Atra015786.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Amyelois transitella
Gene Symbol
ct
Assembly
GCA_032362555.1
Location
CM063569.1:908372-912809[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.4e-32 3.7e-28 97.9 0.0 4 77 352 426 350 428 0.96
2 2 7.7e-31 5.4e-27 94.2 0.0 3 75 552 625 550 629 0.95

Sequence Information

Coding Sequence
ATGGAAGCGTTTATGATCTTTCTAAATAAAGCAGGTCAATTTATTGTTTCCGTTGGGGTGGAATATAAATGTTTGGACATCAAAGATTCTCCTGAAACCTCGGTTGGCACAAAAGATGGCACCCTTGGCCCCGGGTTCGGGAGGTCGGAAGGCGAGGGCGACGACCGCCTGGCTCACATCCTGAACGAAGCCTCTCATCTCATGAAGCCCTCTCAACCCAACAACGATGACTCTAGAAGCAACGAGGACTCCAGCTCCCCCAGGACGCAATGCCAATCGCCATATTCCAAGGACTCGAGCCAGAACAGAAGACTGAAGAAGTATGAGAACGACGACATTCCTCAGGAGAAGGTGGTGCGGATCTACCAGGAGGAGCTGGCCAAGATCATGACGCGGAGGGTGGAGGACATGAGGCACAGTCGCGATGGCTTCCCTGGCATGTTCCCACCTTTTTTCAGCGGCGGGATGCCCCCACACATGGAGCGGCCGCCCGAGGACATCCGCCTGGCGCTGGAGGCCTACCACCGGGAGCTCGCGAAGCTGCAGCCCCAGGGGAACATCCCCAACCTGCACAACCTGCCCGGGATGCCGCCCTTCCCCAACCTCCTCGCGCTGCAGCAGCAAGCCATGCAGCAAGCCCAGAACCAACACATGAACGGCTCTGGCGCAGTCCAGGATCTCTCCCTGCCTAAAGACAAAAACGCCAAAATGAATGGAATGACTGATAGTGATAAGGATAGGCCGATAGACGCCGAAGAGGCTATAAGGCACGCGGGCAGCGCTTTCTCGTTAGTGAGGCCAAAATTAGAACCGGGACAGCAGTCGACGGGGTCTTCCGCGTCGAGTCCGCTGGGAAACGCGATTTTACCTCCGGCGATAACGCCGAACGATGACTTCAGTAGTTCCGCAGCGGCGAGTCCCTTGCAGAGGATGGCTTCGATCACGAACAGCCTCATTTCTCAGCCGACGAACCCCACTCATCACGCGCCACCGCAGCGCTCGATGAAAGCTGTTCTTCCGCCAATAACTCAGCAGCAGTTTGATCTCTTTAACAATTTGAATACTGAGGATATAGTGAGAAGAGTGAAGGAAGCGTTGAGTCAGTACTCGATCAGTCAGAGACTGTTTGGAGAGTCGGTGTTAGGACTGTCTCAGGGTTCAGTGAGTGACCTGTTGGCGAGGCCCAAGCCCTGGCACATGCTGACGCAGAAAGGCCGGGAGCCGTTCATCAGGATGAAGATGTTCTTGGAAGACGACAACGCTGTGCACAAGCTGGTCGCGTCGCAGTACAAAATCGCGCCCGAGAAGCTGATGAGGACCGGGAACTACAGTGGAGCGCCTCCCTGCCCACCCAACATGAACAAGCCCATGGCGCCGGCGCAGAAGATGCTGTCGGAGGCGGGGTCGCTGCTCAGCAAGATGCAGCAGGAGCAGCTGCTGGGCGGCGCGCACCTGCCGCACCTGCCGCAGCCCGCGCCGCTGCTGCTGACGCCGCCCGGCTTCCCGCCGCACCACGCCGTGGCGCTGCCGCCGCAGCCCGACAAGGAGCGCaagccgccgcccgcgccgcaccCGCACCCGCACCCGCACCCCGCCATGCGCAACCTGCACCACCACATGTCCCCCAGCGTCTACGAGATGGCCGCCCTCACGCAGGACCTCGACACGCAGACTATCACAACCAAGATCAAGGAGGCTCTCCTCGCGAACAACATCGGACAGAAGATCTTCGGAGAAGCCGTGCTCGGCCTCTCGCAAGGATCCGTCAGCGAGCTGCTATCCAAGCCTAAACCCTGGCACATGCTCAGCATCAAAGGCAGGGAACCGTTCATAAGGATGCAGCTGTGGCTCAGCGACGCTCACAATATTGACCGACTCCAAGCGCTGAAGAATGAGAGGCGTGAGGCCAACAAGCGGCGGCGATCCAGCGGACCAGGACAGGACAATTCCTCTGACACGTCCTCCAATGACACTTCAGAGTTCTACCACTCGAGCTCGCCCGGACCCACCTCGGGAGTCCCATCAGCGAAGAAGCAGAGAGTCCTGTTTTCTGAGGAGCAAAAAGAAGCGTTGAGGCTAGCGTTCGCGCTCGACCCCTACCCCAACATGCCCACTATAGAATTCCTAGCGGGAGAATTGAGTTTATCGACAAGAACGATCACGAACTGGTTCCACAACCACCGCATGCGATTAAAGCAGCAGGCGCCGCACGGTCTGCCCGCGGAGCCGCCGGCGAGAGACCAGTCCACGGCGCCCTTCGAGCCGGTCCAGTTCAGGTTGCTGTTGAACCAGAGACTGCTGGAACTGCAGAAAGAAAGGATGGGTCTCGCAGGAGTTCCTCTTCCGTATCCTCCATACTTCGCTGCGAATACCAACCTGGCCGCGTTAATAGGTCGCGGCCTGGTCCCACCCGACGAAAGAGTGAAAGACCAGATCGGCGGGCTGGACCTGTCGATGCCTCTGAAGCGAGAGCCGGACGGCGACGACTTCGAGGACGACGATGTCGAGAGCAACCTCGGGTCGGACGACTCGCTGGACGACGGGGAATCCAAGACGGAGCCCAAAGCGGCGTCGACGCCGGCCGGCCGCTCCAACCGGCGGAAACCCGCCGCGCCGCAGTGGGTCAACCCGGACTGGCAGGACGAGAAGCCGCGGAACCCTGACGAGGTGATCATCAATGGGGTTTGCGTGATGAGGAGCGACGACTTCAGAAGAGAGGCGGAGGAAACGGTGCGAGTGGAGCCGGCGCCCGTGGCCCGCGGCGCCTCCCCCACCTCCCCGGCGCCCCGCACCCCCCACACCCCTCACACTCCTCATACACCCCACACTCCCCACACGCCGCACACGCCGAGAGCCACACACACCCCGGAGGATGTCCTCCCGGAAGACAAAATCAAAACGGAAAACGACGACGACCGATGGGAATATTGA
Protein Sequence
MEAFMIFLNKAGQFIVSVGVEYKCLDIKDSPETSVGTKDGTLGPGFGRSEGEGDDRLAHILNEASHLMKPSQPNNDDSRSNEDSSSPRTQCQSPYSKDSSQNRRLKKYENDDIPQEKVVRIYQEELAKIMTRRVEDMRHSRDGFPGMFPPFFSGGMPPHMERPPEDIRLALEAYHRELAKLQPQGNIPNLHNLPGMPPFPNLLALQQQAMQQAQNQHMNGSGAVQDLSLPKDKNAKMNGMTDSDKDRPIDAEEAIRHAGSAFSLVRPKLEPGQQSTGSSASSPLGNAILPPAITPNDDFSSSAAASPLQRMASITNSLISQPTNPTHHAPPQRSMKAVLPPITQQQFDLFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGAPPCPPNMNKPMAPAQKMLSEAGSLLSKMQQEQLLGGAHLPHLPQPAPLLLTPPGFPPHHAVALPPQPDKERKPPPAPHPHPHPHPAMRNLHHHMSPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGQDNSSDTSSNDTSEFYHSSSPGPTSGVPSAKKQRVLFSEEQKEALRLAFALDPYPNMPTIEFLAGELSLSTRTITNWFHNHRMRLKQQAPHGLPAEPPARDQSTAPFEPVQFRLLLNQRLLELQKERMGLAGVPLPYPPYFAANTNLAALIGRGLVPPDERVKDQIGGLDLSMPLKREPDGDDFEDDDVESNLGSDDSLDDGESKTEPKAASTPAGRSNRRKPAAPQWVNPDWQDEKPRNPDEVIINGVCVMRSDDFRREAEETVRVEPAPVARGASPTSPAPRTPHTPHTPHTPHTPHTPHTPRATHTPEDVLPEDKIKTENDDDRWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00947788;
90% Identity
iTF_00947788;
80% Identity
iTF_00072626;