Aocu019813.1
Basic Information
- Insect
- Amphipoea oculea
- Gene Symbol
- Jarid2
- Assembly
- GCA_945859585.1
- Location
- CAMAOF010000213.1:5070-17571[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.7 1e+03 0.6 0.0 53 89 156 187 114 187 0.69 2 3 9.2e-18 1.3e-14 54.7 0.0 13 89 337 411 326 411 0.90 3 3 1.3 1.9e+03 -0.3 0.0 54 89 1061 1091 1039 1091 0.72
Sequence Information
- Coding Sequence
- ATGGTAGTAACTATACACGGCAAAGAGGTCCTGGGGGTTGGTTTGGTCCCGAAAAATGAATCTCTGATAAACAAAGAGTTTTCGTTGGAGGAGCGCGAACATTTACTTGACCAAATTATTGAGAGCCTGACAGTCTATCCAGACGTCAATTTTGAGGGTCGGGACGTAAATTTGGTTTGTCGAGACGTCAATTTGGAAGATAGAGAAGTCAATTTGGAGGTTCGACACGACAACATAGAGGGTCGAAACGACAATTTGGAGAGGCAAAACGACATTCCGGATATTCTTAGCATATCATCCGACAGCACTGCTGAGATGAGCGATTCTACGACTGAGGACGAAAAGACGCCATCCCGCCTTACAGCTGAGAAAAGACGGTTAAAGCGCATGGCTGTTAAAAAGTTGGCTATGATGCGTGAGTGCATGAGAAAGGAAAAGGAAAGAGAGATTGCCCGCGTCGAGGAAGAGAAGAGACAGGAAATATCACGGATTATGGCGGAGCAGAGTAACGTTGTCTCGCAGATGTCCCGCCAATACCGCGAGTGCGTTACCCATTTTGAGAAGGAGAAACTTAGAGGTTATGCTCTCCTCACGGAAAAGGTCACACAAGACGTGATATCTAAAATAAAGGCTGATAAATTTGTCGACGGCATGGCGGCGAACCTTGACAAAGAAATGGATGCCAAGAAAATGGATCTGGATGAACTTTTAGATCAAGAGGCGCCTGGCACCAGCAGCTCCATTCTGCCAACGGATGGCGGGTTGCTTGTAGAAGCTCCTGTATACCACCCTACCGAGGAAGATTTTCTTGATCCAGTTCGCTTCTATGAGAAGATCTGGCCAGAAGCAGTTAGATTTGGCATCTGTAAGGTGGTGCCCCCTCCTGGTTGGAAGCCACCCTTTCGAGTGCATGATGAAATGAGGTTCGAGGTTACGAACCAATACATTTCGCGATTGTTCAACCGCTGGGGACCGGCCGCGAGAGAACTTTGCGCGATCAAGTTGTCTTTGGCCCAACAAAAAGTTAATTTTACACGACCACCTTTGCTGGATGGTATCGAGGTAAACTTACCAAAATTATACCACCTCGTGCAACGACACGGCGGTCTAGAAACAGTATATAACAAGAAGCGATGGGGCAAAGTCGCAGAAGACATGAAATTTAATAAAGGGCCTAACACTGAGATCCTAAGGAAACTCGACCAGATTTACAAGTATCTGCTGCCATACGACACGCTTTCTCATCAGGAGCGCCAGGATATTATGCGGAAAGTCGAGATCGCATGGAACCGAAAGAATCAAAAGCTTTTGGACCGCGCCTTGAACCCGCTAAACCGCCAGCAGCGATTGCTTGGCTTAATAGACTCTTCTGACGATGAGACAGAAGATGAAGACACTGCGGCCGCTGTCAATGAGGCAGAAGACTGTATCATCAAGGGCGCGGTCATGAACCGAGCTAAATTCAGAAAGATTGCCACCATGACGTACGAGAACACATTCGGACAAGGTTCGGAGGCCGCCGACCCTCCCGATTTGGACAAAATCGAGGAGTACTACTGGCGCCTCGTGACGCTGGGCACCGAGCATGTGTGCGTGCACGCCGCGAACGTTGACACCGGCGAAGAAGGCTACGGCTTTATCAAAAATAAATCCGACTCCTATGGACGCCACCCTTGGAATCCTAAGATGGTTAGCCAGAATCCTCGCAACGTGCTTAAGTATTTGGGTCCGGTTCTGGGCGCAACGGTGCCTACTCTGCTTCTAAGAATGCTATTCTCGACATCCTGCTGGCACAAGGATCCGCATGTAGTAGCCTGGCTTGAGATTCTACTCTTAGGACCCGAAAAGATCTGGTACGGCATCCCAGCTGATCAGGCAGATAAATTCAGGAAAGCTGTAGAAACTTTATGCCCCACATCTTGCCAAAACAAGTTTCACTGGCTGTCGACGGACATCACGATGATTCCGCCGAACTTGCTGCGCGAGCACAATGTGACGCTGTCTCGCATCACGCAGAGGGAGGGCGAATACATCCTGGCGTTCCCGAACGCCTACACCTGCTGCATCAGCACCGGCTACACTGAATCGGAGAGTGTATATTTCGCACCGCCATCATGGCTTGAGAATCTGTGGACAGTTTTCAAGGAGGCCCGACAGAGTTGCGAGCCGACAATGTTCCCAATGGAACATCTGCTCTACAATATAGGCAAAGACCCAAAAGTTGACCCCACTATACTGAAAAGCGCCCAGCCGTTATTCGACAAAATGCTGCGCGAAGAGGTCACCAACAGGCAGATGCTGCAAGAGCGGGGACTGCCCTTTGTGCAGGAGGTATCAGTAACATTAACCTTATCCGCTTGTAATAACTTTACAGAAAACTCGCCTTGTGCCGCGGCAGCGTGTCGCTCTGACAAGGACGTCATAAACGCATCGAAAGAATTCCTGGACTCACGCTGCAAAGTGTGTAAGCCTTGCATCAGAATTGACAAACTGATGCAAGTTTCGGCTTTACTAGAATCTCAAATTGGATTATCGAACAAGGGCCGGCAAAACAAAACTGCTGTTCAAGAGAAGGAACCAACAGAAAGAGAAGGTGAAACAGAAGAAGTTGAACTAGAAAAAGACTACGAAGACGCAAAATCGACTAATGAAGACCCAGGTAATATTTACTTGCTATTACCAAACCAATCTTCGTTAATGATGAAATCAAGAGCCAACGTGGTACACGGCAAAGAGGTCTTGGGGGTTGGTTTGGTCCCGAAAAATGAATCTTTGATAAACAAAGAGTTTTCGTTGGAGGAGCGCGAACATTTACTTGACCAAATTATTGAGAGCCTGACAGTCTATCCAGACGTCAATTTTGAGGGTCGGAACGTAAATTTGGTTTGTCGAGACGTCAATTTGGAAGATAGAGAAGTCAATTTGGAGGTTCGACACGACAACATAGAGGGTCGAAACGACAATTTGGAGAGGCAAAACGACATTCCGGATATTCTTAGCATATCATCCGACAGCACTGCTGAGATGAGCGATTCTACGACTGAGGACGAAAAGACGCCATCCCGCCTTACAGCTGAGAAAAGACGGTTAAAGCGCATGGCTGTTAAAAAGAAGTTGGCTATGATGCGTGAGCGCATGAGAAAGGAAAAGAAAAGAGAGATTGCCCGCGTCGAGGAAGAGAAGAGACAGGAAATATCACGGATTATGGCGGAGCAGAGTAACGTTGTCTCGCAGATGTCCCGCCAATACCGCGAGTGCTTTACCCATTTTGAGAAGGAGAAACTAAGAGGTTATGCTCTCCTCACGGAAAAGGTCACACAAGACGTGATATCTAAAATAAAGGCTGATAAATTTGTCGACGGCATGGCGGCGAACCTTGACAAAGAAATGGATGCCAAGAAAATGGATCTGGATGAACTTTTAGATCAAGAGGCGCCTGGCACCAGCAGCTCCATTCTGCCAACGGATGGCGGGTTGCTTGTAGAAGCTCCTGTATACCACCCTACCGAGGAAGATTTTCTTGTAATGGGGCTTACTGGGAGAAACACAGTTCTATGTCTAGAACACGCACTCAAATTACTAGACACGGAAAAATACAAGGACATGGACATAGATCAACTAAAAGTTCTGGTGCATGTGAGTGTGAAAGAACTCAACAACGTGCACGACGACATGAAGCGTCGCCTTGGTATCCCGAACGACTAA
- Protein Sequence
- MVVTIHGKEVLGVGLVPKNESLINKEFSLEEREHLLDQIIESLTVYPDVNFEGRDVNLVCRDVNLEDREVNLEVRHDNIEGRNDNLERQNDIPDILSISSDSTAEMSDSTTEDEKTPSRLTAEKRRLKRMAVKKLAMMRECMRKEKEREIARVEEEKRQEISRIMAEQSNVVSQMSRQYRECVTHFEKEKLRGYALLTEKVTQDVISKIKADKFVDGMAANLDKEMDAKKMDLDELLDQEAPGTSSSILPTDGGLLVEAPVYHPTEEDFLDPVRFYEKIWPEAVRFGICKVVPPPGWKPPFRVHDEMRFEVTNQYISRLFNRWGPAARELCAIKLSLAQQKVNFTRPPLLDGIEVNLPKLYHLVQRHGGLETVYNKKRWGKVAEDMKFNKGPNTEILRKLDQIYKYLLPYDTLSHQERQDIMRKVEIAWNRKNQKLLDRALNPLNRQQRLLGLIDSSDDETEDEDTAAAVNEAEDCIIKGAVMNRAKFRKIATMTYENTFGQGSEAADPPDLDKIEEYYWRLVTLGTEHVCVHAANVDTGEEGYGFIKNKSDSYGRHPWNPKMVSQNPRNVLKYLGPVLGATVPTLLLRMLFSTSCWHKDPHVVAWLEILLLGPEKIWYGIPADQADKFRKAVETLCPTSCQNKFHWLSTDITMIPPNLLREHNVTLSRITQREGEYILAFPNAYTCCISTGYTESESVYFAPPSWLENLWTVFKEARQSCEPTMFPMEHLLYNIGKDPKVDPTILKSAQPLFDKMLREEVTNRQMLQERGLPFVQEVSVTLTLSACNNFTENSPCAAAACRSDKDVINASKEFLDSRCKVCKPCIRIDKLMQVSALLESQIGLSNKGRQNKTAVQEKEPTEREGETEEVELEKDYEDAKSTNEDPGNIYLLLPNQSSLMMKSRANVVHGKEVLGVGLVPKNESLINKEFSLEEREHLLDQIIESLTVYPDVNFEGRNVNLVCRDVNLEDREVNLEVRHDNIEGRNDNLERQNDIPDILSISSDSTAEMSDSTTEDEKTPSRLTAEKRRLKRMAVKKKLAMMRERMRKEKKREIARVEEEKRQEISRIMAEQSNVVSQMSRQYRECFTHFEKEKLRGYALLTEKVTQDVISKIKADKFVDGMAANLDKEMDAKKMDLDELLDQEAPGTSSSILPTDGGLLVEAPVYHPTEEDFLVMGLTGRNTVLCLEHALKLLDTEKYKDMDIDQLKVLVHVSVKELNNVHDDMKRRLGIPND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -