g3924.t1
Basic Information
- Insect
- Amphipyra tragopoginis
- Gene Symbol
- rcor2
- Assembly
- GCA_905220435.1
- Location
- HG992002.1:9944373-9949265[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-10 4.8e-07 28.8 0.0 3 46 127 170 125 170 0.97 2 2 5.1e-12 3.9e-09 35.4 0.0 3 46 398 441 396 441 0.97
Sequence Information
- Coding Sequence
- ATGGTTTTAGCCGAAAGAAGTAATGATGTTCGAAACGGGAAGCGGTCAAGGGGGCCAAGCCCCAATGGCCATGGAAGTCCAGATTCCAGTTCTGAAGACGAGAATGCTGAGAAAATCAGGGTGGGTAGAGATTATCAGGCAGTGTGCCCTGAACTGGAACCGGTTGATCAACGCAGACCTGAACTTATATCTGACAGAGCTTTGTTGGTTTGGTCACCAACTTGTGACATATCTGACATCAAATtgGATGAATACATCACCACAGCAAAAGAGAAATATGGGTATAATGGGGAACAAGCACTGGGAATGTTATTCTGGCACAAACATGACCTCAACAGGGCTTCCATGGACCTTGCCAACTTTACTCCTTTCCCTGATGAATGGACTGTTGAAGATAAGGTGCTTTTTGAACAGGCTTTTCAGTTTCATGGCAAAAGCTTTCACAGAATACGACAAATGtTGCCAGACAAATCAATTGCATCATTAGTTAAATACTATTACTCGTGGAAGAAAACAAGAGCTCGTACTTCACTGATGGACGTAGTCAGTGAAGGTCGCAATGCAACCAGTTCAGGAACTGGCAAGCGTGAATCAGGTGCCGGATCTGAGCCCGGAGGCTCCGACAAAGACTCTGATAATGACGAAAAGAAGTGGACTTTCCACCGTGGTATTGTCCGAGGAGGGAAGTCCCTCGCGGCAGGCGGGGCTCCGCATCGCGCCGCCGGCCAGCAGGGCGCCCAGGGCGAGGGCGGCGGCGAGAACGCGGGCAAGTGGTGCACTGTGTGCGGCATTCTGTGCAACCAGATCACGGCGCACAATTCGCAGAAGTTGTGTCAGGCATGCCTCGTGCACGCCAGACGCACGGGGACGATGAGACCGCTGTGCGGACCGTCCGGAAGACGCGGTCCGGGTTCAAAACAGCAGCGGTACAAGCACCGGTTGCCGCGTGGCATTTACATCAATCACGATGATCTCGTCGCCATGGCGACCGGCCCCCAGCCAGGCGATCCCCCGCAGCCCGGACTTGTCAATCAGGGCGAAGCCATGCTCAAAGCTATGGACAGAGAAATTATATCTCTAAAGAGACAAGTACAACAGAATAAGCAGCAACTGAGTGCGATGAAGCGCAAGGTAGGCGACACTGGCGTGGAAGAGTTGAGGCCCGGTGAGCCACCCGCAAAGATAAACTCGCGCTGGACCAACGACGAACTACTCATGGCGGTGACGGCTGTTAGGAAATACGGCAGGGACTTCCAAGCGATCGCCGAGACGCTGGGCACGAAGACTGAAGCGCACGTACGTTCCTTCTTCATTTCCTATCGGCGTCGATACAACCTGGATGCCATGGTGCGCGAACATGAGGCCGAACGCGGTAACGCGCATCATATACAAGCCGGAACCACAAGCACGGAATCTGCTGAAACAGGGGACAATGCTAATAATGGGACAGGCTCTCCCCAATCTACGAATAAGGATGAAAAAaCGGAGGTAGACAGTGAGGGAGTTGCCATCGGCGCGTCGGCGGAAGCGGGCGGGCCGCCCACCACGCCGCCTAAACACAAGCCTGCCAAGTGA
- Protein Sequence
- MVLAERSNDVRNGKRSRGPSPNGHGSPDSSSEDENAEKIRVGRDYQAVCPELEPVDQRRPELISDRALLVWSPTCDISDIKLDEYITTAKEKYGYNGEQALGMLFWHKHDLNRASMDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRARTSLMDVVSEGRNATSSGTGKRESGAGSEPGGSDKDSDNDEKKWTFHRGIVRGGKSLAAGGAPHRAAGQQGAQGEGGGENAGKWCTVCGILCNQITAHNSQKLCQACLVHARRTGTMRPLCGPSGRRGPGSKQQRYKHRLPRGIYINHDDLVAMATGPQPGDPPQPGLVNQGEAMLKAMDREIISLKRQVQQNKQQLSAMKRKVGDTGVEELRPGEPPAKINSRWTNDELLMAVTAVRKYGRDFQAIAETLGTKTEAHVRSFFISYRRRYNLDAMVREHEAERGNAHHIQAGTTSTESAETGDNANNGTGSPQSTNKDEKTEVDSEGVAIGASAEAGGPPTTPPKHKPAK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00018116;
- 90% Identity
- iTF_01075386;
- 80% Identity
- -