Aocu019814.1
Basic Information
- Insect
- Amphipoea oculea
- Gene Symbol
- JARID2
- Assembly
- GCA_945859585.1
- Location
- CAMAOF010000213.1:17958-51105[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2 2.8e+03 -0.9 0.0 54 89 1175 1205 1159 1205 0.74 2 2 6.7e-20 9.7e-17 61.5 0.1 13 89 1355 1428 1344 1428 0.90
Sequence Information
- Coding Sequence
- ATGGCTAGGGCACGCTCACGCCGTGTTCAGGCGCAGCGCAAGTTCGCGCAGGGCGCTTACGTGCCGCCGAATACTGTCGCCGTCGCTGCTGCCGACAACAGGCGGGACGCCGCGCAAGATCCAAGAAATGTTACCATGAATAACATGACGGCTACGGGCTTACTGGACGTCGTGTCTCTACAGAGTCACTCCCATTTGACTTCACAACCTGTAGTAATCATTGAGAGGCTGCGCGGCAGTAACCTGACCCGCGACGTGCAGCCGGGCCCATCGCAGAGAGAAATGTTAGAAGCACGACCTTGGGAATACCCTCATGAACGTGTGAATAACAATGTGGCCACAATCAAGAAACCTGCTGCGCCACCAATGTTGCAGACTGTTAAAATAAAGAAAGAATATAAAAGAGACCATCCTATGGCGCTAAGATATCGGCGCCCGAGCAAGCTTGAATTAAACAGGCTTATAGCTGAAACTAGTGCCCCTCCCAGAAAGGTGGCATCGAAGCGCAAAAAGAACTCTTCTGACGAGGATGAACCCCTCATATTCCAGAAAACTCGCCTAAAGCAGGCAGCAGAACAACTGAGCATTTCAAAACAGACCGCTGCCAGGGACAGTACTCCCAAGGAGAAATCTCCTAAAAATAAACCTTGCAAGAAGAGATCTAAAAAGGAGATCACCACAAACGAGGTCACCACACACGAGACCACTACAAAGGAGATCACCACAAACGAGGTCACCACACACGAGACCACTACAAAGGAGATCACCACAAGCAAGACCACTACAAAGAAAATTATCACAAACGAGATCTGTCTAAAAGAGACTGATCGAAAGAATACCAAGCAAAGTATAGCTAGGAAAACTCCCATGAAAAGGACTCGGCAAAAAAGGATTCATAAGAAATGCTCTCCCAAGCAGCCTGCGCATGTCGCGCCAGGGTGCTCCGTACCAAAGTCTTCCATACCAGATTTCACAATAACCGTCATGAAGGAAGAACTTACTGATGAAACGATCATCCAGAACGATAAAGCAGATCTGGGCACCCCAAATGAATCGGTTATCGAAATCGTCCCGAATGACCCGATATTCCCAGAAGTCCTGGATAATCTCGTTGCCCCTGTTGTCCCAGTCACCACGGATGACTTAGTTATCCCACCCGTCCAAGCACTGCCGGATTTCGCGGATGTTCCGTTGCTGGATTCATTTGTGGAAGCAGATGGTAGTTTGGACAAAGTACTGTCGAATTTAGATGAAGTGTTCGAGGAGGAGGGTATTGATTACAGAAAACATGATGATGAAGCAATGGATAAAGTTCAGAAGAGCCCAAAACCAGTAACGACGTTTTGGCATATTATACCGGAACCCAAAGAGCGTTTTCCCGAGGGCCGCCCGGATGACAAACCGATGATCAAGAATCATGTTCCGGAAGTCCCGGTTGACAAACCACTAAGTTTGCATGATGCACCGATGGCAAACAATGATTTGAACGTGCAGATGACCAACGTTCAAGTTCCGGAAGACACGGGTGATGAACCCAACAAAGATAATATTCTAGAGGACACAAGTGATTCTGATGTCTCATTGGCCCGGGAAGACATGATGGATTCGCCGATACCAGAAAACTGTGTTTCTGAGGACCCGGTTGACGAAAGTAGTTTGCATGATGCACCTCCAATGACCAATGTTCATGTTCCGGAGGACACGGGTGATGAACCCAACAACGATAATATTCCAGAGGACACCAGTGCCTCTGATGTCTCATTGGCCCGGGAAGACATGATGGATTCGCCGATACCAGAAAACTGTGTTCCTGAGGACCCGGTTGACGAAAGTAGTTTGCATGATGCACCTCCAATGACCAACATTCATATTCCGGAAGACACGGGTGAGGAACCCAACAACGATAATATTCCAGAGGACACAAGTGACTGTGATGTCTTATTGGCCCGGAAGGATGGGATGGATTCGCCGATACCAGAAAACTGTGTTCCTGAGGACCCGGTTGACGAAAGTAGTTTGCATGATGCACCTCCAATGACCAACATTCGTGTTCCGGAGGACACCGGTGATGAACCCAACAACGATAATATTCCAGAGGACACAAGTGAATGTGATGTCTCATTGGCCCGGGAGGACATGATGGATTCGCCGATACCAGAAAACTGTGTTCCTGAGGACCCGGTTGACGAAAGTAGTTTGCATGATGCACCTCCAATGACCAACATTCGTGTTCCGGAGGACACGGGTGATGAACCCAACAACGATAATACTCCAGAGGACACCAGTGCCTCTGATGTCTCATTGGCCCAGGAAGACATGATGGATTCGCCGATACCAGAAAACTGTGTTCCTGAGGACCCGGTTGACGAAAGTAGTTTGCATGATGCACCTCCAGTGACCAACATTCATATTCCGGAAGACACGGGTGATGAACCCAACAACGATAATACTCCAGAGGACACAAGTGACTGTGATGTCTCATTGGCCCGGGAGGATGAGATGGATTCGGCGATACCAGAAAACTGTGTTCCTGAGGACCCGGTTGACGAAAGTAGTTTGCATGATGCACCTCCAATGACCAACATTCGTGTTCCGGAGGACACGGGTGATGAACCCAACAACGATAACATTCCAGAGGACACAAGTGACTGTGATGTTTCATTGGCCCGGGAGGACGTGATGGATTCGCCGATTACGAACCTACGAGatCCTGAGGCGCCGACACCTTGTGCCGCGGCAGCGTGTCGCTCTGACAAGGACGTCATAAACGCATCGAAAGAATTCCTGGACTCACGCTGCAAAGTGTGTAAGCCTTGCATCAGAATTGACAAACTGATGCAAGTTTCGGCTTTACTAGAATCTCAAATTGGATTATCGAACAAGGGCCGGCAAAACAAAGCTGCTGTTCAAGAGAAGGAACCAACAGAAAGAGAAGGTGAAACAGAAGAAGTTGAACTAGAAAAAGACTACGAAGACGCAAAATCGACTAATGAAGACCCAGGTAATATTTACTTGCTATTACCAAACCAATCTTCGTTAATGATGAAATCAAGAGCCAACGTGGTACACGGCAAAGAGGTCTTGGGGGTTGGTTTGGTCCCGAAAAATGAATCTCTGATAAACAAAGAGTTTTCGTTGGAGGAGCGCGAACATTTACTTGACCAAATTATTGAGAGCCTGACAGTCTATCCGGACGTCAATTTTGAGGGTCGGGACGTAAATTTGGTTTGTCGAGACGTCAATTTGGAAGATAGAGAAGTCAATTTGGAGGTTCGACACGACAACATAGAGGGTCGAAACGACAATTTGGAGAGGCAAAACGACATTCCGGATATTCTTAGCATATCATCCGACAGCACTGCTGAGATGAGCGATTCTACGACTGAGGACGAAAAGACGCCATCCCGCCTTACAGCTGAGAAAAGACGGTTAAAGCGCATGGCTGTTAAAAAGAAGTTGGCTATGATGCGTGAGCGCATGAGAAAGGAAAAGGAAAGAGAGATTGCCCGCGTCGAGGAAGAGAAGAGACAGGAAATATCACGGATTATGGCGGAGCAGAGTAACGTTGTCTCGCAGATGTCCCGCCAATACCGCGAGTGCGTTACCCATTTTGAGAAGGAGAAACTAAGAGGTTATGCTCTCCTCACGGAAAAGGTCACACAAGACGTGATATCTAAAATAAAGGCTGATAAATTTGTCGACGGCATGGCGGCGAACCTTGACAAAGAAATGGATGCCAAGAAAATGGATCTGGATGAACTTTTAGATCAAGAGGCGCCTGGCACCAGCAGCTCCATTCTGCCAACGGATGGCGGGTTGCTTGTAGAAGCTCCTGTATACCACCCTACCGAGGAAGATTTTCTTGATCCAGTTCGCTTCTATGAGAAGATCTGGCCAGAAGCAGTTAGATTTGGCATCTGTAAGGTGGTGCCCCCTCCTGGTTGGAAGCCACCCTTTCGAGTGCATGATGAAATGAGGTTCGAGGTTACGAACCAATACATTTCGCGATTGTTCAACCGCTGGGGATCGGCCGCGAGAGAACTTTGCGCGATCAAGTTGTCTTTGGCCCAACAAAAAGTTAATTTTACACGACCACCTTTGCTGGATGGTATCGAGGTAAACTTACCAAAATTATACCACCTCGTGCAACGGCACGGCGGTCTAGAAACAGTATATAACAAGAAGCGATGGGGCAAAGTCGCAGAAGACATGAAATTTAATAAAGGGCCTAACACTGAGAGGAAACTCGACCAGATTTACGTGAAGTATCTGCTGCCATACGACACGCTTTCTCATCAGGAGCGCCAGGATATTATGCGGAAAGTCGAGATCGCATGGAACCGAAAGAATCAAAAGCTTTTGGACCGCGCCTTGAACCCGCTAAACCGCCAGCAGCGATTGCTTGGCTTAATAGACTCTTCTGACGATGAGACAGAAGATGAAGACACTGCGGCCGCTGTCAATGAGGCAGAAGACTGTATCATCAAGGGCGCGGTCATGAACCGAGCTAAATTCAGAAAGAGTCCTCCTGGCCTACAGATTGCCACCATGACGTACGAGAACACATTCGGACAAGGTTCGGAGGCCGCCGACCCTCCCGATTTGGACAAAATCGAGGAGTACTACTGGCGCCTCGTGACGCTGGGCACCGAGCATGTGTGCGTGCACGCCGCGAACGTTGACACCGGCGAAGAAGGCTACGGCTTTATCAAAAATAAATCCGACTCCTATGGACGCCACCCTTGGAATCCTAAGATGGTTAGCCAGAATCCTCGCAACGTGCTTAAGTATTTGGGTCCGGTTCTGGGCGCAACGGTGCCTACTCTGCTTCTAGGAATGCTATTCTCGACATCCTGCTGGCACAAGGATCCGCATGTAGTAGCCTGGCTTGAGATTCTACTCTTAGGACCCGAAAAGATCTGGTACGGCATCCCAGCTGATCAGGCAGATAAATTCAGGAAAGCTGTAGAAACTTTATGCCCCACATCTTGCCAAAACAAGTTTCACTGGCTGTCGACGGACATCACGATGATTCCGCCGAACTTGCTGCGCGAGCACAATGTGACGCTGTCTCGCATCACGCAGAGGGAGGGCGAATACATCCTGGCGTTCCCGAACGCCTACACCTGCTGCATCAGCACCGGCTACACTGAATCGGAGAGTGTATATTTCGCACCGCCATCATGGCTTGAGAATCTGTGGACAGTTTTCAAGGAGGCCCGACAGAGTTGCGAGCCGACAATGTTCCCAATGGAACATCTGCTCTACAATATAGGCAAAGACCCAAAAGTTGACCCCACTATACTGAAAAGCGCCCAGCCGTTATTCGACAAAATGCTGCGCGAAGAGGTCACCAACAGGCAGATGCTGCAAGAGCGGGGACTGCCCTTTGTGCAGGAGTTGCTGAGCGCCACCTCATCACGTAGGAAGAACACAGCACACCCGTTCAACCCGCGCGATCAAGACGAGTGCGAGTACTGCAGGGCCACGTTGTACCTCTCGAAGGTAATTGGGCTTACAGGGAGAAACACAGTTCTATGTCTAGAACACGCACTCAAATTACTAGACACGGAAAAATACAAGGACATGGACATAGATCAACTAAAAGTTCTGGTGCATGTGAGTGTGAAAGAACTCAACAACGTGCACGACGACATGAAGCGTCGCCTTGGTATCCCGAACGACTAA
- Protein Sequence
- MARARSRRVQAQRKFAQGAYVPPNTVAVAAADNRRDAAQDPRNVTMNNMTATGLLDVVSLQSHSHLTSQPVVIIERLRGSNLTRDVQPGPSQREMLEARPWEYPHERVNNNVATIKKPAAPPMLQTVKIKKEYKRDHPMALRYRRPSKLELNRLIAETSAPPRKVASKRKKNSSDEDEPLIFQKTRLKQAAEQLSISKQTAARDSTPKEKSPKNKPCKKRSKKEITTNEVTTHETTTKEITTNEVTTHETTTKEITTSKTTTKKIITNEICLKETDRKNTKQSIARKTPMKRTRQKRIHKKCSPKQPAHVAPGCSVPKSSIPDFTITVMKEELTDETIIQNDKADLGTPNESVIEIVPNDPIFPEVLDNLVAPVVPVTTDDLVIPPVQALPDFADVPLLDSFVEADGSLDKVLSNLDEVFEEEGIDYRKHDDEAMDKVQKSPKPVTTFWHIIPEPKERFPEGRPDDKPMIKNHVPEVPVDKPLSLHDAPMANNDLNVQMTNVQVPEDTGDEPNKDNILEDTSDSDVSLAREDMMDSPIPENCVSEDPVDESSLHDAPPMTNVHVPEDTGDEPNNDNIPEDTSASDVSLAREDMMDSPIPENCVPEDPVDESSLHDAPPMTNIHIPEDTGEEPNNDNIPEDTSDCDVLLARKDGMDSPIPENCVPEDPVDESSLHDAPPMTNIRVPEDTGDEPNNDNIPEDTSECDVSLAREDMMDSPIPENCVPEDPVDESSLHDAPPMTNIRVPEDTGDEPNNDNTPEDTSASDVSLAQEDMMDSPIPENCVPEDPVDESSLHDAPPVTNIHIPEDTGDEPNNDNTPEDTSDCDVSLAREDEMDSAIPENCVPEDPVDESSLHDAPPMTNIRVPEDTGDEPNNDNIPEDTSDCDVSLAREDVMDSPITNLRDPEAPTPCAAAACRSDKDVINASKEFLDSRCKVCKPCIRIDKLMQVSALLESQIGLSNKGRQNKAAVQEKEPTEREGETEEVELEKDYEDAKSTNEDPGNIYLLLPNQSSLMMKSRANVVHGKEVLGVGLVPKNESLINKEFSLEEREHLLDQIIESLTVYPDVNFEGRDVNLVCRDVNLEDREVNLEVRHDNIEGRNDNLERQNDIPDILSISSDSTAEMSDSTTEDEKTPSRLTAEKRRLKRMAVKKKLAMMRERMRKEKEREIARVEEEKRQEISRIMAEQSNVVSQMSRQYRECVTHFEKEKLRGYALLTEKVTQDVISKIKADKFVDGMAANLDKEMDAKKMDLDELLDQEAPGTSSSILPTDGGLLVEAPVYHPTEEDFLDPVRFYEKIWPEAVRFGICKVVPPPGWKPPFRVHDEMRFEVTNQYISRLFNRWGSAARELCAIKLSLAQQKVNFTRPPLLDGIEVNLPKLYHLVQRHGGLETVYNKKRWGKVAEDMKFNKGPNTERKLDQIYVKYLLPYDTLSHQERQDIMRKVEIAWNRKNQKLLDRALNPLNRQQRLLGLIDSSDDETEDEDTAAAVNEAEDCIIKGAVMNRAKFRKSPPGLQIATMTYENTFGQGSEAADPPDLDKIEEYYWRLVTLGTEHVCVHAANVDTGEEGYGFIKNKSDSYGRHPWNPKMVSQNPRNVLKYLGPVLGATVPTLLLGMLFSTSCWHKDPHVVAWLEILLLGPEKIWYGIPADQADKFRKAVETLCPTSCQNKFHWLSTDITMIPPNLLREHNVTLSRITQREGEYILAFPNAYTCCISTGYTESESVYFAPPSWLENLWTVFKEARQSCEPTMFPMEHLLYNIGKDPKVDPTILKSAQPLFDKMLREEVTNRQMLQERGLPFVQELLSATSSRRKNTAHPFNPRDQDECEYCRATLYLSKVIGLTGRNTVLCLEHALKLLDTEKYKDMDIDQLKVLVHVSVKELNNVHDDMKRRLGIPND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -