Basic Information

Insect: Amphipoea oculea
Gene Symbol: -
Assembly: GCA_945859585.1
Location: CAMAOF010000271.1:322473-324503[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.065 5.2 8.1 0.4 2 23 351 373 350 373 0.92

2 10 0.12 9.7 7.2 1.6 1 23 379 401 379 401 0.98

3 10 0.73 59 4.8 4.6 1 23 407 430 407 430 0.97

4 10 0.0007 0.056 14.3 0.2 1 20 435 454 435 456 0.94

5 10 0.0043 0.34 11.8 1.4 2 23 470 491 469 491 0.97

6 10 0.43 34 5.5 0.5 2 23 498 518 497 518 0.93

7 10 6e-05 0.0048 17.6 0.3 1 23 524 546 524 546 0.99

8 10 1.4e-07 1.1e-05 25.9 0.8 1 23 552 574 552 574 0.96

9 10 5.7e-07 4.6e-05 24.0 3.8 1 23 580 602 580 602 0.97

10 10 0.00057 0.046 14.5 3.8 1 23 608 631 608 631 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.065	5.2	8.1	0.4	2	23	351	373	350	373	0.92
2	10	0.12	9.7	7.2	1.6	1	23	379	401	379	401	0.98
3	10	0.73	59	4.8	4.6	1	23	407	430	407	430	0.97
4	10	0.0007	0.056	14.3	0.2	1	20	435	454	435	456	0.94
5	10	0.0043	0.34	11.8	1.4	2	23	470	491	469	491	0.97
6	10	0.43	34	5.5	0.5	2	23	498	518	497	518	0.93
7	10	6e-05	0.0048	17.6	0.3	1	23	524	546	524	546	0.99
8	10	1.4e-07	1.1e-05	25.9	0.8	1	23	552	574	552	574	0.96
9	10	5.7e-07	4.6e-05	24.0	3.8	1	23	580	602	580	602	0.97
10	10	0.00057	0.046	14.5	3.8	1	23	608	631	608	631	0.98

Sequence Information

Coding Sequence: ATGAATAACACAAAAGATGCAATGTACTGTCGCCTTTGCGCCGAGTTAAAACAACATAATAGACTTACAAACCTGCAAACTGACGAAAAAACGTGCCAGAAAGTCGTTAATATACTGTCAAGATTCAATATAGTAATGGATTTCAAGGAAAATATACTGCCAAAGACTGTCTGCTTAATATGTGTAAAATCCTTGGAACGAGCATTTGCTTTCGTAACTGCAGTAGAACAGGCGCAGGAATTTTTAAGCGACTTTATTCTAGTACAAATAAATACTGTTGCAAGTGATTCTAGTGCTGAAAACATTTTGTATGAGCCTCCAGATAATGAAAACTATATTGATGACTGTAAACACGAACACAGTGGAGATTCAATGGAAATAAATGATGATGTTACAAATTCAAGTGAAGAATGTGATAGTGAGGTCATGACTGAGGTGTGTAATGATTTTGATTGTTCTGTGATTAATGAAAACACTGAAGAACATATTAAAATTGAGAATAAGCATGATATACTACCTTCTAATGAAATTATTGAAGAAAATATGAATGTAAAAGATAAATGTGTTGAACTGCCTGATTTATTTCATGTTGAAGATGATAAAAACATCTTAAAAGAAAAAGAAATCAAGTCTGAAGGAATTCTATTAGACAGTACAGCTTGTTCTGCAGATTACATAAATAATCAAAATGATAGGAATGAAAACAAGTATGAGCTTCCAGATAATGAAAACGGTGTTGTTGGCTGTAAAGACCAACACAGTCAAGATTTTATGGAAGTAAATAACGATGGTACAAATTTAAGTGAAAAGAATAGTTTTGTGGGCGCCGAAAATATGGATAAAGGTTTACAACAATTACAACCTCAACATGAAGAACACAATTCTAAACGAATTCAACCCAAACGATCGGCTACTTCAGTACATTCTAAAACTAACATAAATAAAATATCAGAAACCAAAAAAATTAAAGAAAATAATAGTAAGCCATCTGCAAAAAATACAGACAAAGATGTGGAACATGTAATAATGACATGGAAGGAGTATGAATGGAAGTGTTATTTTTGTGAAAAACTATTCCCGAGCATTGAGGAGCTACAGCAACATTCAATGCAGTACCACAATACCTGTAACGCTTACAAATGCATCGACTGTGGAACCAGAAGGTCAGTTCTCAAAACGTTTTTGAAACATGTTCGTAAACACAAAAATTACTTACGTTATTCTTGCTATAGATGCTGCAAGAAATTCCCTGAAATGCATGAATTATGGCTCCATATGAAGAAAGTTCACAAAAAATCTGACTATGTGTGCCTGGGATGCAACACTTCTTTTTACAGTAACAGAGAATTAAAAGAACATGTTGAGAAATATTACAAACAAGTGAATACAAAAGTACCATTTGATTTAACATGCACTATATGCAATAAAAAAAATGAAACTGCTAAAGATTTTCGGAGACATTTACTTACTCACAAAAACAGAAAAAAGTGTGTTTGTGAAACTTGTGGCAAAATCATTCTTAAAAGTTATTTAGCAGGACATATGCTTCAGCATTCCGATTTGAGGCCATTCCAATGTGAGATATGCAAATCTTCCTTCAAATCTGCAATAGGATTACGCCTTCACATTTCTACTCATGATGGAGTGAAACCGTTTTCTTGTGACCAATGTGGCAAAAGCTTCAGACGTAAAAGTCAACTTAACAGTCATGCTATAATCCACACGGACTCACATCCTCATGTTTGCACATACTGTGACAAGAGTTTCCGTTCCAAGACACTACTCAATCAACACATACGTCAACACACTGGAGTAAAACCTTATTCTTGTACTGTCTGTCAACGCGACTTCACGAACTGGCCGAATTGTAACAAGCATATGAAACGCAGACATGCTACAGATATGACGAAGAAGAAACGGACTTCTGGCGGGACGTACCCTATTAAACCAGTTACAGGAGAGGTTGTAGTTGCTGACGAGGAGAAAATAAGGGAATACAAGAAGAGGATGATGATAAAAGAAAATACGTAG
Protein Sequence: MNNTKDAMYCRLCAELKQHNRLTNLQTDEKTCQKVVNILSRFNIVMDFKENILPKTVCLICVKSLERAFAFVTAVEQAQEFLSDFILVQINTVASDSSAENILYEPPDNENYIDDCKHEHSGDSMEINDDVTNSSEECDSEVMTEVCNDFDCSVINENTEEHIKIENKHDILPSNEIIEENMNVKDKCVELPDLFHVEDDKNILKEKEIKSEGILLDSTACSADYINNQNDRNENKYELPDNENGVVGCKDQHSQDFMEVNNDGTNLSEKNSFVGAENMDKGLQQLQPQHEEHNSKRIQPKRSATSVHSKTNINKISETKKIKENNSKPSAKNTDKDVEHVIMTWKEYEWKCYFCEKLFPSIEELQQHSMQYHNTCNAYKCIDCGTRRSVLKTFLKHVRKHKNYLRYSCYRCCKKFPEMHELWLHMKKVHKKSDYVCLGCNTSFYSNRELKEHVEKYYKQVNTKVPFDLTCTICNKKNETAKDFRRHLLTHKNRKKCVCETCGKIILKSYLAGHMLQHSDLRPFQCEICKSSFKSAIGLRLHISTHDGVKPFSCDQCGKSFRRKSQLNSHAIIHTDSHPHVCTYCDKSFRSKTLLNQHIRQHTGVKPYSCTVCQRDFTNWPNCNKHMKRRHATDMTKKKRTSGGTYPIKPVTGEVVVADEEKIREYKKRMMIKENT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00071793; iTF_00071796; iTF_00746085; iTF_00746107; iTF_00746174; iTF_00071761; iTF_00071767; iTF_00758560;
90% Identity: iTF_00071793;
80% Identity: -