Atra006023.4
Basic Information
- Insect
- Amyelois transitella
- Gene Symbol
- kn
- Assembly
- GCA_032362555.1
- Location
- CM063555.1:7725185-7735940[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-122 2.7e-118 396.4 0.0 205 387 1 201 1 206 0.99 2 2 2.4e-08 0.00013 21.0 2.5 420 469 210 261 202 306 0.82
Sequence Information
- Coding Sequence
- ATGAGAAGGTTtcaaGTGGTGATATCAACTCAAGTGATGGTAGACGGGCCTCTTTTAGCGATATCAGACAACATGTTCGTTCACAACAACAGCAAGCACGGCCGAAGAGCGAAGCGACTAGACCCCACTGAAGGTATTGACGCCGCCGCTGAACATACTTCAGGTCTATACCCACCTTTACCTGTAGCAACACCTTGCATCAAAGCGATATCACCGAGTGAGGGCTGGACGTCAGGGGGCTCAACCGTTATCATTGTGGGCGACAACTTCTTTGATGGGCTACAGGTTGTGTTCGGGACTATGTTAGTTTGGAGTGAGCTAATAACATCACACGCCATAAGAGTTCAGACGCCACCGAGACACATACCAGGCGTGGTGGAGGTGACGCTGTCCTACAAGAGCAAGCAGTTCTGCAAGGGCGCACCAGGGAGATTTGTTTATGTTTCAGCGCTCAACGAGCCCACGATCGACTACGGCTTCCAAAGACTGCAGAAACTCATACCGAGGCATCCGGGCGATCCGGAAAAATTACCTAaggaaataattttaaaaagggcAGCAGACCTTGCAGAGGCATTATACTCGATGCCTCGGAACAACCAACTGGGCTTAGGAGCGCCTCGATCCCCGCCAGCGAGTATGCCCTTCAACTCTTACACCGGCCAGCTCGCCGTCAGCGTTCAGgataccgctgcgtcacagtgGACTGAAGAGGAGTACGCTCGTAGTGGCGGGTCGGTCTCGCCGCGGTACTGCTCCGCCGCGTCCACGCCGCACGCCGCGACCGCCTCCTACCCCCACCCTCAACACTATCCAGCGCCACCGACATCACTCTTCAACACTTCTTCTCTGTCTCTCGGCCCGTATCACCCTGCGAACATGAATGGACATTTACCGTCTGACCATCAGTATAACGCGTATAATACGAAAGATAGCGGACATTACAGTGAAAGAAATGGGAGTTCTAAAGAGGCCGACTGTCCAGCAAACAGTCATACAAAATGCAATGGCAGCGATATGAAAGGGCCGGGCAGAGACGGGAAACTGAGAAGCGCCTTTGCCGTAGTGAGAAACAGCCCGCCAAGGAGTTATCTGAATCTCTTAAGAGGTTGCGAGTGTCCATATTGTATGTCATTCCTATTATTAATGCCCAGGTATTTTTCACCAGGAATGGGAGGTCTCGTCTCGTCTCCTTTCTCCGTAAACCCGTTCTCTTTGCCGACCTGCAGCGCCCAACAATACGCGCAGACAGCACCGCTGGCGTCCAAGTAA
- Protein Sequence
- MRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAAAEHTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAATASYPHPQHYPAPPTSLFNTSSLSLGPYHPANMNGHLPSDHQYNAYNTKDSGHYSERNGSSKEADCPANSHTKCNGSDMKGPGRDGKLRSAFAVVRNSPPRSYLNLLRGCECPYCMSFLLLMPRYFSPGMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00277115;
- 90% Identity
- iTF_00682157;
- 80% Identity
- -