Atra011061.1
Basic Information
- Insect
- Amyelois transitella
- Gene Symbol
- -
- Assembly
- GCA_032362555.1
- Location
- CM063562.1:3943311-3943862[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4 1.4e+03 -0.0 0.0 41 56 107 122 81 126 0.60 2 2 4.7e-09 4.7e-06 27.1 7.8 3 50 129 176 127 178 0.88
Sequence Information
- Coding Sequence
- ATGTCTTTGTGGACTCCTTACGCTGAACCGCGATCGGTAACACCTCTGGATTTGACATCAAAGTCCAACACTCAAGCGAAACCTGTAGCTAGTTCCGCATCTCATTATGCCGAAACACCAAGGCAGCTTTTAAATCAAATACCCGGGCAGTACTTTTACACGCCACTGTACACTGTGCCATCGCCTCTAATTACTCCGCCGGAAACTGCCACCAACAGGCCGCCATCGTCAGAGCACAGTGACACAGAATCCTTGAATGACGATGTCGAATACATGGAATTCGAAAGGGATGCTCTACAGGCGATGGCAGAGAGGAATGGAGGCAGGCTTCTGGGAGAAAACCCGCGCATGCGCCGAGCCGTACAGGGAAGCGTGGAAGGCGACGACTCCTACCGAAAACAGAGGGAGAGGAACAACATTGCGGCAAAACAAAGCAGGGACAGGAGAAAGTTGCGGGAAATGCGACTAACACTACAGGTGAcgtttctaaaaaaaaagatacggGCAATGAAGGCAAGAGAAAAATTATTGTGTGGGAGATGTCGTATATAA
- Protein Sequence
- MSLWTPYAEPRSVTPLDLTSKSNTQAKPVASSASHYAETPRQLLNQIPGQYFYTPLYTVPSPLITPPETATNRPPSSEHSDTESLNDDVEYMEFERDALQAMAERNGGRLLGENPRMRRAVQGSVEGDDSYRKQRERNNIAAKQSRDRRKLREMRLTLQVTFLKKKIRAMKAREKLLCGRCRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -