782321; iTF_00778482; iTF_00777690; iTF_00791761; iTF_01221174; iTF_00010776; iTF_00009685; iTF_00781496; iTF_00833720; iTF_00819737; iTF_01134457; iTF_00125594; iTF_00745306; iTF_00910202; iTF_01488218; iTF_00824387; iTF_00678190; iTF_00795379; iTF_00115387; iTF_01316955; iTF_01317901; iTF_00697948; iTF_00926268; iTF_00185821; iTF_00149054; iTF_00706622; iTF_00702567; iTF_00776478; iTF_00458545; iTF_00281951; iTF_00318591; iTF_00709855; iTF_01125119; iTF_01126033; iTF_00737152;
- 80% Identity
- -