Atra011047.1
Basic Information
- Insect
- Amyelois transitella
- Gene Symbol
- -
- Assembly
- GCA_032362555.1
- Location
- CM063562.1:3845363-3845920[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3 1.3e+03 0.1 0.1 30 44 80 94 75 118 0.59 2 2 1.3e-08 1.3e-05 25.7 10.5 3 51 124 172 122 177 0.92
Sequence Information
- Coding Sequence
- ATGTCTTCTTCCGTTGACCCGCGACCAGAAACACAAGAACAACCTCTGGACTTAACAAAAAAGTCCTGTATTCCTCAAACGCAACCTGCCACTTACTACGTTTATTCCCACCTACCGAGGCAGCCTTCATATGAATATATTTACCAAGCACCGTACACCGTGCCATCGCCATTAATTACGCCACCAGAAACCGCCAACAGGCCGTCATCGTCAGTGCAGTGCAGTGATACTGAATCATTGGCTGAGGATGTAGAATATCTAGAATTTGAGAGGGACGCTCTACATGCGATGGCGGAGAGGAATGGCGGGAGATTGCTGAGTGACAACCCGCGCATGCGTCGAGCCGTTCAAGGTAGTGGTGAAGGCGATGACACTTACAGGAAACAGAGGGAAAGGAACAATGTGGCGGCTAAACAGAGCAGAGACAGAAGGAAGTTGAGGGAGATGCGGCTCACTCTGCAGGTGacgtttttgaaaaaaaagttacgCCAAATGAAAGCAAGAGAAAAATTACTGTGCGGGAGATGTCGTGTACAGGTAATTCCGAATTCGATCTAA
- Protein Sequence
- MSSSVDPRPETQEQPLDLTKKSCIPQTQPATYYVYSHLPRQPSYEYIYQAPYTVPSPLITPPETANRPSSSVQCSDTESLAEDVEYLEFERDALHAMAERNGGRLLSDNPRMRRAVQGSGEGDDTYRKQRERNNVAAKQSRDRRKLREMRLTLQVTFLKKKLRQMKAREKLLCGRCRVQVIPNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -