Basic Information

Insect: Amphipoea oculea
Gene Symbol: -
Assembly: GCA_945859585.1
Location: CAMAOF010000183.1:3612008-3628740[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0022 0.18 12.7 2.9 1 23 307 329 307 329 0.98

2 7 0.54 43 5.2 2.1 1 23 336 358 336 358 0.86

3 7 6.9e-05 0.0055 17.4 0.4 2 23 365 386 364 386 0.96

4 7 2.4e-05 0.0019 18.9 3.5 1 23 392 414 392 414 0.98

5 7 0.00016 0.013 16.3 2.1 1 23 420 442 420 442 0.96

6 7 1.1e-05 0.00086 20.0 0.9 1 23 448 470 448 470 0.97

7 7 5e-06 0.0004 21.0 0.9 1 23 487 510 487 510 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0022	0.18	12.7	2.9	1	23	307	329	307	329	0.98
2	7	0.54	43	5.2	2.1	1	23	336	358	336	358	0.86
3	7	6.9e-05	0.0055	17.4	0.4	2	23	365	386	364	386	0.96
4	7	2.4e-05	0.0019	18.9	3.5	1	23	392	414	392	414	0.98
5	7	0.00016	0.013	16.3	2.1	1	23	420	442	420	442	0.96
6	7	1.1e-05	0.00086	20.0	0.9	1	23	448	470	448	470	0.97
7	7	5e-06	0.0004	21.0	0.9	1	23	487	510	487	510	0.97

Sequence Information

Coding Sequence: ATGGCCGAAACGAGTACAATGAACTCCGATAATAAAGTGGAGCAGATCGAGAAGAAGGAAGACATGGAGGGCATCAAGACGGAGGCGGATGTGCTGGTGAAGCACGAGCAGCTGGAGTGCGTGGCGTGCACGACGCGCAGCCTAGAGTGCGTGGACATCTACTGCACCACGACTCGCGTGTCCGGCGCCAAGCTCAGCACCTTCTTGCACAAGTTCACGCAGATGGACCTGTCCGGCCACACCGCCTGCAAGTTCATGTGCAAAAGCTGCTACGACCTCATCAACGTGCTCGAGCAGGCCGAGATAGAGTACGTCAAGTTGAAGGAGACTTTCGAAGCCATCCTCAGCAAGAACCCTCTGTTTGATTCTCAAACAGTCCAGCCCATCCGGTTGTCAGACGTGAAGGCAGAGTTTGATGCTGCTGATGATGATGACGACTATGTGTGTGACAATGTGGATGATGACGACTCAGATGACGAACCATTGGCCACTCAGAGCAAACGAAAGAGATACAAAGTTGAGAAAAAAAAGAAAAAAATATCCACAAACAAACGTAAAGTGAGAAGTAAAACCAGCGGTGACAGTTGGAAATGTGAGGACTGTGGAGCAAAGGGTACAACAGGAGGGGTCATTGGCCTGACGGCTCACAAGCTGGCTGTGCACACAATGGACGACCCTTCTGTCTTGCTGCCAGAGGTCAAGATCGAGAACTCTGCTGAAGGATCACAAAGTCCCCTATACAACAATGGATTTGGTAACTGTCTAAAAGTCGAGAGAGAAAACTATGATGAAGACGATGACAGTTTGGGTGTTGACGACCTTAGCAATGACATGCAACCTATCGAGAAAAAAATAGGCAGACCATTAAAGACTAAGATAATACCGGCACAGCCCAGGAAGAAGAAGATCAAAGTGGTGCATCAGTGTGACCAGTGCGATGCTAAATATACTTCTTTATCACGCTTGGAGCAGCACAAACAAAAGCACGACGGCTCCAAACCGCCCTACATTTGCGAGGTGTGCGGCGCGCACTACAAGCACAAGCGAGCCTGCGACATACACATCGCGCTACATAAAGGTATAAGTGACTGGAAATGTGAAGAGTGCAATAAGTTATTCCCATCTAAGAATGCTCTACAGAGGCATAACAACATACATACGGGCAAACTGAACTATCAGTGCGACTTATGCGGCAAGTCGTTCATCCACACGTCGTCGTTCAAGATGCACAAGCTGTCGCACTCGGGCGTGAAGCCGCACGCGTGCGACGTGTGCGGCTTGGCGCTCATGACGCGCTCGCACCTCAAGCGGCACAAGCGCGTGCACTCCGGCGAGAAGCGCCACGAGTGTGCCGTGTGCGGGAAGAGGTTCTCCGAGAGGTACAACCTGGCGGCACACAGCAAGTCGCACGAGGCGGGCGAGGCGGCGCCGGCGCGCGAGTTGCCGCGCCGGCGCCTGTTCCGCTGCACCTTCTGTCCCGAGCGCTTCGAGCGTCGGTACATGCTGGAGCGTCACATGTCGGTTGTACACGGGCGCACACTGGAGCGGCCGCCGCCCACGCCGCGCAACACCATGAGCAAGCTGCTCAAGGCACAGGCACAGCGCCGCGACCTGCCCGCCGGTGTCGATGTCGACACGAAAGACGATCGAAGTTCAGACTCACGCACCACGCCAATCACACCTCAGAAACTAATTGCGCAATTATCATCTTCAAGTTCCATAGCGCAGAGCGCGTGGGGCAGCTCGTACGCGGCCGAGTTCCTGCGGCACGAGTACCCGCACTGA
Protein Sequence: MAETSTMNSDNKVEQIEKKEDMEGIKTEADVLVKHEQLECVACTTRSLECVDIYCTTTRVSGAKLSTFLHKFTQMDLSGHTACKFMCKSCYDLINVLEQAEIEYVKLKETFEAILSKNPLFDSQTVQPIRLSDVKAEFDAADDDDDYVCDNVDDDDSDDEPLATQSKRKRYKVEKKKKKISTNKRKVRSKTSGDSWKCEDCGAKGTTGGVIGLTAHKLAVHTMDDPSVLLPEVKIENSAEGSQSPLYNNGFGNCLKVERENYDEDDDSLGVDDLSNDMQPIEKKIGRPLKTKIIPAQPRKKKIKVVHQCDQCDAKYTSLSRLEQHKQKHDGSKPPYICEVCGAHYKHKRACDIHIALHKGISDWKCEECNKLFPSKNALQRHNNIHTGKLNYQCDLCGKSFIHTSSFKMHKLSHSGVKPHACDVCGLALMTRSHLKRHKRVHSGEKRHECAVCGKRFSERYNLAAHSKSHEAGEAAPARELPRRRLFRCTFCPERFERRYMLERHMSVVHGRTLERPPPTPRNTMSKLLKAQAQRRDLPAGVDVDTKDDRSSDSRTTPITPQKLIAQLSSSSSIAQSAWGSSYAAEFLRHEYPH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00908327;
90% Identity: iTF_00364415;
80% Identity: -