Atra019895.1
Basic Information
- Insect
- Amyelois transitella
- Gene Symbol
- -
- Assembly
- GCA_032362555.1
- Location
- CM063577.1:738954-741741[+]
Transcription Factor Domain
- TF Family
- Nrf1
- Domain
- Nrf1_DNA-bind domain
- PFAM
- PF10491
- TF Group
- Basic Domians group
- Description
- In Drosophila, the erect wing (ewg) protein is required for proper development of the central nervous system and the indirect flight muscles. The fly ewg gene encodes a novel DNA-binding domain that is also found in four genes previously identified in sea urchin, chicken, zebrafish, and human [1]. Nuclear respiratory factor-1 is a transcriptional activator that has been implicated in the nuclear control of respiratory chain expression in vertebrates. The first 26 amino acids of nuclear respiratory factor-1 are required for the binding of dynein light chain. The interaction with dynein light chain is observed for both ewg and Nrf-1, transcription factors that are structurally and functionally similar between humans and Drosophila [2]. The highest level of expression of both ewg and Nrf-1 was found in the central nervous system, somites, first branchial arch, optic vesicle, and otic vesicle. In the mouse Nrf-1 protein, Swiss-Prot:Q8C4C0 there is also an NLS domain at 88-116, and a DNA binding and dimerisation domain at 127-282. Ewg is a site-specific transcriptional activator, and evolutionarily conserved regions of ewg contribute both positively and negatively to transcriptional activity [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.0068 38 4.5 0.2 183 205 37 59 24 61 0.89 2 20 0.0051 28 4.9 0.2 182 205 72 95 65 97 0.86 3 20 0.0051 28 4.9 0.2 182 205 108 131 101 133 0.86 4 20 0.0051 28 4.9 0.2 182 205 144 167 137 169 0.86 5 20 0.0051 28 4.9 0.2 182 205 180 203 173 205 0.86 6 20 0.0051 28 4.9 0.2 182 205 216 239 209 241 0.86 7 20 0.0051 28 4.9 0.2 182 205 252 275 245 277 0.86 8 20 0.0051 28 4.9 0.2 182 205 288 311 281 313 0.86 9 20 0.0051 28 4.9 0.2 182 205 324 347 317 349 0.86 10 20 0.0051 28 4.9 0.2 182 205 360 383 353 385 0.86 11 20 0.0051 28 4.9 0.2 182 205 396 419 389 421 0.86 12 20 0.0051 28 4.9 0.2 182 205 432 455 425 457 0.86 13 20 0.0051 28 4.9 0.2 182 205 468 491 461 493 0.86 14 20 0.0051 28 4.9 0.2 182 205 504 527 497 529 0.86 15 20 0.0051 28 4.9 0.2 182 205 540 563 533 565 0.86 16 20 0.0051 28 4.9 0.2 182 205 576 599 569 601 0.86 17 20 0.0051 28 4.9 0.2 182 205 612 635 605 637 0.86 18 20 0.0051 28 4.9 0.2 182 205 648 671 641 673 0.86 19 20 0.0051 28 4.9 0.2 182 205 684 707 677 709 0.86 20 20 0.0051 28 4.9 0.2 182 205 720 743 713 745 0.86
Sequence Information
- Coding Sequence
- ATGCGCAGGAGATTCGGACTCGTGCGCTCCTTGTCTTTCTTCGTCCACACCGCTCCCACTAGTTCTGTGGtaaagattagaGAAAGCACCAGCTGGTACAGCTGGAACTCCAGCAGCGTGAGCTGGCGCCAGGCTCTGCCCCAGCACTGCGCCGCCTGCTACAACAGTAGTGGCAGGGTCTCACCCGAGGGCCGCACCAGCCGGTACAGCTGGAACTCCAGCAGCGTGAGCTGGCGCCAGGCTCTGCCCCAGCACTGCGCCGCCTGCTACAACAGTAGTGGCAGGGTCTCACCCGAGGGCCGCACCAGCCGGTACAGCTGGAACTCCAGCAGCGTGAGCTGGCGCCAGGCTCTGCCCCAGCACTGCGCCGCCTGCTACAACAGTAGTGGCAGGGTCTCACCCGAGGGCCGCACCAGCCGGTACAGCTGGAACTCCAGCAGCGTGAGCTGGCGCCAGGCTCTGCCCCAGCACTGCGCCGCCTGCTACAACAGTAGTGGCAGGGTCTCACCCGAGGGCCGCACCAGCCGGTACAGCTGGAACTCCAGCAGCGTGAGCTGGCGCCAGGCTCTGCCCCAGCACTGCGCCGCCTGCTACAACAGTAGTGGCAGGGTCTCACCCGAGGGCCGCACCAGCCGGTACAGCTGGAACTCCAGCAGCGTGAGCTGGCGCCAGGCTCTGCCCCAGCACTGCGCCGCCTGCTACAACAGTAGTGGCAGGGTCTCACCCGAGGGCCGCACCAGCCGGTACAGCTGGAACTCCAGCAGCGTGAGCTGGCGCCAGGCTCTGCCCCAGCACTGCGCCGCCTGCTACAACAGTAGTGGCAGGGTCTCACCCGAGGGCCGCACCAGCCGGTACAGCTGGAACTCCAGCAGCGTGAGCTGGCGCCAGGCTCTGCCCCAGCACTGCGCCGCCTGCTACAACAGTAGTGGCAGGGTCTCACCCGAGGGCCGCACCAGCCGGTACAGCTGGAACTCCAGCAGCGTGAGCTGGCGCCAGGCTCTGCCCCAGCACTGCGCCGCCTGCTACAACAGTAGTGGCAGGGTCTCACCCGAGGGCCGCACCAGCCGGTACAGCTGGAACTCCAGCAGCGTGAGCTGGCGCCAGGCTCTGCCCCAGCACTGCGCCGCCTGCTACAACAGTAGTGGCAGGGTCTCACCCGAGGGCCGCACCAGCCGGTACAGCTGGAACTCCAGCAGCGTGAGCTGGCGCCAGGCTCTGCCCCAGCACTGCGCCGCCTGCTACAACAGTAGTGGCAGGGTCTCACCCGAGGGCCGCACCAGCCGGTACAGCTGGAACTCCAGCAGCGTGAGCTGGCGCCAGGCTCTGCCCCAGCACTGCGCCGCCTGCTACAACAGTAGTGGCAGGGTCTCACCCGAGGGCCGCACCAGCCGGTACAGCTGGAACTCCAGCAGCGTGAGCTGGCGCCAGGCTCTGCCCCAGCACTGCGCCGCCTGCTACAACAGTAGTGGCAGGGTCTCACCCGAGGGCCGCACCAGCCGGTACAGCTGGAACTCCAGCAGCGTGAGCTGGCGCCAGGCTCTGCCCCAGCACTGCGCCGCCTGCTACAACAGTAGTGGCAGGGTCTCACCCGAGGGCCGCACCAGCCGGTACAGCTGGAACTCCAGCAGCGTGAGCTGGCGCCAGGCTCTGCCCCAGCACTGCGCCGCCTGCTACAACAGTAGTGGCAGGGTCTCACCCGAGGGCCGCACCAGCCGGTACAGCTGGAACTCCAGCAGCGTGAGCTGGCGCCAGGCTCTGCCCCAGCACTGCGCCGCCTGCTACAACAGTAGTGGCAGGGTCTCACCCGAGGGCCGCACCAGCCGGTACAGCTGGAACTCCAGCAGCGTGAGCTGGCGCCAGGCTCTGCCCCAGCACTGCGCCGCCTGCTACAACAGTAGTGGCAGGGTCTCACCCGAGGGCCGCACCAGCCGGTACAGCTGGAACTCCAGCAGCGTGAGCTGGCGCCAGGCTCTGCCCCAGCACTGCGCCGCCTGCTACAACAGTAGTGGCAGGGTCTCACCCGAGGGCCGCACCAGCCGGTACAGCTGGAACTCCAGCAGCGTGAGCTGGCGCCAGGCTCTGCCCCAGCACTGCGCCGCCTGCTACAACAGTAGTGGCAGGGTCTCACCCGAGGGCCGCACCAGCCGGTACAGCTGGAACTCCAGCAGCGTGAGCTGGCGCCAGGCTCTGCCCCAGCACTGCGCCGCCTGCTACAACAGTAGTGGCAGGGTCTCACCCGAGGGCCGCACCAGCCGGTACAGCTGGAACTCCAGCAGCGTGAGCTGGCGCGCCAGCTCCAGCGGGTGCAGCGCCAGCGGGTGCCACGCGAAGCGCTCGGGCTCCGCCACGTGCCGCAGCACGCCCGGCGGCGCGCGGTTGAACACGTGTGACACGCCGCCCGCCTGTACATACATTGTCTCATATATAGATAACACCCTCGTAAgtcttcaaaattttaatgatttattctaa
- Protein Sequence
- MRRRFGLVRSLSFFVHTAPTSSVVKIRESTSWYSWNSSSVSWRQALPQHCAACYNSSGRVSPEGRTSRYSWNSSSVSWRQALPQHCAACYNSSGRVSPEGRTSRYSWNSSSVSWRQALPQHCAACYNSSGRVSPEGRTSRYSWNSSSVSWRQALPQHCAACYNSSGRVSPEGRTSRYSWNSSSVSWRQALPQHCAACYNSSGRVSPEGRTSRYSWNSSSVSWRQALPQHCAACYNSSGRVSPEGRTSRYSWNSSSVSWRQALPQHCAACYNSSGRVSPEGRTSRYSWNSSSVSWRQALPQHCAACYNSSGRVSPEGRTSRYSWNSSSVSWRQALPQHCAACYNSSGRVSPEGRTSRYSWNSSSVSWRQALPQHCAACYNSSGRVSPEGRTSRYSWNSSSVSWRQALPQHCAACYNSSGRVSPEGRTSRYSWNSSSVSWRQALPQHCAACYNSSGRVSPEGRTSRYSWNSSSVSWRQALPQHCAACYNSSGRVSPEGRTSRYSWNSSSVSWRQALPQHCAACYNSSGRVSPEGRTSRYSWNSSSVSWRQALPQHCAACYNSSGRVSPEGRTSRYSWNSSSVSWRQALPQHCAACYNSSGRVSPEGRTSRYSWNSSSVSWRQALPQHCAACYNSSGRVSPEGRTSRYSWNSSSVSWRQALPQHCAACYNSSGRVSPEGRTSRYSWNSSSVSWRQALPQHCAACYNSSGRVSPEGRTSRYSWNSSSVSWRQALPQHCAACYNSSGRVSPEGRTSRYSWNSSSVSWRASSSGCSASGCHAKRSGSATCRSTPGGARLNTCDTPPACTYIVSYIDNTLVSLQNFNDLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -