Atra003735.1
Basic Information
- Insect
- Amyelois transitella
- Gene Symbol
- Xbp1
- Assembly
- GCA_032362555.1
- Location
- CM063552.1:10862409-10863539[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-17 1.7e-14 54.1 11.5 2 63 44 105 44 107 0.94 2 2 0.00019 0.19 12.4 0.4 32 55 88 111 87 115 0.91
Sequence Information
- Coding Sequence
- ATGAGCGCCCCTATCATCATCACCGTTCCTAACAACTACCTGGCGGTGGAGGAGATGGACTCCAACGTGGTTTTGGACGTCTCACCTTCTCCGCCGTCCAGGAAACGGCGCCTGGACCATCTTACGTGGGAAGAGAAAATGCAAAGAAAGAAACTAAAGAACAGAGTGGCAGCGCAAACATCGCGCGACAGGAAAAAGGCTAAAATGGACGAAATGGAGCATCGTTTGAAGCAGTTTATGGATATGAATGAGAAGTTGATGAGCGAGGTTGCGAGTTTAAAAGCGCTGAACGAGCGGCTTTTGAGCGAGAATGCAGCGCTTCGCAGCGAGTCGGCGGCGCGGAGCGTCGCGGGGGCCCCAGGACCGGCAGCGTCTCCTCAGCAGAAGGAAGGGCCCCCGCCGGCGATCCGCGCGGCGCGGCTGCTGCTGGCGATATGCCTGCTCTCACAGACCTCCTCGCTCACCTCGACTCCGAAGAGTACCTTGACAGCCTCCATCAACTTGCAGACTCCTTATTACAAGAAATTAGCGCAAGTACTTCAGGAGCGGTTGAAGATGTCCCAGTCCAGCAATCTGGAGAGTGTGCTGAAAGAAATCAAGTGGTGGGGACCGCAACAGAGCACATGGAACCCAGTGAAAGTGCAGTCGTAG
- Protein Sequence
- MSAPIIITVPNNYLAVEEMDSNVVLDVSPSPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEHRLKQFMDMNEKLMSEVASLKALNERLLSENAALRSESAARSVAGAPGPAASPQQKEGPPPAIRAARLLLAICLLSQTSSLTSTPKSTLTASINLQTPYYKKLAQVLQERLKMSQSSNLESVLKEIKWWGPQQSTWNPVKVQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00818104;
- 90% Identity
- iTF_00011676;
- 80% Identity
- -