Atra000788.1
Basic Information
- Insect
- Amyelois transitella
- Gene Symbol
- CSRNP3_1
- Assembly
- GCA_032362555.1
- Location
- CM063549.1:10406580-10408826[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.19 5.4e+03 -2.3 5.7 59 109 32 87 16 110 0.45 2 3 3.5e-102 9.9e-98 327.0 5.9 2 218 222 430 221 430 0.93 3 3 0.58 1.6e+04 -3.9 0.9 38 85 637 685 633 715 0.40
Sequence Information
- Coding Sequence
- ATGGAAGGCCCGAGTAATGAATTGTCTGAGCGCATTCCAGAACTAGAACCAAATtgcaataatgaaaatattccAGAAGCAGAAGAAGTGAAAAATGAACAAGAAACATTTTCTGtgaaagaagaaaaagttaGTGATAGTGACACTAATAGTGATGATCTAAATTCTAACGATGAACAAAGCAATGTAAATAGCAATAGCAACTCTCAGTTTTATGAGAGCAGTGATAGTAAACTAGATTATGCTGTTAAGATGGACGATAGTGATACTTTAAGTGATATAGAAGATATTAAAACAGATACTGCATCTGCGGATAGTGAAGACTCAGCACTAGGCAGTTTACCTCCGGATGGAAATCCAAACGATAGAGAAGAGGATGCTCAGGATCGGTTGGATGGCAGTGACTCAGGTCTTGGATCGGAAACAAATGATGATTCCAAATTACCTAGTTTCAATCTTGCTCTACCATGTGCAAGTACTAGTGAAGATAGCTCTTCTTACAGTATAGATCAGAATAAAGAAAGCCTAAATGAGATTAATTTAGATAACAATCCAGAATGTAGTAGCAAAGAATGTACGAACTCCGAACTTAAGAAACCCATTAGAAGTAGtcttaaaagaaaaagagaagATGATAGTGCTGAAGAACCACAAGTTAAGAGAAAAAAGGGAAGtataaaatttgataatgtAACTGTCTACTATTTTCCCCGAGCCCAAGGTTTTTCTTGCGTTCCATCTCAAGGTGGCTCTACTTTAGGAATGGAATGGGTACATACACATTCTCAGAATTTCACGCTATCAGAACATGCTTTAGAACAGAGAAGACTTCacagacagattttacaacagcTTAAAAGTGAACGGCACTCCATCCAAGGAACGTCTCTTTCGTCAAGTGAAGATAGTGATTCTGAAGAAGAAGCTAGCGATATATCTGAATCAGAGCTAGATTTGGATAGCTACTACTTTTTACAACCTATTCCTACTCGACAGAGGAGAGCGCTTTTACGAGGGGCAGGGGTTCGTAAAATAGAAGCTTATGAGAAAGATGAATGTAGAGATATTAGAACTTCTCGAGAATTCTGCGGATGTGCCTGCAAAGGAGTATGCAATCCTGACAATTGCTCTTGTAGTTTGGGCGGTATAAAATGTCAAGTTGATAGATTAAACTTTCCTTGTGGATGCACAAGAGATGGATGTGGGAATACAACTGGACGAATAGAATTCAATCCTGTAAGAGTACGAACCCATTTCATTCATACGCTTATGAGAATTGGTCTTGAAAAgcaaaaagaagaaagtgaagcAGCTGCTAAAAAGCAATGGGCTGAATCGCAAAATGCTAGTACCAGTTCTTGCGGGGCAAATAATTCATATGAAAGGGAGCGTTGTATGAGTCATGAGGATGGAATGTTGCGAGATGTTAATCTCACGCCAAGAGTGGAAGTCGAATCCTGCGTTAATTCAGGGAGTTTTAATAATGTTCATTGTGATATGAATAATATAGCACCACGGGGTAACATGCAGGAAAATGTTGCGTATGGTTATTCTAATGATAATTTAAACCATAGGAATGTACATGATAATAATGTAATGCACTATGACAACGGCAACAATCATCACGGCCACGGTGTTCCTTACACGTCTAGCATGCTACAAGGGAAAGGACCACCCTATTCTAACACGATGGGCTTTAACACTTTATCAAACAATATGCAAAGATATCCCTGTGAAATGAATTACTCGTATGATCAACACACAGATAATCACCATTTCAAGGGGTCACAAAGTTATTCCGCTTCAAGTTTTGAGGAATTCGCTCACAATTCTCAAATGTCTATGTTCAGTCATTACGGCCATATGTATGTTCCGGATTATTTACACAAACCGAACTCGAGCGGGAACGAGCATAACTCACTACAACAATATCACACGATGCCGCAGAATCACTACGAATCCTACAAGAATCCTGAATGTGTGACTGCGGAAAACAAAGACGCTCAATATACTACGCTGATGACATTGCCATATCAAAATAGCAATAAGTTACAAACAGTGGAAAACGATCAGAACTGGTTCAGTCACAACACGTTGCTGAACCTGGACCATTCCGACCATGCGACGCAGGACGCCACTGAGCTGCCGGCTCAGCCCGCCGCCCCGGCAGAGCCCACGACCTCGGAACCTACCGAAAACTTCGGGGagctaattaaaaaaactatggTAGAGTCTGTTACTGTGTAG
- Protein Sequence
- MEGPSNELSERIPELEPNCNNENIPEAEEVKNEQETFSVKEEKVSDSDTNSDDLNSNDEQSNVNSNSNSQFYESSDSKLDYAVKMDDSDTLSDIEDIKTDTASADSEDSALGSLPPDGNPNDREEDAQDRLDGSDSGLGSETNDDSKLPSFNLALPCASTSEDSSSYSIDQNKESLNEINLDNNPECSSKECTNSELKKPIRSSLKRKREDDSAEEPQVKRKKGSIKFDNVTVYYFPRAQGFSCVPSQGGSTLGMEWVHTHSQNFTLSEHALEQRRLHRQILQQLKSERHSIQGTSLSSSEDSDSEEEASDISESELDLDSYYFLQPIPTRQRRALLRGAGVRKIEAYEKDECRDIRTSREFCGCACKGVCNPDNCSCSLGGIKCQVDRLNFPCGCTRDGCGNTTGRIEFNPVRVRTHFIHTLMRIGLEKQKEESEAAAKKQWAESQNASTSSCGANNSYERERCMSHEDGMLRDVNLTPRVEVESCVNSGSFNNVHCDMNNIAPRGNMQENVAYGYSNDNLNHRNVHDNNVMHYDNGNNHHGHGVPYTSSMLQGKGPPYSNTMGFNTLSNNMQRYPCEMNYSYDQHTDNHHFKGSQSYSASSFEEFAHNSQMSMFSHYGHMYVPDYLHKPNSSGNEHNSLQQYHTMPQNHYESYKNPECVTAENKDAQYTTLMTLPYQNSNKLQTVENDQNWFSHNTLLNLDHSDHATQDATELPAQPAAPAEPTTSEPTENFGELIKKTMVESVTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01220665;
- 90% Identity
- -
- 80% Identity
- -