Basic Information

Insect: Amphipyra tragopoginis
Gene Symbol: -
Assembly: GCA_905220435.1
Location: HG992020.1:8643266-8644468[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.019 14 4.8 0.0 14 27 40 53 27 65 0.85

2 9 0.042 30 3.7 0.0 13 43 92 119 87 120 0.81

3 9 4.6 3.3e+03 -2.8 1.1 18 28 170 180 157 193 0.70

4 9 0.85 6e+02 -0.5 0.8 14 25 194 205 183 210 0.75

5 9 0.32 2.3e+02 0.9 0.1 18 29 226 237 223 249 0.81

6 9 1.2e-05 0.0083 15.1 0.2 14 43 252 278 243 279 0.91

7 9 0.0099 7.1 5.7 2.5 5 26 272 293 272 295 0.90

8 9 0.0011 0.75 8.8 1.8 14 38 309 330 298 334 0.82

9 9 0.00051 0.37 9.8 5.1 13 44 336 364 325 364 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.019	14	4.8	0.0	14	27	40	53	27	65	0.85
2	9	0.042	30	3.7	0.0	13	43	92	119	87	120	0.81
3	9	4.6	3.3e+03	-2.8	1.1	18	28	170	180	157	193	0.70
4	9	0.85	6e+02	-0.5	0.8	14	25	194	205	183	210	0.75
5	9	0.32	2.3e+02	0.9	0.1	18	29	226	237	223	249	0.81
6	9	1.2e-05	0.0083	15.1	0.2	14	43	252	278	243	279	0.91
7	9	0.0099	7.1	5.7	2.5	5	26	272	293	272	295	0.90
8	9	0.0011	0.75	8.8	1.8	14	38	309	330	298	334	0.82
9	9	0.00051	0.37	9.8	5.1	13	44	336	364	325	364	0.85

Sequence Information

Coding Sequence: ATGAATACCGTGGAGGACAAATATAAGAAAATGGAGGTTGCCCGTAAGCTATTGATAAAGCGCCGCAATGTAGAGTATGTGTTACAATATAGTAATGTTACACCCTTCATGTGGCATAAGGGGAAGTACAAATGTTTCTATTGCAACGAAACAACGAAAGACCCGGTCTCACTACGAGAACACACGAGTGACGCGCACCAATTCGCTAATCTAGAACTCGTAGTTTTCGATAGAACGAAGAACAATCGAAATAAAGACGCCGCAGTCAAAATTGACGTCACCGGAATTTCGTGCAAGCTCTGTCCTCAAGTTGTAACGAATCTGGAAGAGTTAATCCATCATCTGATCATAGCACATGACGCAGAGTATGACGTCAGTGTACCAAATTGTCTGCTACCCTTCAAATTGGATAGAGATCAACCAACATGTCCCACCTGCAATATGAAGTTCGTTTTCTTTGAATATCTACTGCGACACGCGAACAAGCATCACCTCTCTCACCACTATATTTGTGACGTATGTGGTACCAGTTTCCAAGGAGAGAATCATTTAAAAATGCACTATAGATACTACCACAGGGAAGGGGGTTACACCTGCGAGTACTGTAGCACCAGTCTTGCAACTCTCTCCAAAAAGATTCTACACGAGAAAAACGTACATTTGGTCAACTTATCCACTTGCCCGCATTGCCCAGAAACATTCAAAAGTTCGTATCTAAAGAAGCTTCATTTGGCCAACGTTCATGGAGTTGAAGAACTGAAAATTAAATGTCCTTACTGTCCAAAAGTTTACCCACAAGAATCAATAATGTCTAGACACATGAGAAGAGTGCATTTGagagaaaaaaatgttgaatGCGAAGTTTGCGGGGATAAATTCTTCGGGCCTTATGACGTCAAACTGCACATGGTGAAACACAACGGGGAGAAGAAGTTCGTTTGCTCTGTTTGCGGGAAGAACTTCTCCAAAAGAAGTAACTTAAACTCCCATTCTGTTCTTCATACCCGAGAAAAAGACTATGCGTGTGAGATTTGCAACAAAGCATTCGCACATCAGACGAATTTGAGGATGCACATCAGAAATAGACATAGTCACTTCGATCAGACTCCAATTGTAGACGAAATTGATGACAACGAGATGGTGCAGATGGAAATAATTCAAGAGGAATTAGAAGCTGATGTTGCAGGACAATATAttcaatga
Protein Sequence: MNTVEDKYKKMEVARKLLIKRRNVEYVLQYSNVTPFMWHKGKYKCFYCNETTKDPVSLREHTSDAHQFANLELVVFDRTKNNRNKDAAVKIDVTGISCKLCPQVVTNLEELIHHLIIAHDAEYDVSVPNCLLPFKLDRDQPTCPTCNMKFVFFEYLLRHANKHHLSHHYICDVCGTSFQGENHLKMHYRYYHREGGYTCEYCSTSLATLSKKILHEKNVHLVNLSTCPHCPETFKSSYLKKLHLANVHGVEELKIKCPYCPKVYPQESIMSRHMRRVHLREKNVECEVCGDKFFGPYDVKLHMVKHNGEKKFVCSVCGKNFSKRSNLNSHSVLHTREKDYACEICNKAFAHQTNLRMHIRNRHSHFDQTPIVDEIDDNEMVQMEIIQEELEADVAGQYIQ*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01285796;
90% Identity: iTF_00925098;
80% Identity: iTF_00072270;