Basic Information

Gene Symbol
-
Assembly
GCA_032362555.1
Location
CM063578.1:3986061-4002664[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-12 3.5e-09 37.5 0.1 4 89 254 326 251 326 0.88

Sequence Information

Coding Sequence
atgaaAGCACCAATGTGCACCGAGCCTTATCCCGGGGCGTTGCACCGAATAGATCCAGCTATCAATTCGTTGGCTTGTGTGCGCGCGCGCGTTAGTGTGCGTGTCACATGTCACGAGGTGCTAGCCATAAACGACAAGGTTGTACTACGCGCCGAGGACCTGCTGAGCTGGGTCTGCGATGGAGGCAGCTGGACGTGGGGCCTGAAGGCGGTCTGGCGAGGAGCGTGCGCCCCCCCGGCCGAGCCCAAGCACTCGGCGCCGCTGCACCACACCAAGATGGACTTCAGCGACATCGAGAAGGAGAAGAGCGCTATTGCCATAGATGCTGAATCGCCAGGAGTAGTGGTCTTCTCGTACCCAAGGTACTGCCGGTACAGAGCCCTGTTGTCCAGGCTGGAGGGGTTACAAGCTGATTGGCTGAGGGATTCTTTGGTGGCTGCATTGGGTGGCTACGCGGCTCCTACCAAAAATACGAGGATCTTATACTGTAAGGACACCTTCGAATATCCAGAATTGGAAGGCCACGAGTTCGTCTGCAACCATTTGGCGCCGCGTTTGAAGGGCAGACCTcgcggccgccgccgccgcccgccgcgctcGCGCAGCCAAAGCCAGGACGACTCGCGGGACAGTGACAGTGATGATGGGAAGCCTCAGCAGCTGCAGCCTACGATTCAGACCCCCCGCCGCCTGTCACTCCGCAACGGCGACAAGGCGAGCGAGGAAGAGGACGAGCGCAAGGATGATGGAGAAGATGGAGAGTTCCTCGACCAGCTGAAGAGGTTCTACCGGGACAGGAACCTGCAGCTCAGGGTCGGCGGCACCCTCAGAGACTTGTCCCTCCGAGCTGTTTACGAAGCGGTGAGATCTAACGGCGGCTACGAGGCGGTGTGTCGGCTCAAATTGTGGAGGACGTTGTTTGCTGAGCAGCCGGCGAGGACCAGGAGACACTATGAGAGATATCTCCTGTCGTACGAGACGCACGAACGGAAGCGTTCACGTCTCAACGGGAAGTGTTCCCCGCGGCCCGTGGCCACCATTGACGTCACGTCGTCTCCCCCGCACACCCCCGACGCGGTAGACAGCGACCTCAAAGAGGATTACAATGTTATTACCAAACCTGCCGAAGAGTTCAACAGGTCAATGGTCACTAACGACGTCACCCCCAAAGCGGTAGACAGCGACCTCAAAGAGGATTACAACGTTGTTAACAAACCTGCCGAGGAGTTTAACAGAGAATTCTTAGACTCGCTACCGAAGGACGAGAGGCCTGGCAAGATCTCGGTGAAACCCGTCGAGAAACTCGTCGACGCCGGCGTGAGGAAACTGTTCGAGGAACACCCGGTGAAGGCTGACGAGGAAGCGAAGAAGGACGGCCTCACGAGCGAGCTGGCGCAGAAACTTAACATGGGTACAGTGGAGAGTCAATCGCCCGCGGACGGCAGTTTGCTGAGATTGGCGTCACTCGGTGATAAATATGTCAACGGCCACGACCCACCGCCACCTGAacagCAAGCGAGCCGGCCGGCGGGGCGCAGCTCCCTGCGGCACGTGCGCGTGAAGCCCGCGAGGCCCCCAGCGCGCTCCACTCCCACGTCGATCGCTGGCCGCGCGGACTCGTCATCGTCGTCCCCCGCGCCCCCCGCTGTCCCCCCCGCAGCCCCCGCGGCCCCCCCCGCCGCGCCGCTCAACAACTTCGGCATTCATCACCCGCCCGCTCATAGCGCGCACAGCGATGATGAGATCGTTGAGGTTCCATACAAACCCAAAACGCCCGAGATAATAGACTTGGACGAGTACCCGGAGAGTCCGCAGGGGTTGAAAAAGAGAAAGTTGGATATATTAAAGGAGCGGGGCTTAGAGGTGACCGCTCTGCCGGGCGTGTGGCCCGCGCCGCCGCTGCTGGCGCGTGCGCAGCTGCTGCAGCTGTACGGCGCGCCGCTCGGCTACGACGGCGGACACCCGCCCCGCGTCATACAGGCCACCTCCATATTCGGCTCCGCCGGCCCCGAGAAGACCGTGTACGGGAACCCCAAAGACCCCTTCATGCCCCCCCCGCACATACTGCACGGAGCCCCGCTGAAGCCCCAAAAGAACGTGCCCACCTCCGATCAAACTCACGCGCCCGCCCGTCAAGATATACTAGATTTGACGTGCAACAAAAAATCTCCGTCGCCCGCGCTGAAACCGACGGTGGAAATCGTCAAAATACCAACGGCGCCGTCTGTGAACTCAGTGCAGAATCTGTCGAAGAATTACACGCTAGTGGACGGAAAAGCGGTGGTCGGTTCGAATCTCGAGATAACGCTGGTCAATCCGAAAGTTACGCCCACCAAGAGCAAAATACCGCAGAAGAGGTCGTCGAACGGCAAATTCGTTTCGTCCAAAACGACACCGCAGAAAGATTACAAGCCTGCTTCGTACGCTTGCCCCTCGCCGTCCGGTACACAACAAAAGAAACCGGCCATCAACGTGCCTAATTACCAAGTGCGCGATGAAGTGTCTCAAAATACCAGTTTGCAAACGAATTTGTTGAACGCTATGAAGAATCAGACGAGTTTGGCGCAAATCATCGAGATGCAGAAGAGCGTGGCGAGCGTTACGCCCTTCATGGACCCGGTGTACATGAGCGCGCTGTACGGCTCGCTGGGCCACGTGGGACAGATGGGACAGATGGACCAGAGGCAGCTGGCCGCGTACCGCGAGCTGGCGGGCCGCGGCTACCCGGGCGCGCTCAGCGGCACGCCCACCACGAAGCATTGA
Protein Sequence
MKAPMCTEPYPGALHRIDPAINSLACVRARVSVRVTCHEVLAINDKVVLRAEDLLSWVCDGGSWTWGLKAVWRGACAPPAEPKHSAPLHHTKMDFSDIEKEKSAIAIDAESPGVVVFSYPRYCRYRALLSRLEGLQADWLRDSLVAALGGYAAPTKNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRPPRSRSQSQDDSRDSDSDDGKPQQLQPTIQTPRRLSLRNGDKASEEEDERKDDGEDGEFLDQLKRFYRDRNLQLRVGGTLRDLSLRAVYEAVRSNGGYEAVCRLKLWRTLFAEQPARTRRHYERYLLSYETHERKRSRLNGKCSPRPVATIDVTSSPPHTPDAVDSDLKEDYNVITKPAEEFNRSMVTNDVTPKAVDSDLKEDYNVVNKPAEEFNREFLDSLPKDERPGKISVKPVEKLVDAGVRKLFEEHPVKADEEAKKDGLTSELAQKLNMGTVESQSPADGSLLRLASLGDKYVNGHDPPPPEQQASRPAGRSSLRHVRVKPARPPARSTPTSIAGRADSSSSSPAPPAVPPAAPAAPPAAPLNNFGIHHPPAHSAHSDDEIVEVPYKPKTPEIIDLDEYPESPQGLKKRKLDILKERGLEVTALPGVWPAPPLLARAQLLQLYGAPLGYDGGHPPRVIQATSIFGSAGPEKTVYGNPKDPFMPPPHILHGAPLKPQKNVPTSDQTHAPARQDILDLTCNKKSPSPALKPTVEIVKIPTAPSVNSVQNLSKNYTLVDGKAVVGSNLEITLVNPKVTPTKSKIPQKRSSNGKFVSSKTTPQKDYKPASYACPSPSGTQQKKPAINVPNYQVRDEVSQNTSLQTNLLNAMKNQTSLAQIIEMQKSVASVTPFMDPVYMSALYGSLGHVGQMGQMDQRQLAAYRELAGRGYPGALSGTPTTKH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-