Atra024329.1
Basic Information
- Insect
- Amyelois transitella
- Gene Symbol
- JMJ17
- Assembly
- GCA_032362555.1
- Location
- CM063580.1:12538104-12555942[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.3e-20 1.5e-16 61.2 0.0 6 89 984 1064 980 1064 0.93
Sequence Information
- Coding Sequence
- ATGCAAGGTCAAATGTCCGCAAAGTGggaTAAAGTGCAAGCGCAGCGTAAATTCGCTCAAGGCGCTTACATCCCGCCCCACCACAATAACAACGTCTCCGCCGAGCGGCGGTGCGAAGGTCATGAGAAGCCAGCGCCACCGCCCGCCATAGTTCAGAACATGTCCGCGGTGTCGCTACTGGACCAAGTTTCATTTCATAATTTACATTACCATGATCGCAAGATGCAGCCCGTGGTCCGCCTGGAGCGCTTGCCCCGGATTCAGCCCGACAGGACGCCCCGCATCCTCCGCAGGGTCTCAATCGCCACTGACTCCACCACCGCCATACCGCTGCTTTACCGCCGGCAGGTGTGGCCTCATAGCAAGCTGGGGTATGTGGACTTTTATTTACAGAACATGTATCCCACAGACCTTTGTTACAAAGACAGCAAGATCTACCTATGGTCCGCCTGGAGCGCTTGCCTCACAGACTCCACCACCGCCATACCGCTGCTTTACCGCCGGCAGGTGTGGCCTCACAGCAAGCTGGGGTATGTCGACTTTTATTTACAGAACCTGTATCCCACAGACCTTTGTTACAAAGACAGCAAGATCTACCTATGGTCCGCCTGGAGCGCTTGCCTCACAGACTCCACCACCGCCATACCGCTGCTTTACCGCCGGCAGGTGTGGCCTCACAGCAAGCTGGGGTATGTCGACTTTTATTTACAGAACCTGTATCCCACAGACCTTTGTTACAAAGACAGCAAGATCTACCTATGGTCCGCCTGGAGCGCTTGCCTCACAGACTCCACCACCGCCATACCGCTGCTTTACCGCCGGCAGGTGTGGCCTCATAGCAAGCTGGGGTATGTCGACTTTTATTCACTAAACCTGTATCCCACAGACCTTTGTTACAAAGACAGCAAGATCCACCTATGGTCCGCCTGGAGCGCTTGCCTCACAGACTCCACCACCGCCATACCGCTGCTTTACCGCCGGCAGGTGTGGCCTCACAGCAAGCTGGGGTATGTCGACTTTTATTTACAGAACATGTATCACACACACCAGTATTACAATGACCGCAAGATCTACCCATGGTCCGCCTGGAGCGCTTGCCTCACTGACTCCACCAACGCCATACCGGCAGATCAGACCACAGAGTTGCGAAACCGGGTgatcttaaagaaaaatccccgGCAATTGTCTAAGAAAAAGGTGTCCAGAAATCTGCGCACGCGACGCATGGTGACTAGACGAAAGAGGACCTGCTGCAGGGACGATACAGACACAGAAGATGAAACGCCTTTGAAATATCTAGCGGCCTCGTCACCACTAGACCCCCCGGGCAGGTCTTTCCCCAAGGATTCAGATGGTCCGTCGACGTCCAAAGACAGTTCGGGCTTCTACAGCGCTGATAACATCGAGCGGTGGATCAGCGGGGCTGCCCAGTCTACAAGTCAGTTCAAGgtgCCGCTGCCGCCGAGGCCCAAAGCGGCCAAGCATCCCGGTAGACAGTTTCAGAGGGACGAAATGCTAATGATACCAACGGTTGAAGACTCTATGGAGATCCCGGAGATCCCGCCTTCGCCCAGTAATGCTGGATGCGATAAGATTGAGCGCATGAGTCCCACCATATCCACGTCGTCTTGTTATCAACAAAACGATGATGAAGACCAAAAAGTGGAGCCCGAGTCTCTTGTAACCGTGGCCCCCTGTCCGTCCGAACGATACGTGACAATCAAAGATGTAGTCAATGCCTCCCAGGAGGAGCGAAAGTTGCGTTGCAGTATCTGTGATTTCTGCAAGAGGGCCTACAAGGTCGAGCAACTCTCGCAGGTGTTCAGGGAATCAGCCGACGACGGGGAAGCTTCCAACATGGTCATATGGCAGTCGAAGCCATCGCGGAGTAGCGACGACAAACAACAGACATCCAATTACGTCTATCTCGACATCCTGCCGGGCGTCAGCAATCTTGTCATCCAAATACAGTATACCGTGATTCCCAATCAAAAGAAACCCATTCTCCAAGCGCGTATTGTATCAAAATCCGAAGCTGAGTCAATCAATGAGTGCAATTTGATCGAGAACGAAAGCTTGTTCGAACAGCTCGTTGAATTTTTGGATGCGAAAATGCTGAAGCGATACAGGACGATCTTGTTAGACGCTCTAGCGGCTGAGAAGCGTTCGGCGGAAGGAGAGACGTCGCGACCGAAACGGAGTCGGCCAAAGTTGAAAGCTAAAATTACTAGAAAAGTTGCGGCGCGGGGCAAACCATACGATTTTAAATCTGCCGCGAAATTGACTAAGTTTTCTAGCAATTCGAACAAATATGTCGATAATTCGAGCAATTCCGCCGTCAATTCGAGCAAGTCCGCCGTCAATTCGAGCAAGTCTGCCGTCAGTTCGAGCAAGTCCGCCGTCAGTACGAGCAAATTCGCCGCCAGTACGAGCAAATCCGCCGTCAATTCGAGCAAGACCGCCGTCAATTCGACCAAGTCCGTCGTCAATTCGAGCAAGACCGTCGTCAATTCGAGCAAGTCCGTCGTCAATTCGAGCAAGTCCGCCGGCAATTCGAACAAATCATCGGCTAGTACCAGCAAATCCGGTGCGAATGTGGCGAGTCCGGGACCCGCTCCGGCCGTGGCCGGGCCCGCGGTGGGGGGGGCTCTGCCCGGGGCCAGCACGAGCGCGAGCCCCGCCGCCTTCCCCGAGACTCCGGCGGCCGAGAGGAAGCCCAGTGCGGCGGTGCGCGACGCCCCGGTCTATTATCCCACCGAGCAGGAATTCTGcGATCCCGTGGCGTACTTCGAAAAGATAATGCCGACGGCGAGCAAATTTGGCATCTGCAAGGTGGTTGCGCCTGCGTCGTTCAAGCCGAAATGTACAGTGAACGACAAGATAAGGTTCAACGTGGCCAACCAGTACGTGGCGCGGCTGTACACGCGTTGGGGGCCCGCCTCTCGGGAAATGTGCGCGATTAAGGCCCACCTAGCATCGCAAAGGGTGCCTTTTACGAGGTCGCCAATTCTGGACTCGTTGGAAGTGGACCTCCCGAAGTTGTACCACACGGTGCAGAAGCTAGGTGGTCTGAAGAAGGTGATCGAGAAGAAACTGTGGGGTCGGGTGGCGGAGAACATGCGGTTCTCCAAGAGACCACAGCTGGAGAAGAGACTGGACGACATTTACGTCAGATACCTGCTGCCCTACGATACTTTGTCAACTCAGGAGCGAGACGACATTAGGGCGGAGGTCAACAAAGGCTGGTACAAGAAGAACACCAAGATCGTCCGGCGTTCCTTGAACCCTCTGCACCGACAGAAGCAATTGCTCGGCGAGAGCGGCACTTCCGCTTCCGATACGGAGGACGAGTCCGATGTAGCCGGCGCTCTCACTGAAGCTGAGGACTGCATTGTCTCTGGTCGGAGGATGACCCTGGCTAATTTCATGAAGGTGGCCCAAGCGGTGAAAGACCAATATTTCCCCGACAACCCCGAGCCGACGCCTCGCGAAGTGGAGGACGAGTACTGGCGCATAGTACTACTGGCGCAGGAGCATATTTGTGTGAACACGGCCTCCATAGACACGGGGGAGGAGGGCTACGGGTTCCCGAAGGGCAAACAGGACCCTTACGGCAAGCATCCGTGGAATCCGAAGATGATATCCCAGAACCCTGGCAATGTGCTATCAATGCTGGGCCCCGTGCTGGGGGTGACTGTTCCCACTCTCCACCTGGGCATGATGTTCTCCACCAGCTGCTGGCACAGCGACCCCCACGGGCTGCCCTGGATTGAGTACATGCACAGCGGACCTGCCAAGATATGGTACGGTATTCCGGACGACCAGAGCGCCGCCTTCCGGGGCGCAGTGGAAAGTCTCTGCCAGACGTCCTGTCAGAACAAATCAATATGGCTGCCCTCGGACATCACAATGATACCGCCGCATTTCCTGCTTCTGAGCCAGGTGTCCCTGACCCGAGTGGAACAAAACCCCGGGGAGTACATCATAGTGTTCCCGAAGGCGTACTCCAGCTCCATATCGACTGGATACACCCAGTCTGAGAGCGTATACTTCGCCACCAACTCCTGGTTGAAGACAGTCGATCACGTCTTCCATGAGTTGAGCGACAGTTGCGAACCCACGATGTTCTCGCTCGAGCAACTGTTGATCGCAGTCGCGGGCGACCCACGCGCACCAGCCAGTCTCCTGCAACTTGTGCACACGACCCTCGCAACAATCGTGGAGGACGAGTTGCAGCGTCGCCGCGACTTGTCGTGGCTCGGCGTTCCTATAACGACAGCGACGCGACCGCCTCACAAGAAAAAGCCGGCGGGCGCTTGGAATGACGAGTGCGAAGTGTGTCGGACTACTTTGTATCTATCTAAGGTTACGGGGTTGACTGACAAGAAATCCGCCGTTTGCCTGAAGCATGCTATCCGCCTGTTGACTTCGGAAAAAACAAAGCGTGAAATCACTGGGCTATCCCTCGTCGAGTTTTTAACGAAGGACCAACTTCAAGATGTCATGACCAAATTGCAGGACCGATTCTGCCCAACTTAA
- Protein Sequence
- MQGQMSAKWDKVQAQRKFAQGAYIPPHHNNNVSAERRCEGHEKPAPPPAIVQNMSAVSLLDQVSFHNLHYHDRKMQPVVRLERLPRIQPDRTPRILRRVSIATDSTTAIPLLYRRQVWPHSKLGYVDFYLQNMYPTDLCYKDSKIYLWSAWSACLTDSTTAIPLLYRRQVWPHSKLGYVDFYLQNLYPTDLCYKDSKIYLWSAWSACLTDSTTAIPLLYRRQVWPHSKLGYVDFYLQNLYPTDLCYKDSKIYLWSAWSACLTDSTTAIPLLYRRQVWPHSKLGYVDFYSLNLYPTDLCYKDSKIHLWSAWSACLTDSTTAIPLLYRRQVWPHSKLGYVDFYLQNMYHTHQYYNDRKIYPWSAWSACLTDSTNAIPADQTTELRNRVILKKNPRQLSKKKVSRNLRTRRMVTRRKRTCCRDDTDTEDETPLKYLAASSPLDPPGRSFPKDSDGPSTSKDSSGFYSADNIERWISGAAQSTSQFKVPLPPRPKAAKHPGRQFQRDEMLMIPTVEDSMEIPEIPPSPSNAGCDKIERMSPTISTSSCYQQNDDEDQKVEPESLVTVAPCPSERYVTIKDVVNASQEERKLRCSICDFCKRAYKVEQLSQVFRESADDGEASNMVIWQSKPSRSSDDKQQTSNYVYLDILPGVSNLVIQIQYTVIPNQKKPILQARIVSKSEAESINECNLIENESLFEQLVEFLDAKMLKRYRTILLDALAAEKRSAEGETSRPKRSRPKLKAKITRKVAARGKPYDFKSAAKLTKFSSNSNKYVDNSSNSAVNSSKSAVNSSKSAVSSSKSAVSTSKFAASTSKSAVNSSKTAVNSTKSVVNSSKTVVNSSKSVVNSSKSAGNSNKSSASTSKSGANVASPGPAPAVAGPAVGGALPGASTSASPAAFPETPAAERKPSAAVRDAPVYYPTEQEFCDPVAYFEKIMPTASKFGICKVVAPASFKPKCTVNDKIRFNVANQYVARLYTRWGPASREMCAIKAHLASQRVPFTRSPILDSLEVDLPKLYHTVQKLGGLKKVIEKKLWGRVAENMRFSKRPQLEKRLDDIYVRYLLPYDTLSTQERDDIRAEVNKGWYKKNTKIVRRSLNPLHRQKQLLGESGTSASDTEDESDVAGALTEAEDCIVSGRRMTLANFMKVAQAVKDQYFPDNPEPTPREVEDEYWRIVLLAQEHICVNTASIDTGEEGYGFPKGKQDPYGKHPWNPKMISQNPGNVLSMLGPVLGVTVPTLHLGMMFSTSCWHSDPHGLPWIEYMHSGPAKIWYGIPDDQSAAFRGAVESLCQTSCQNKSIWLPSDITMIPPHFLLLSQVSLTRVEQNPGEYIIVFPKAYSSSISTGYTQSESVYFATNSWLKTVDHVFHELSDSCEPTMFSLEQLLIAVAGDPRAPASLLQLVHTTLATIVEDELQRRRDLSWLGVPITTATRPPHKKKPAGAWNDECEVCRTTLYLSKVTGLTDKKSAVCLKHAIRLLTSEKTKREITGLSLVEFLTKDQLQDVMTKLQDRFCPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -